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Prunus subg. Prunus

January 01, 1970

Prunus subg. Prunus is a subgenus of Prunus. This subgenus includes plums, apricots and bush cherries. Some species conventionally included in Prunus subg. Amygdalus are clustered with plum/apricot species according to molecular phylogenetic studies.[1][2] Shi et al. (2013) has incorporated subg. Amygdalus into subg. Prunus, thereby including almonds and peaches in this subgenus.[1] The species in this subgenus have solitary flowers or 2–3 in a fascicle.[1][3]

Prunus subg. Prunus
Plums and nectarines
Scientific classification
Kingdom: Plantae
Clade: Tracheophytes
Clade: Angiosperms
Clade: Eudicots
Clade: Rosids
Order: Rosales
Family: Rosaceae
Genus: Prunus
Subgenus: Prunus subg. Prunus
Section

See text.

Sections according to Shi et al. (2013) edit

Shi et al. (2013) divide subg. Prunus into seven sections: sect. Amygdalus, sect. Armeniaca, sect. Emplectocladus, sect. Microcerasus, sect. Persicae, sect. Prunocerasus and sect. Prunus. They form three clades. The basal clade is sect. Emplectocladus which is sometimes treated as a subgenus. The other two clades are the Amygdalus-Persicae clade (sometimes treated as subg. Amygdalus) and the Armeniaca-Microcerasus-Prunocerasus-Prunus clade (subg. Prunus in a narrow sense).[1]

Sect. Emplectocladus edit

Prunus sect. Emplectocladus (Torr.) A.Gray is the sister group to all the other species in this subgenus,[1] and sometimes treated as a distinct subgenus, Prunus subg. Emplectocladus (Torr.) S.C.Mason. It includes six New World species.[4][5]

Sect. Amygdalus & Sect. Persica edit

Prunus sect. Amygdalus (L.) Benth. & Hook.f. and Prunus sect. Persica (Mill.) Nakai[a] sometimes constitute Prunus subg. Amygdalus (L.) Focke. They form a monophyletic clade together, but the boundary between them seems not very distinct. A few species, such as P. spinosissima (thorny almond) and P. kansuensis (Gansu peach), are clustered in either sect. Amygdalus or sect. Persica in different studies.[2][6] The word "ămygdălus" is Latin for the almond nut.[7]

Sect. Amygdalus includes most Old World almond species except P. mongolica, P. tangutica, P. triloba, P. pedunculata, P. tenella, P. petunnikowii and probably other related species.[2]

Selected species:

Sect. Persica includes peach species[8] as well as two species previously considered almonds (P. mongolica and P. tangutica).[2]

Sect. Armeniaca edit

Main article: apricot

Species in this Prunus sect. Armeniaca (Scop.) Koch are apricots, native to Eurasia.[1]

Selected species:

Sect. Microcerasus edit

Main article: Prunus sect. Microcerasus

Species in Prunus sect. Microcerasus (Webb & Berthel.) C.K.Schneid. are known as bush cherries or dwarf cherries.[1]

Selected species:

Sect. Prunocerasus edit

Main article: Prunus sect. Prunocerasus

Prunus sect. Prunocerasus Koehne includes New World plums and peachbush (P. texana).[2][1]

Selected species:

Sect. Prunus edit

Main article: Prunus sect. Prunus

Prunus sect. Prunus includes Old World plums.[1]

Selected species:

Additional sections edit

Species of the following sections were not presented in the results of Shi et al. (2013). Therefore, their relationship with the sections proposed by Shi et al. (2013) is unclear.

Sect. Chamaeamygdalus edit

Prunus sect. Chamaeamygdalus (Spach) Dippel used to be included in the Amygdalus-Persica clade. However, molecular phylogenetic research indicates that it should be excluded from the Amygdalus-Persica clade.[2] The phylogenetic positions of the species in this section are still uncertain.

Sect. Louiseania edit

Prunus sect. Louiseania (Carrière) Yazbek includes two or three Asian species.[9] Although they are called flowering almond, they are more related to bush cherries (sect. Microcerasus) and apricots (sect. Armeniaca).[2][6][10][11][12][13][14][15][16] According to nuclear phylogenomic analyses, the type species of sect. Louiseania, P. triloba, is embedded in sect. Microcerasus and closely related to the P. prostrata, the type species of sect. Microcerasus. However, in the phylogenetic tree based on plastid genome, P. triloba together with P. tomentosa (also a member of sect. Microcerasus) and apricots is in a clade that is sister to the core part of sect. Microcerasus.[14][16]

Sect. Penarmeniaca edit

Prunus sect. Penarmeniaca S.C.Mason is the sister group to New World plums, P. texana and probably the Old World species P. tenella.[2] It includes two New World species.[4][17]

Notes edit

  1. ^ Shi et al. (2013) gave this section a new name, Prunus sect. Persicae (T.T.Yü & L.T.Lu) S.L.Zhou.

References edit

  1. ^ a b c d e f g h i Shi, Shuo; Li, Jinlu; Sun, Jiahui; Yu, Jing; Zhou, Shiliang (2013). "Phylogeny and classification of Prunus sensu lato (Rosaceae)". Journal of Integrative Plant Biology. 55 (11): 1069–1079. doi:10.1111/jipb.12095. ISSN 1744-7909. PMID 23945216.
  2. ^ a b c d e f g h Yazbek, M.; Oh, S.-H. (2013-10-01). "Peaches and almonds: phylogeny of Prunus subg. Amygdalus (Rosaceae) based on DNA sequences and morphology". Plant Systematics and Evolution. 299 (8): 1403–1418. doi:10.1007/s00606-013-0802-1. ISSN 1615-6110. S2CID 14542774.
  3. ^ Su, Na; Hodel, Richard G. J.; Wang, Xi; Wang, Jun-Ru; Xie, Si-Yu; Gui, Chao-Xia; Zhang, Ling; Chang, Zhao-Yang; Zhao, Liang; Potter, Daniel; Wen, Jun (2023-04-06). "Molecular phylogeny and inflorescence evolution of Prunus (Rosaceae) based on RAD-seq and genome skimming analyses". Plant Diversity. doi:10.1016/j.pld.2023.03.013. ISSN 2468-2659. S2CID 258013062.
  4. ^ a b Mason, S.C. (1913-11-10). "The pubescent-fruited species of Prunus of the southwestern states". Journal of Agricultural Research. 1 (2): 147–177.
  5. ^ Prigge, Barry A. (2002). "A new species of Prunus (Rosaceae) from the Mojave Desert of California". Madroño. 49 (4): 285–288. ISSN 0024-9637. JSTOR 41425478.
  6. ^ a b Chin, Siew-Wai; Shaw, Joey; Haberle, Rosemarie; Wen, Jun; Potter, Dan (2014-07-01). "Diversification of almonds, peaches, plums and cherries – Molecular systematics and biogeographic history of Prunus (Rosaceae)". Molecular Phylogenetics and Evolution. 76: 34–48. doi:10.1016/j.ympev.2014.02.024. ISSN 1055-7903. PMID 24631854.
  7. ^ "amygdalus", Online Latin Dictionary; accessed 2022.07.20.
  8. ^ "桃亚属 Subgen. Persica". iPlant 植物智——植物物种信息系统 (in Chinese). 中国科学院植物研究所系统与进化植物学国家重点实验室. Retrieved 2021-02-17.
  9. ^ Yazbek, Mariana (9 April 2010). Systematics of Prunus subgenus Amygdalus: Monograph and Phylogeny. Cornell University (published 2010-04-09). hdl:1813/14843.
  10. ^ Mowrey, B. D.; Werner, D. J. (1990-07-01). "Phylogenetic relationships among species of Prunus as inferred by isozyme markers". Theoretical and Applied Genetics. 80 (1): 129–133. doi:10.1007/BF00224026. ISSN 1432-2242. PMID 24220821. S2CID 25963976.
  11. ^ Wang, Wei; Wang, Hui-Ling; Xiao, Xun-Ze; Xu, Xin-Qiao (2019-12-01). "Characterization of the complete chloroplast genome of longstalk almond (Prunus pedunculata (Pall.) Maxim.), an important sand-fixation shrub plant endemic to northern China". Conservation Genetics Resources. 11 (4): 419–421. doi:10.1007/s12686-018-1039-7. ISSN 1877-7260. S2CID 255785457.
  12. ^ Duan, Chunyan; Shen, Yehua; Zhao, Guifang (2020-01-02). "Complete chloroplast genome characteristics of Prunus triloba Lindl". Mitochondrial DNA Part B. 5 (1): 504–505. doi:10.1080/23802359.2019.1704657. ISSN 2380-2359. PMC 7748640. PMID 33366622.
  13. ^ Wang, Wei; Yang, Tao; Wang, Hui-Ling; Li, Zhen-Jian; Ni, Jian-Wei; Su, Shang; Xu, Xin-Qiao (2020-06-23). "Comparative and phylogenetic analyses of the complete chloroplast genomes of six almond species (Prunus spp. L.)". Scientific Reports. 10 (1): 10137. doi:10.1038/s41598-020-67264-3. ISSN 2045-2322. PMC 7311419. PMID 32576920.
  14. ^ a b Hodel, Richard G. J.; Zimmer, Elizabeth; Wen, Jun (2021-07-01). "A phylogenomic approach resolves the backbone of Prunus (Rosaceae) and identifies signals of hybridization and allopolyploidy". Molecular Phylogenetics and Evolution. 160: 107118. doi:10.1016/j.ympev.2021.107118. ISSN 1055-7903. PMID 33609711. S2CID 231979781.
  15. ^ Coulibaly, Daouda; Huang, Xiao; Ting, Shi; Iqbal, Shahid; Ni, Zhaojun; Ouma, Kenneth Omondi; Hayat, Faisal; Tan, Wei; Hu, Guofeng; Ma, Chengdong; Karikari, Benjamin; Magdy, Mahmoud; Gao, Zhihong (September 2022). "Comparative analysis of complete chloroplast Genome and phenotypic characteristics of Japanese apricot accessions". Horticulturae. 8 (9): 794. doi:10.3390/horticulturae8090794. ISSN 2311-7524.
  16. ^ a b Wan, Tian; Qiao, Bai-xue; Zhou, Jing; Shao, Ke-sen; Pan, Liu-yi; An, Feng; He, Xu-sheng; Liu, Tao; Li, Ping-ke; Cai, Yu-liang (2023). "Evolutionary and phylogenetic analyses of 11 Cerasus species based on the complete chloroplast genome". Frontiers in Plant Science. 14. doi:10.3389/fpls.2023.1070600. ISSN 1664-462X. PMC 10022824. PMID 36938043.
  17. ^ Bortiri, Esteban; Oh, Sang-Hun; Jiang, Jianguo; Baggett, Scott; Granger, Andrew; Weeks, Clay; Buckingham, Megan; Potter, Daniel; Parfitt, Dan E. (2001). "Phylogeny and systematics of Prunus (Rosaceae) as determined by sequence analysis of ITS and the chloroplast trnL-trnF spacer DNA". Systematic Botany. 26 (4): 797–807. ISSN 0363-6445. JSTOR 3093861.

January 01, 1970
prunus, subg, prunus, subgenus, prunus, this, subgenus, includes, plums, apricots, bush, cherries, some, species, conventionally, included, prunus, subg, amygdalus, clustered, with, plum, apricot, species, according, molecular, phylogenetic, studies, 2013, inc. Prunus subg Prunus is a subgenus of Prunus This subgenus includes plums apricots and bush cherries Some species conventionally included in Prunus subg Amygdalus are clustered with plum apricot species according to molecular phylogenetic studies 1 2 Shi et al 2013 has incorporated subg Amygdalus into subg Prunus thereby including almonds and peaches in this subgenus 1 The species in this subgenus have solitary flowers or 2 3 in a fascicle 1 3 Prunus subg Prunus Plums and nectarines Scientific classification Kingdom Plantae Clade Tracheophytes Clade Angiosperms Clade Eudicots Clade Rosids Order Rosales Family Rosaceae Genus Prunus Subgenus Prunus subg Prunus Section See text Contents 1 Sections according to Shi et al 2013 1 1 Sect Emplectocladus 1 2 Sect Amygdalus amp Sect Persica 1 3 Sect Armeniaca 1 4 Sect Microcerasus 1 5 Sect Prunocerasus 1 6 Sect Prunus 2 Additional sections 2 1 Sect Chamaeamygdalus 2 2 Sect Louiseania 2 3 Sect Penarmeniaca 3 Notes 4 ReferencesSections according to Shi et al 2013 editShi et al 2013 divide subg Prunus into seven sections sect Amygdalus sect Armeniaca sect Emplectocladus sect Microcerasus sect Persicae sect Prunocerasus and sect Prunus They form three clades The basal clade is sect Emplectocladus which is sometimes treated as a subgenus The other two clades are the Amygdalus Persicae clade sometimes treated as subg Amygdalus and the Armeniaca Microcerasus Prunocerasus Prunus clade subg Prunus in a narrow sense 1 Sect Emplectocladus edit Prunus sect Emplectocladus Torr A Gray is the sister group to all the other species in this subgenus 1 and sometimes treated as a distinct subgenus Prunus subg Emplectocladus Torr S C Mason It includes six New World species 4 5 Prunus fasciculata desert almond Prunus cercocarpifolia Prunus eremophila Mojave Desert almond Prunus havardii Havard s wild almond Prunus microphylla Mexican wild almond Prunus minutiflora Texas wild almond Sect Amygdalus amp Sect Persica edit Prunus sect Amygdalus L Benth amp Hook f and Prunus sect Persica Mill Nakai a sometimes constitute Prunus subg Amygdalus L Focke They form a monophyletic clade together but the boundary between them seems not very distinct A few species such as P spinosissima thorny almond and P kansuensis Gansu peach are clustered in either sect Amygdalus or sect Persica in different studies 2 6 The word ămygdălus is Latin for the almond nut 7 Sect Amygdalus includes most Old World almond species except P mongolica P tangutica P triloba P pedunculata P tenella P petunnikowii and probably other related species 2 Selected species Prunus arabica Arabian wild almond Prunus dulcis almond Prunus fenzliana Prunus spinosissima thorny almond Sect Persica includes peach species 8 as well as two species previously considered almonds P mongolica and P tangutica 2 Prunus davidiana Chinese peach Prunus ferganensis Fergana peach Prunus kansuensis Gansu peach Prunus mira Tibetan peach Prunus mongolica Mongolian almond Prunus persica peach Prunus tangutica Tangut almond Sect Armeniaca edit Main article apricot Species in this Prunus sect Armeniaca Scop Koch are apricots native to Eurasia 1 Selected species Prunus armeniaca apricot Prunus mandshurica Manchurian apricot Prunus mume Japanese apricot Prunus sibirica Siberian apricot Sect Microcerasus edit Main article Prunus sect Microcerasus Species in Prunus sect Microcerasus Webb amp Berthel C K Schneid are known as bush cherries or dwarf cherries 1 Selected species Prunus glandulosa Prunus japonica Prunus prostrata Prunus pumila Prunus tianshanica Prunus tomentosa Sect Prunocerasus edit Main article Prunus sect Prunocerasus Prunus sect Prunocerasus Koehne includes New World plums and peachbush P texana 2 1 Selected species Prunus americana American plum Prunus angustifolia sand plum Prunus maritima beach plum Prunus mexicana Mexican plum Prunus nigra Canada plum Prunus texana peachbush Sect Prunus edit Main article Prunus sect Prunus Prunus sect Prunus includes Old World plums 1 Selected species Prunus cerasifera cherry plum Prunus domestica European plum Prunus salicina Chinese plum Prunus simonii apricot plum Prunus spinosa sloeAdditional sections editSpecies of the following sections were not presented in the results of Shi et al 2013 Therefore their relationship with the sections proposed by Shi et al 2013 is unclear Sect Chamaeamygdalus edit Prunus sect Chamaeamygdalus Spach Dippel used to be included in the Amygdalus Persica clade However molecular phylogenetic research indicates that it should be excluded from the Amygdalus Persica clade 2 The phylogenetic positions of the species in this section are still uncertain Prunus tenella Russian almond Prunus petunnikowii Sect Louiseania edit Prunus sect Louiseania Carriere Yazbek includes two or three Asian species 9 Although they are called flowering almond they are more related to bush cherries sect Microcerasus and apricots sect Armeniaca 2 6 10 11 12 13 14 15 16 According to nuclear phylogenomic analyses the type species of sect Louiseania P triloba is embedded in sect Microcerasus and closely related to the P prostrata the type species of sect Microcerasus However in the phylogenetic tree based on plastid genome P triloba together with P tomentosa also a member of sect Microcerasus and apricots is in a clade that is sister to the core part of sect Microcerasus 14 16 Prunus pedunculata Prunus triloba Prunus ulmifolia Sect Penarmeniaca edit Prunus sect Penarmeniaca S C Mason is the sister group to New World plums P texana and probably the Old World species P tenella 2 It includes two New World species 4 17 Prunus andersonii desert peach Prunus fremontii desert apricotNotes edit Shi et al 2013 gave this section a new name Prunus sect Persicae T T Yu amp L T Lu S L Zhou References edit a b c d e f g h i Shi Shuo Li Jinlu Sun Jiahui Yu Jing Zhou Shiliang 2013 Phylogeny and classification of Prunus sensu lato Rosaceae Journal of Integrative Plant Biology 55 11 1069 1079 doi 10 1111 jipb 12095 ISSN 1744 7909 PMID 23945216 a b c d e f g h Yazbek M Oh S H 2013 10 01 Peaches and almonds phylogeny of Prunus subg Amygdalus Rosaceae based on DNA sequences and morphology Plant Systematics and Evolution 299 8 1403 1418 doi 10 1007 s00606 013 0802 1 ISSN 1615 6110 S2CID 14542774 Su Na Hodel Richard G J Wang Xi Wang Jun Ru Xie Si Yu Gui Chao Xia Zhang Ling Chang Zhao Yang Zhao Liang Potter Daniel Wen Jun 2023 04 06 Molecular phylogeny and inflorescence evolution of Prunus Rosaceae based on RAD seq and genome skimming analyses Plant Diversity doi 10 1016 j pld 2023 03 013 ISSN 2468 2659 S2CID 258013062 a b Mason S C 1913 11 10 The pubescent fruited species of Prunus of the southwestern states Journal of Agricultural Research 1 2 147 177 Prigge Barry A 2002 A new species of Prunus Rosaceae from the Mojave Desert of California Madrono 49 4 285 288 ISSN 0024 9637 JSTOR 41425478 a b Chin Siew Wai Shaw Joey Haberle Rosemarie Wen Jun Potter Dan 2014 07 01 Diversification of almonds peaches plums and cherries Molecular systematics and biogeographic history of Prunus Rosaceae Molecular Phylogenetics and Evolution 76 34 48 doi 10 1016 j ympev 2014 02 024 ISSN 1055 7903 PMID 24631854 amygdalus Online Latin Dictionary accessed 2022 07 20 桃亚属 Subgen Persica iPlant 植物智 植物物种信息系统 in Chinese 中国科学院植物研究所系统与进化植物学国家重点实验室 Retrieved 2021 02 17 Yazbek Mariana 9 April 2010 Systematics of Prunus subgenus Amygdalus Monograph and Phylogeny Cornell University published 2010 04 09 hdl 1813 14843 Mowrey B D Werner D J 1990 07 01 Phylogenetic relationships among species of Prunus as inferred by isozyme markers Theoretical and Applied Genetics 80 1 129 133 doi 10 1007 BF00224026 ISSN 1432 2242 PMID 24220821 S2CID 25963976 Wang Wei Wang Hui Ling Xiao Xun Ze Xu Xin Qiao 2019 12 01 Characterization of the complete chloroplast genome of longstalk almond Prunus pedunculata Pall Maxim an important sand fixation shrub plant endemic to northern China Conservation Genetics Resources 11 4 419 421 doi 10 1007 s12686 018 1039 7 ISSN 1877 7260 S2CID 255785457 Duan Chunyan Shen Yehua Zhao Guifang 2020 01 02 Complete chloroplast genome characteristics of Prunus triloba Lindl Mitochondrial DNA Part B 5 1 504 505 doi 10 1080 23802359 2019 1704657 ISSN 2380 2359 PMC 7748640 PMID 33366622 Wang Wei Yang Tao Wang Hui Ling Li Zhen Jian Ni Jian Wei Su Shang Xu Xin Qiao 2020 06 23 Comparative and phylogenetic analyses of the complete chloroplast genomes of six almond species Prunus spp L Scientific Reports 10 1 10137 doi 10 1038 s41598 020 67264 3 ISSN 2045 2322 PMC 7311419 PMID 32576920 a b Hodel Richard G J Zimmer Elizabeth Wen Jun 2021 07 01 A phylogenomic approach resolves the backbone of Prunus Rosaceae and identifies signals of hybridization and allopolyploidy Molecular Phylogenetics and Evolution 160 107118 doi 10 1016 j ympev 2021 107118 ISSN 1055 7903 PMID 33609711 S2CID 231979781 Coulibaly Daouda Huang Xiao Ting Shi Iqbal Shahid Ni Zhaojun Ouma Kenneth Omondi Hayat Faisal Tan Wei Hu Guofeng Ma Chengdong Karikari Benjamin Magdy Mahmoud Gao Zhihong September 2022 Comparative analysis of complete chloroplast Genome and phenotypic characteristics of Japanese apricot accessions Horticulturae 8 9 794 doi 10 3390 horticulturae8090794 ISSN 2311 7524 a b Wan Tian Qiao Bai xue Zhou Jing Shao Ke sen Pan Liu yi An Feng He Xu sheng Liu Tao Li Ping ke Cai Yu liang 2023 Evolutionary and phylogenetic analyses of 11 Cerasus species based on the complete chloroplast genome Frontiers in Plant Science 14 doi 10 3389 fpls 2023 1070600 ISSN 1664 462X PMC 10022824 PMID 36938043 Bortiri Esteban Oh Sang Hun Jiang Jianguo Baggett Scott Granger Andrew Weeks Clay Buckingham Megan Potter Daniel Parfitt Dan E 2001 Phylogeny and systematics of Prunus Rosaceae as determined by sequence analysis of ITS and the chloroplast trnL trnF spacer DNA Systematic Botany 26 4 797 807 ISSN 0363 6445 JSTOR 3093861 Retrieved from https en wikipedia org w index php title Prunus subg Prunus amp oldid 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