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List of distinct cell types in the adult human body

April 12, 2024

See also: Cell type

There are about 30 trillion (3×1013) human cells in the adult human body, varying from about 20 to 40 trillion depending on the sex, age and weight, and a roughly equal number of bacterial cells.[1][2][3][4][5][6] The human cells have been categorized into over 400 cell types[2] based on location and function within the body, of which about 230 types are listed here.

A family tree including all the known human cells. However, not all cells are linked to their precursor or progenitor yet.
The main cellular components of the human body by count[4]
Cell type % cell count
Erythrocytes (red blood cells) 84.0
Platelets 4.9
Bone marrow cells 2.5
Vascular endothelial cells 2.1
Lymphocytes 1.5
Hepatocytes 0.8
Neurons and glia 0.6
Bronchial endothelial cells 0.5
Epidermal cells 0.5
Respiratory interstitial cells 0.5
Adipocytes (fat cells) 0.2
Dermal fibroblasts 0.1
Muscle cells 0.001
Other cells 2.0
The above dataset provides a nested list of cell groups with over 400 human cell types with cell count, cell size, and aggregate cell mass (biomass). See Dataset S1, Cell Group by Subgroup Tab, in this reference.[7]

There are many different types of cells in the human body.

Major efforts to map all human cells edit

Several efforts have been made to make a list or a map of all human cells.[8][9][10] One of the largest and most recent is the HuBMAP (Human BioMolecular Atlas Program).[11] They managed to organize 1551 samples across 17 collections. However, this project still only mapped about 31 of the human bodies' 70 organs. Their datasets and visualisations place great emphasis on biomarkers and location in the body, but less on cell development and how cells can change over time. Usually specific surface proteins are used to identify cells, and based on this they are put into different categories. Another major effort to make an overview of these proteins that allows us to observe cell types is the Swedish Protein Atlas.[12]

The Human Brain Project has attempted to map the human brain,[13][14] although much of the publicly accessible model does not have cellular resolution.

Complete lists of human cells known so far edit

Cells derived primarily from endoderm edit

The endodermal cells primarily generate the lining and glands of the digestive tube.[15]

Cells derived primarily from ectoderm edit

Nervous system edit

There are nerve cells, also known as neurons, present in our human body. They are branched out. These cells make up nervous tissue. A neuron consists of a cell body with a nucleus and cytoplasm, from which long thin hair-like parts arise.

Central nervous system neurons and glial cells edit

See also: glial cell

(large variety of types, still poorly classified)

Cells derived primarily from mesoderm edit

Note: Cephalic connective tissue and bones are derived from the cranial neural crest which comes from the ectoderm germ layer

Name Progenitor

(precursor cell)

Predecessor Cells Location in Body Function Cell type Cell subtype Originally derived from Known biomarkers
Brunner's gland cell crypt basal stem cells Zymogen cell, Goblet cell, Entero-endocrine, Enterocyte in duodenum, duodenal submucosa[16] enzyme and alkaline mucus secretion Exocrine secretory epithelial cells Endoderm
Insulated goblet cell Respiratory and digestive tracts mucus secretion
Foveolar cell Stomach
Chief cell pepsinogen secretion
Parietal cell hydrochloric acid secretion
Pancreatic acinar cell Pancreas (confirmation needed) bicarbonate and digestive enzyme secretion
Paneth cell small intestine lysozyme secretion
Type II pneumocyte Lungs surfactant secretion
Club cell
Type I pneumocyte formation of the Blood-Gas Barrier Barrier cell
Gall bladder epithelial cell Gall bladder
Centroacinar cell Pancreas (salivary glands)
Intestinal brush border cell (with microvilli)
K cell gastric inhibitory peptide secretion Hormone-secreting cells Enteroendocrine cell
L cell glucagon-like peptide-1, peptide YY3-36, oxyntomodulin, and glucagon-like peptide-2) secretion
I cell cholecystokinin (CCK) secretion
G cell gastrin secretion
Enterochromaffin cell serotonin secretion
Enterochromaffin-like cell histamine secretion
N cell neurotensin secretion
S cell secretin secretion
D cell somatostatin secretion
Mo cell (or M cell) motilin secretion
other hormones secreted: vasoactive intestinal peptide, substance P, alpha and gamma-endorphin, bombesin
Thyroid epithelial cell Thyroid gland cells
Parafollicular cell
Parathyroid chief cell Parathyroid gland cells
Oxyphil cell
Alpha cell glucagon secretion Pancreatic islets (islets of Langerhans)
Beta cell insulin and amylin secretion
Delta cell somatostatin secretion
Epsilon cell ghrelin secretion
PP cell (gamma cell) pancreatic polypeptide secretion
Salivary gland mucous cell Exocrine secretory epithelial cells Ectoderm
Salivary gland serous cell
Von Ebner's gland cell in tongue (washes taste buds)
Mammary gland cell (milk secretion)
Lacrimal gland cell (tear secretion)
Ceruminous gland cell in ear (earwax secretion)
Eccrine sweat gland dark cell (glycoprotein secretion)
Eccrine sweat gland clear cell (small molecule secretion)
Apocrine sweat gland cell (odoriferous secretion, sex-hormone sensitive)
Gland of Moll cell in eyelid (specialized sweat gland)
Sebaceous gland cell (lipid-rich sebum secretion)
Bowman's gland cell in nose (washes olfactory epithelium)
Corticotropes Hormone-secreting cells Anterior/Intermediate pituitary cells
Gonadotropes Anterior/Intermediate pituitary cells
Lactotropes Anterior/Intermediate pituitary cells
Melanotropes Anterior/Intermediate pituitary cells
Somatotropes Anterior/Intermediate pituitary cells
Thyrotropes Anterior/Intermediate pituitary cells
Magnocellular neurosecretory cells secrete oxytocin and vasopressin
Parvocellular neurosecretory cells secrete thyrotropin-releasing hormone (TRH), corticotropin-releasing hormone (CRH), vasopressin, oxytocin, neurotensin, and prolactin
Chromaffin cells (adrenal gland)
Keratinocyte (differentiating epidermal cell) Epithelial cells
Epidermal basal cell (stem cell)
Melanocyte
Trichocyte (gives rise to hair and nail cells)
Medullary hair shaft cell Trichocyte
Cortical hair shaft cell Trichocyte
Cuticular hair shaft cell Trichocyte
Huxley's layer hair root sheath cell Trichocyte
Henle's layer hair root sheath cell Trichocyte
Outer root sheath hair cell Trichocyte
Surface epithelial cell cornea, tongue, mouth, nasal cavity, distal anal canal, distal urethra, and distal vagina
basal cell (stem cell) cornea, tongue, mouth, nasal cavity, distal anal canal, distal urethra, and distal vagina
Striated duct cell (salivary glands)
Lactiferous duct cell (mammary glands)
Ameloblast (deposit tooth enamel)
Odontoblast (tooth dentin formation) Oral cells
Cementoblast (tooth cementum formation)
Auditory inner hair cells of organ of Corti Sensory transducer cells
Auditory outer hair cells of organ of Corti
Basal cells of olfactory epithelium (stem cell for olfactory neurons)
Cold-sensitive primary sensory neurons
Heat-sensitive primary sensory neurons
Merkel cells of epidermis
Olfactory receptor neurons
Pain-sensitive primary sensory neurons
Photoreceptor rod cells Photoreceptor cells of retina in eye
Photoreceptor blue-sensitive cone cells of eye Photoreceptor cells of retina in eye
Photoreceptor green-sensitive cone cells of eye Photoreceptor cells of retina in eye
Photoreceptor red-sensitive cone cells of eye Photoreceptor cells of retina in eye
Proprioceptive primary sensory neurons
Touch-sensitive primary sensory neurons
Chemoreceptor glomus cells of carotid body cell (blood pH sensor)
Outer hair cells of vestibular system of ear (acceleration and gravity)
Inner hair cells of vestibular system of ear
Taste receptor cells of taste bud
Cholinergic neurons (various types) Autonomic neuron cells
Adrenergic neural cells (various types)
Peptidergic neural cells (various types)
Inner pillar cells of organ of Corti Sense organ and peripheral neuron supporting cells
Outer pillar cells of the organ of Corti
Inner phalangeal cells of organ of Corti
Outer phalangeal cells of organ of Corti
Border cells of organ of Corti
Hensen's cells of organ of Corti
Vestibular apparatus supporting cells
Taste bud supporting cells
Olfactory epithelium supporting cells
Olfactory ensheathing cells
Schwann cells
Satellite glial cells
Enteric glial cells
Basket cells Central nervous system neurons and glial cells Neuron Interneurons
Cartwheel cells Interneurons
Stellate cells Interneurons
Golgi cells Interneurons
Granule cells Interneurons
Lugaro cells Interneurons
Interneurons
Martinotti cells Interneurons
Chandelier cells Interneurons
Cajal–Retzius cells Interneurons
Double-bouquet cells Interneurons
Neurogliaform cells Interneurons
Retina horizontal cells Interneurons
Starburst amacrine cells Interneurons - > Amacrine cells
Renshaw cells Interneurons - >Spinal interneurons
Spindle neurons Principal cells
Fork neurons Principal cells
Place cells Principal cells-> Pyramidal cells
Grid cells Principal cells-> Pyramidal cells
Speed cells Principal cells-> Pyramidal cells
Head direction cells Principal cells-> Pyramidal cells
Betz cells Principal cells-> Pyramidal cells
Boundary cells Principal cells->Stellate cells
Bushy cells Principal cells
Purkinje cells Principal cells
Medium spiny neurons Principal cells
Astrocytes
Oligodendrocytes
Tanycytes Ependymal cells
Pituicytes
Anterior lens epithelial cell Lens cells
Crystallin-containing lens fiber cell
White fat cell Right atrium, atrioventricular junction, left atrium, left ventricle, right ventricle, epicardium Myocardium, atriventricular node Metabolism and storage cells Adipocytes Mesoderm (gene:)FASN, GPAM, LEP,[17]
Brown fat cell
Liver lipocyte
Cells of the Zona glomerulosa produce mineralocorticoids Secretory cells Cells of the adrenal cortex
Cells of the Zona fasciculata produce glucocorticoids
Cells of the zona reticularis produce androgens
Theca Interna cell ovarian follicle secreting estrogen
Corpus luteum cell ruptured ovarian follicle secreting progesterone
Granulosa lutein cells Corpus luteum cell
Theca lutein cells
Leydig cell testes secreting testosterone
Seminal vesicle cell (secretes seminal fluid components, including fructose for swimming sperm)
Prostate gland cell (secretes seminal fluid components)
Bulbourethral gland cell (mucus secretion)
Bartholin's gland cell (vaginal lubricant secretion)
Gland of Littré cell (mucus secretion)
Uterus endometrium cell (carbohydrate secretion)
Juxtaglomerular cell (renin secretion)
Macula densa cell kidney
Peripolar cell
Mesangial cell
Parietal epithelial cell Urinary system Barrier cells
Podocyte
Proximal tubule brush border cell
Loop of Henle thin segment cell
Kidney distal tubule cell
Principal cell Kidney collecting duct cell
Intercalated cell Epithelial / Barrier cells Mesoderm
Transitional epithelium (lining urinary bladder) Barrier cells Mesoderm
Duct cell (of seminal vesicle, prostate gland, etc.) Reproductive system Barrier cells
Efferent ducts cell
Epididymal principal cell
Epididymal basal cell
Endothelial cells Circulatory system, capillary ABCC9, KCNJ8, RGS5
Planum semilunar epithelial cell of vestibular system of ear (proteoglycan secretion) Extracellular matrix cells
Organ of Corti interdental epithelial cell (secreting tectorial membrane covering hair cells)
Loose connective tissue fibroblasts
Corneal fibroblasts (corneal keratocytes)
Tendon fibroblasts
Bone marrow reticular tissue fibroblasts
Other nonepithelial fibroblasts
Hepatic stellate cell (Ito cell) Liver? Pericyte
Nucleus pulposus cell intervertebral disc
Hyaline cartilage chondrocyte
Fibrocartilage chondrocyte
Elastic cartilage chondrocyte
Osteoblast/osteocyte
Osteoprogenitor cell (stem cell of osteoblasts)
Hyalocyte vitreous body of eye
Stellate cell perilymphatic space of the ear
Pancreatic stellate cell
Red skeletal muscle cell (slow twitch) Contractile cells Skeletal muscle cells
White skeletal muscle cell (fast twitch)
Intermediate skeletal muscle cell
Nuclear bag cell muscle spindle
Nuclear chain cell muscle spindle
Myosatellite cell (stem cell)
Cardiac muscle cell Cardiac muscle cells
SA node cell
Purkinje fiber cell
Smooth muscle cell (various types) iris
Myoepithelial cell exocrine glands
Erythrocyte (red blood cell) erythroblasts Blood and immune system cells
Megakaryocyte (platelet precursor)
Platelets if considered distinct cells, currently there's debate on the subject.
Monocyte (white blood cell)
Connective tissue macrophage (various types)
Epidermal Langerhans cell
Osteoclast in bone
Dendritic cell (in lymphoid tissues)
Microglial cell (in central nervous system)
Neutrophil granulocyte precursors (myeloblast, promyelocyte, myelocyte, metamyelocyte)
Eosinophil granulocyte and precursors???
Basophil granulocyte and precursors???
Mast cell
Helper T cell
Regulatory T cell
Cytotoxic T cell
Natural killer T cell
B cell(/lymphocyte) Left atrium, left ventricle, septum, right ventricle, epicaridum Myocardium
Plasma cell
Natural killer cell
Hematopoietic stem cells and committed progenitors for the blood and immune system (various types)
Oogonium/oocyte Germ cells
Spermatid
Spermatocyte
Spermatogonium cell Stem cell for spermatocyte
Spermatozoon
Granulosa cell In the ovaries Nurse cells
Sertoli cell In the testis
Epithelial reticular cell In the thymus
Interstitial kidney cells Kidney Interstitial cells
Amex_153 unknown unknown brain None None unknown None PPP1R1C, FER1L6-AS2, RP11-421N8.3
Amex_154 unknown unknown brain None None unknown None DCSTAMP, PTGER3, RP11-412K20.1, RP11-33A14.1
Amex_155 unknown unknown brain None None unknown None RP11-412K20.1, CTD-2195H9.1, RP11-421N8.3
Amex_156 unknown unknown brain None None unknown None TACR3, MOXD1, RP11-799O21.2, RP11-63G10.4
Amex_157 unknown unknown brain None None unknown None TG, LAMA3, RP11-799O21.2
Amex_158 unknown unknown brain None None unknown None TACR3, WDR86, NPFFR2
Amex_159 unknown unknown brain None None unknown None POSTN, LINC01821, CALCRL
Amex_160 unknown unknown brain None None unknown None PTGER3, PLEKHG4B, NPFFR2, MSC-AS1
Amex_161 unknown unknown brain None None unknown None MEPE, TG, S100Z
Amex_162 unknown unknown brain None None unknown None POSTN, CCBE1, AC067959.1
Amex_171 unknown unknown brain None None unknown None LINC01876, RP11-60A8.1, CTD-2058B24.2
Amex_172 unknown unknown brain None None unknown None CRHR2, LINC02055, RP11-60A8.1, RP11-370B11.4
Amex_173 unknown unknown brain None None unknown None AC092684.1, RP11-60A8.1
Amex_174 unknown unknown brain None None unknown None FER1L6-AS2, RP11-418J17.3, RP11-60A8.1
Amex_175 unknown unknown brain None None unknown None LINC02248, RP11-153I24.5
Amex_405 unknown unknown brain None None unknown None RXFP1, NDST4, PRLR, MEIS2, CDH13
Amex_406 unknown unknown brain None None unknown None RXFP2, CARTPT, IRAG2
Amex_407 unknown unknown brain None None unknown None PAPPA2, LHX9
Amex_408 unknown unknown brain None None unknown None EOMES, HPSE2, RELN
Amex_419 unknown unknown brain None None unknown None SCN5A, CARM1P1, PTH2R, NR2F2-AS1, CTC-552D5.1
Astro L1 FGFR3 SERPINI2 unknown unknown brain None None unknown None CFAP47, WDR49
Astro L1-6 FGFR3 AQP1 unknown unknown brain None None unknown None TNC
Astro L1-6 FGFR3 PLCG1 unknown unknown brain None None unknown None COL5A3, LOC105376917
Astro_52 unknown unknown brain None None unknown None LINC01727, COL5A3
Astro_53 unknown unknown brain None None unknown None GLI3, COL5A3
Astro_54 unknown unknown brain None None unknown None F11-AS1, ETNPPL, GLI3, OBI1-AS1
Astro_55 unknown unknown brain None None unknown None FGFR3, HPSE2, WIF1
Astro_56 unknown unknown brain None None unknown None TNC, OBI1-AS1, GPC5
Astro_57 unknown unknown brain None None unknown None TNC, FGFR3, OBI1-AS1, LINC00609, RP11-134O15.3
Astro_58 unknown unknown brain None None unknown None ID3, LINC00499, FGFR3
Astro_59 unknown unknown brain None None unknown None LGR6, ITPRID1, OBI1-AS1, HPSE2
Astro_60 unknown unknown brain None None unknown None TNC, LINC00499, EDNRB, APOE
Astro_61 unknown unknown brain None None unknown None AQP1, GFAP, RP11-259K15.2
Astro_62 unknown unknown brain None None unknown None TNC, LINC00836, APOE
Astro_63 unknown unknown brain None None unknown None GFAP, CRYAB
Astro_64 unknown unknown brain None None unknown None RP11-297I23.1, RP11-517I3.1
Astrocyte unknown unknown spinal cord None None unknown None SLC14A1
B Cell unknown unknown lymph node None None unknown None CD19, MS4A1, HLA-DRA
B Cell Zone Reticular Cell unknown unknown lymph node None None unknown None CXCL12, TNFSF11
B cell unknown unknown large intestine None None unknown None CD21, CD19, CD20, CD79a
B cell unknown unknown large intestine None None unknown None CD19, CD79a
B cell unknown unknown large intestine None None unknown None CD11b, CD294
B cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, MS4A1, BANK1, CD79A, CD22, BANK1, CD19
B cell unknown unknown Small Intestine None None unknown None MKI67, MS4A1, PAX5
B cell unknown unknown Uterus None None unknown None CD69, CCL5, MS4A1, CXCR4
BCHE (butyrylcholinesterase) cell unknown unknown Small Intestine None None unknown None BEST4, CFTR, guanylin, uroguanylin
Bcell_0 unknown unknown brain None None unknown None MS4A1
Bgl_51 unknown unknown brain None None unknown None LINC01727, LAMA2
Blood Vessel Endothelial Cell unknown unknown lymph node None None unknown None CAV1, CCL14, CD34, CD74, CD209, CD300LG, DARC, EMCN, ESAM, ICAM1, JAM2, HLA-DRA, HLA-DRB1, HLA-DPA1, HLA-DPB1, MARCO, PLVAP, PVRL2, SPARCL1
CA13_119 unknown unknown brain None None unknown None CTXND1, RP11-153I24.5
CA13_163 unknown unknown brain None None unknown None POSTN, AC004862.6
CA13_169 unknown unknown brain None None unknown None ITGA4, RP11-191L9.4
CA13_179 unknown unknown brain None None unknown None COL5A2, COL24A1, AC004538.3
CA13_180 unknown unknown brain None None unknown None BHLHE22, RP11-142C4.6, AC004538.3
CA13_181 unknown unknown brain None None unknown None SLC30A8, COL5A2, AC004538.3
CA13_182 unknown unknown brain None None unknown None FNDC1, CTXND1, COL5A2, RP11-167H9.4, RP11-60A8.1, AC004538.3
CA13_183 unknown unknown brain None None unknown None ABCA13, CASC6, RP11-60A8.1, AC004538.3
CA13_184 unknown unknown brain None None unknown None LINC02153, RP11-60A8.1, AC004538.3
CA13_185 unknown unknown brain None None unknown None NTS, LINC02153, RP11-60A8.1
CA13_186 unknown unknown brain None None unknown None NTS, RP11-369E15.3
CA13_187 unknown unknown brain None None unknown None GABRQ, ITGA4, AC004538.3
CA13_188 unknown unknown brain None None unknown None CTXND1, LINC02055, COL24A1, CCBE1
CA13_189 unknown unknown brain None None unknown None CCN1, CTXND1, ATP10A
CA4_190 unknown unknown brain None None unknown None HGF, FREM2
CA4_191 unknown unknown brain None None unknown None NTS, ST18
CA4_192 unknown unknown brain None None unknown None CASR, ITGA4, ATP10A
CA4_193 unknown unknown brain None None unknown None SCGN, SLC47A1, XACT, HHIP
CA4_194 unknown unknown brain None None unknown None HOPX, RPL26, C9orf16
CA4_195 unknown unknown brain None None unknown None ITGA4, NPNT, COL5A2, HHIP
CA4_196 unknown unknown brain None None unknown None LINC02196, ITGA4
CA4_197 unknown unknown brain None None unknown None LINC02196, RP11-719N9.1
CA4_198 unknown unknown brain None None unknown None CTXND1, COL5A2, EYS
CAP1 general capillary gCap unknown unknown respiratory system None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR, DTL, IL7R, APLNR, PLVAP, GPIHBP1
CAP2 aerocyte capillary aCap unknown unknown respiratory system None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR, EDNRB, APLN, CA4
CBI_298 unknown unknown brain None None unknown None SLC6A5, VCAN, RELN
CBI_299 unknown unknown brain None None unknown None SLC6A5, IGF2BP2, FNDC1
CBI_300 unknown unknown brain None None unknown None SLC4A11, NDNF
CBI_301 unknown unknown brain None None unknown None SLC6A5, SCIN, RREB1
CBI_302 unknown unknown brain None None unknown None CPLX4, RP11-265I24.1
CBI_303 unknown unknown brain None None unknown None LYPD6, RP11-265I24.1
CBI_304 unknown unknown brain None None unknown None SCGN, RP11-274H24.2
CBI_305 unknown unknown brain None None unknown None TFAP2B, NTN1, LINC02552, BMPR1B
CBI_306 unknown unknown brain None None unknown None SCGN, MARCHF11, PTPRK
CBI_307 unknown unknown brain None None unknown None SCGN, LINC02552, VCAN, NXPH1
CD14 monocyte unknown unknown Blood None None unknown None VCAN, CST3, CD14, S100A8, S100A9, FCN1
CD14 monocyte unknown unknown Bone marrow None None unknown None VCAN, CST3, CD14, S100A8, S100A9, FCN1
CD16 monocyte unknown unknown Blood None None unknown None HES4, MS4A7, IFITM3, FCGR3A, CXCL16, LST1
CD16 monocyte unknown unknown Bone marrow None None unknown None HES4, MS4A7, IFITM3, FCGR3A, CXCL16, LST1
CD4 T cell effector memory CD45RA unknown unknown Blood None None unknown None CD3D, TRAC, IL4R, STAT1, MAL, SOCS1, IL2, ODC1, PSAT1, WARS, PYCR1, TNF, NME1
CD4 T cell effector memory CD45RA unknown unknown Bone marrow None None unknown None CD3D, TRAC, IL4R, STAT1, MAL, SOCS1, IL2, ODC1, PSAT1, WARS, PYCR1, TNF, NME1
CD4 T cell memory unknown unknown Blood None None unknown None CD3D, TRAC, IFI6, LGALS3, PDZD8, ANXA2, CRIP1
CD4 T cell memory unknown unknown Blood None None unknown None CD3D, TRAC, IL4R, STAT1, MAL, SOCS1, IL2, ODC1, PSAT1, WARS, PYCR1, TNF, NME1
CD4 T cell memory unknown unknown Blood None None unknown None PDZD8, CXCR6, PRF1, CRIP1, ITGA1, GZMB
CD4 T cell memory unknown unknown Bone marrow None None unknown None CD3D, TRAC, IFI6, LGALS3, PDZD8, ANXA2, CRIP1
CD4 T cell memory unknown unknown Bone marrow None None unknown None CD3D, TRAC, IL4R, STAT1, MAL, SOCS1, IL2, ODC1, PSAT1, WARS, PYCR1, TNF, NME1
CD4 naive unknown unknown Blood None None unknown None CD3D, TRAC, TRBC1, IL7R, TRAT1, LTB, AQP3, CD40LG
CD4 naive unknown unknown Bone marrow None None unknown None CD3D, TRAC, TRBC1, IL7R, TRAT1, LTB, AQP3, CD40LG
CD4+ T unknown unknown Small Intestine None None unknown None CD3D, CD2, CD4
CD4+ T cell unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD3-TCR, CD4
CD4+ T cell unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD4
CD4+ T cell resident memory unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, CD3E, IL7R, CD69, CD44, CD4
CD4+ T memory T cell unknown unknown thoracic thymus None None unknown None ANXA1, AP3M2, CCR7, CD69, GPR183, IL7R, KLF2, LTB, RGCC, RPL36A
CD4+ T single positive thymocyte unknown unknown thoracic thymus None None unknown None ABLIM1, ADD3, C1orf228, CAMK4, DENND2D, GIMAP7, ID2, RPL17, SELL
CD4+ T single positive thymocyte unknown unknown thoracic thymus None None unknown None ABLIM1, ADD3, SELL, CAMK4, DENND2D, GIMAP7, ID2, RPL17
CD56 bright Natural Killer unknown unknown Bone marrow None None unknown None TRDC, KLRB1, CLIC3, CST7, XCL1, GZMK
CD56 bright Natural killer unknown unknown Blood None None unknown None TRDC, KLRB1, CLIC3, CST7, XCL1, GZMK
CD8 T cell effector memory unknown unknown Blood None None unknown None CD3D, TRAC, CCL3, CCL4, HOPX, GZMB
CD8 T cell effector memory unknown unknown Bone marrow None None unknown None CD3D, TRAC, CCL3, CCL4, HOPX, GZMB
CD8 T cell effector memory CD45RA unknown unknown Blood None None unknown None CD3D, TRAC, PRF1, HOPX, NKG7, GNLY, IFIT3, KLRD1, CCL5
CD8 T cell effector memory CD45RA unknown unknown Bone marrow None None unknown None CD3D, TRAC, PRF1, HOPX, NKG7, GNLY, IFIT3, KLRD1, CCL5
CD8 T cell memory unknown unknown Bone marrow None None unknown None PDZD8, CXCR6, PRF1, CRIP1, ITGA1, GZMB
CD8 naive unknown unknown Blood None None unknown None CD3D, TRAC, AQP3, IL7R
CD8 naive unknown unknown Bone marrow None None unknown None CD3D, TRAC, AQP3, IL7R
CD8+ T unknown unknown Small Intestine None None unknown None MGLL, TAGLN, CD3D, CD8A, CD2
CD8+ T cell unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD3-TCR, CD8
CD8+ T cell resident memory unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, CD3E, IL7R, CD69, CD8A, NOTCH1, ITGA1, ITGAE
CD8+ T memory unknown unknown thoracic thymus None None unknown None CCL4, CCL5, CD8A, CD8B, CRTAM, CST7, GZMK, LYAR, NKG7, RGCC
CD8+ T single positive thymocyte unknown unknown thoracic thymus None None unknown None ACTN1, CD7, CD8A, CD8B, CHI3L2, GZMM, IL7R, LRRN3, STK17A
CD8aa(I) thymocyte unknown unknown thoracic thymus None None unknown None CD2, CD8A, CD27, CD28, LCP2, LEF1, NUCB2, PRKCH, PTPN7, TRAC
CD8aa(II) thymocyte unknown unknown thoracic thymus None None unknown None ACTN1, CD7, CTSW, HCST, IKZF2, MME, SMC4, SMIM24, TRGC2, ZNF683
CGE_276 unknown unknown brain None None unknown None VIP, SVEP1
CGE_277 unknown unknown brain None None unknown None SCGN, DDR2
CGE_278 unknown unknown brain None None unknown None DDR2, WIF1, CHRNA7
CGE_279 unknown unknown brain None None unknown None FREM2, CXCL14, DOCK8
CGE_280 unknown unknown brain None None unknown None LAMA3, CTD-2008L17.2
CGE_281 unknown unknown brain None None unknown None HTR3A, EDNRA
CGE_282 unknown unknown brain None None unknown None ADAM33, CTC-367F4.1
CGE_283 unknown unknown brain None None unknown None CXCL14, SGO1-AS1, SYT10, SEMA3C
CGE_284 unknown unknown brain None None unknown None PCDH18, CCN2, CXCL14, RP1-35C21.2
CGE_285 unknown unknown brain None None unknown None VIP, PENK
CGE_286 unknown unknown brain None None unknown None NMBR, NDNF, CXCL14
CGE_287 unknown unknown brain None None unknown None MYH11, ADAMTS20, EYA4
CGE_288 unknown unknown brain None None unknown None CXCL14, CRH, ROR2, CA2
CGE_289 unknown unknown brain None None unknown None TAC3, AJ006995.3, AC133680.1
CGE_290 unknown unknown brain None None unknown None FLT1, VIP, CHRM2
CGE_291 unknown unknown brain None None unknown None NPR3, EDNRA, RP1-35C21.2
CGE_292 unknown unknown brain None None unknown None NPR3, PPP1R1C, CRH, RP11-197H3.1
CGE_293 unknown unknown brain None None unknown None HS3ST3A1, IQGAP2, RP11-197H3.1
CGE_294 unknown unknown brain None None unknown None ABI3BP, VIP
CGE_295 unknown unknown brain None None unknown None VIP, CRH, RXRG, RP11-197H3.1
CGE_296 unknown unknown brain None None unknown None TAC3, CXCL14, CMTM8, LYPD6
COP_37 unknown unknown brain None None unknown None GPR17, BCAS1, PRRX1
COP_38 unknown unknown brain None None unknown None BCAS1, RP11-89N17.4
COP_39 unknown unknown brain None None unknown None TF, CTD-2545M3.8
COP_41 unknown unknown brain None None unknown None OPALIN, AC084149.2
COP_42 unknown unknown brain None None unknown None LINC01608, CNDP1, NTNG1
COP_43 unknown unknown brain None None unknown None SLC5A11, MOBP
COP_75 unknown unknown brain None None unknown None FOLR1, C1QTNF5
Centroblast unknown unknown lymph node None None unknown None AICDA, BCL6, CD19, CD27, CXCR4, Mki67, MS4A1
Centrocyte unknown unknown lymph node None None unknown None BCL6, CD19, CD83, Mki67, MS4A1
Chrp_76 unknown unknown brain None None unknown None PLP1, OTX2-AS1, ST18, RP11-690J15.1
Chrp_77 unknown unknown brain None None unknown None FOLR1, SERPINF1, RP11-690J15.1
Chrp_78 unknown unknown brain None None unknown None POU2AF1, CRYBG1, RP11-729M20.1
Chrp_79 unknown unknown brain None None unknown None POU2AF1, TRPV4, ABCA4
Chrp_80 unknown unknown brain None None unknown None HS3ST3A1, RP11-690J15.1
Chrp_81 unknown unknown brain None None unknown None HPD, C1QTNF5
Chrp_82 unknown unknown brain None None unknown None GPNMB, TTR
Conventional Dendritic Cell cDC1 unknown unknown lymph node None None unknown None XCR1, CADM1, CLEC9A, BATF3, IDO1
Conventional Dendritic Cell cDC2 unknown unknown lymph node None None unknown None CD1C, CLEC10A, CD86
Cycling B unknown unknown palatine tonsil None None unknown None E2F8, CDCA2, NUGGC, CLSPN, ANLN, MYBL1, FAM111B, KIF4A, NUF2, GTSE1
DG_199 unknown unknown brain None None unknown None POSTN, bP-21201H5.1
DG_200 unknown unknown brain None None unknown None CHRNA1, SCART1, RP11-217C7.1
DG_201 unknown unknown brain None None unknown None SLC47A1, RP11-217C7.1, RP11-719N9.1
DG_202 unknown unknown brain None None unknown None TTR, ADRA1A, RP11-719N9.1
DG_203 unknown unknown brain None None unknown None LINC02248, ST18, RP11-484N11.1
DG_204 unknown unknown brain None None unknown None LINC00499, TTR, CASC6, RP11-287J11.1
DG_205 unknown unknown brain None None unknown None CTD-2215L10.1, RP11-217C7.1, RP11-287J11.1
DLCT6b_100 unknown unknown brain None None unknown None SULF1, LINC02232, RXFP1, SEMA5A
DLCT6b_101 unknown unknown brain None None unknown None NFIA-AS2, RP11-120L14.1, RP11-467L24.1
DLCT6b_102 unknown unknown brain None None unknown None LINC01821, ADAMTSL1, RP11-467L24.1, AC064875.2
DLCT6b_103 unknown unknown brain None None unknown None CCN2, PLA2G4A, RP11-467L24.1
DLCT6b_104 unknown unknown brain None None unknown None TRIM22, RP11-467L24.1
DLCT6b_105 unknown unknown brain None None unknown None LINC01680, CCN2, RP4-736H5.3
DLCT6b_106 unknown unknown brain None None unknown None EDNRA, RP11-81D17.1, CTD-2050E21.1
DLCT6b_107 unknown unknown brain None None unknown None ITGA11, SYT6
DLCT6b_108 unknown unknown brain None None unknown None LINC01821, ADAMTSL1, SEMA3E, CTB-57H20.1, RP11-369E15.3
DLCT6b_109 unknown unknown brain None None unknown None LINC02153, LINC02263, LINC01821, RP11-369E15.3, AC114765.1
DLCT6b_110 unknown unknown brain None None unknown None CAV1, TRIM22, SULF1, RP11-640F22.1
DLCT6b_111 unknown unknown brain None None unknown None TMEM233, GABRQ, FBXL21P, SULF1
DLCT6b_112 unknown unknown brain None None unknown None SULF1, MSC-AS1, RP11-467L24.1
DLCT6b_84 unknown unknown brain None None unknown None SLC9C1, POSTN, NPSR1-AS1
DLCT6b_97 unknown unknown brain None None unknown None GUCA1C, RP11-238K6.2
DLCT6b_98 unknown unknown brain None None unknown None CDH24, IL15, ERG
DLCT6b_99 unknown unknown brain None None unknown None DPP4, RP11-467L24.1, FAM160A1
DLIT_136 unknown unknown brain None None unknown None RP11-404H1.1, RP11-114G22.1
DLIT_137 unknown unknown brain None None unknown None LINC02196, AC005150.1, CTD-2195H9.1
DLIT_139 unknown unknown brain None None unknown None RP11-79E3.2, AC005150.1
DLIT_140 unknown unknown brain None None unknown None LINC02263, RP11-79E3.2, RP11-320L2.1, CTB-57H20.1
DLIT_141 unknown unknown brain None None unknown None RORB, NPNT, RP11-511B7.2, RP11-320L2.1
DLIT_142 unknown unknown brain None None unknown None THEMIS, CTD-2195H9.1, CTC-535M15.2
DLIT_143 unknown unknown brain None None unknown None LINC01821, CMTM8, AC005150.1
DLIT_144 unknown unknown brain None None unknown None LINC02263, AC005150.1, RP11-320L2.1, RP11-537P24.1
DLIT_145 unknown unknown brain None None unknown None ALKAL2, LINC02237, AJ006998.2
DLIT_146 unknown unknown brain None None unknown None FBXL21P, ADAMTS16, CBLN2, SNTG2
DLIT_147 unknown unknown brain None None unknown None CCN4, RP4-809F18.1
DLIT_148 unknown unknown brain None None unknown None MCUB, POU6F2, ADAMTS3
DLIT_149 unknown unknown brain None None unknown None LINC00343, THEMIS, TESPA1, CTD-2050E21.2, RP11-191L9.4
DLIT_150 unknown unknown brain None None unknown None THEMIS, POSTN, HPSE2
DLIT_151 unknown unknown brain None None unknown None ATP10A, RP11-81F8.1
DLIT_152 unknown unknown brain None None unknown None PLA2G4A, STK32B
DLNP_83 unknown unknown brain None None unknown None RP11-34C15.2
DLNP_85 unknown unknown brain None None unknown None TACR3, SGO1-AS1, FER1L6-AS2
DLNP_86 unknown unknown brain None None unknown None IFNG-AS1, PLPP3, ADRA1A, PTPRT
DLNP_87 unknown unknown brain None None unknown None SLC9C1, NPSR1, COL9A1, RP11-421N8.3
DLNP_88 unknown unknown brain None None unknown None IFNG-AS1, NPSR1, CD36, RP11-421N8.3
DLNP_89 unknown unknown brain None None unknown None NPSR1-AS1, AE000661.37, RP11-66G15.1
DLNP_90 unknown unknown brain None None unknown None IFNG-AS1, AE000661.37, CTB-57H20.1
DLNP_91 unknown unknown brain None None unknown None CD200R1L, TRIM22, CTC-535M15.2, CTC-340A15.2
DLNP_92 unknown unknown brain None None unknown None FSHR, RP11-286O1.1, CTB-57H20.1
DLNP_93 unknown unknown brain None None unknown None IFNG-AS1, ROR1, NXPH2, CTB-57H20.1
DLNP_94 unknown unknown brain None None unknown None CD200R1L, ROBO3, RP11-511B7.2, RP11-421N8.3
DLNP_95 unknown unknown brain None None unknown None MYOCD, FSHR, NPSR1-AS1, RP11-354I13.2
DLNP_96 unknown unknown brain None None unknown None HMGA2, LINC02008
Dendritic Cell unknown unknown lymph node None None unknown None ITGAX, CD40, CD83, HLA-DRA
Dendritic Cell unknown unknown lymph node None None unknown None CD40, CD83, HLA-DRA
Dorsal Excitatory Neuron 1 unknown unknown spinal cord None None unknown None MAFA, MYO10, COL6A2
Dorsal Excitatory Neuron 10 unknown unknown spinal cord None None unknown None SOX5, TAC1, LMO3
Dorsal Excitatory Neuron 11 unknown unknown spinal cord None None unknown None SOX5, NMU, ISM1
Dorsal Excitatory Neuron 12 unknown unknown spinal cord None None unknown None SOX5, NMU, CALCB
Dorsal Excitatory Neuron 2 unknown unknown spinal cord None None unknown None MAFA, CBLN1, NR2F1
Dorsal Excitatory Neuron 3 unknown unknown spinal cord None None unknown None GABRB2, NR2F1, NTS
Dorsal Excitatory Neuron 4 unknown unknown spinal cord None None unknown None MAFA, GABRB2, MAF
Dorsal Excitatory Neuron 5 unknown unknown spinal cord None None unknown None RELN, PDE11A, IQGAP2
Dorsal Excitatory Neuron 6 unknown unknown spinal cord None None unknown None RELN, PDE11A, NMUR2
Dorsal Excitatory Neuron 7 unknown unknown spinal cord None None unknown None TAC1, PDE11A, NMUR2
Dorsal Excitatory Neuron 8 unknown unknown spinal cord None None unknown None SOX5, TAC1, IGF1
Dorsal Excitatory Neuron 9 unknown unknown spinal cord None None unknown None SOX5, TAC1, CARTPT
Dorsal Inhibitory Neuron 1 unknown unknown spinal cord None None unknown None NR2F2, CAPN8, LINC01197
Dorsal Inhibitory Neuron 2 unknown unknown spinal cord None None unknown None PENK, CAPN8, STK32B
Dorsal Inhibitory Neuron 3 unknown unknown spinal cord None None unknown None RORB, P2RY1, CBLN4
Dorsal Inhibitory Neuron 4 unknown unknown spinal cord None None unknown None ADARB2, CDHR3, NFATC1
Dorsal Inhibitory Neuron 5 unknown unknown spinal cord None None unknown None ADARB2, CDHR3, CDH7
Dorsal Inhibitory Neuron 6 unknown unknown spinal cord None None unknown None PDYN, RORB, SULF1
Dorsal Inhibitory Neuron 7 unknown unknown spinal cord None None unknown None PDYN, LEF1, CCK
Dorsal Inhibitory Neuron 8 unknown unknown spinal cord None None unknown None PDYN, RORB, PROX1
Dorsal Inhibitory Neuron 9 unknown unknown spinal cord None None unknown None NPY, SAMD3, HMCN1
EMSN_222 unknown unknown brain None None unknown None PENK, GFRA1, TAC1
EMSN_223 unknown unknown brain None None unknown None CALCRL, GFRA1, TAC1
EMSN_224 unknown unknown brain None None unknown None TACR1, RXFP1, ALK, FOXP2
EMSN_225 unknown unknown brain None None unknown None CASZ1, LINC02137, LAMA3
EMSN_226 unknown unknown brain None None unknown None CXCL14, PTPRQ, EYA2, RXFP1
EMSN_227 unknown unknown brain None None unknown None NPFFR2, XACT, ONECUT2, FAM160A1
EMSN_228 unknown unknown brain None None unknown None NPFFR2, MEIS1, SEMA3C, ADAMTSL1, RP11-154H17.1
EMSN_229 unknown unknown brain None None unknown None CACNG5, PTH2R, MEIS1, TSHZ1, ADAMTSL1
EMSN_230 unknown unknown brain None None unknown None EYA2, RXFP1, HRH3, ADAMTS3
EMSN_231 unknown unknown brain None None unknown None NPFFR2, LMNTD1, RXFP1, PCDH11Y, TLL1, VWC2L
EMSN_232 unknown unknown brain None None unknown None CHRM5, ABCA1, RXFP1
EMSN_233 unknown unknown brain None None unknown None ZNF736P9Y, CADPS2, PCDH11X, AC133680.1
EMSN_234 unknown unknown brain None None unknown None PAX6, NPFFR2, PRLR
EMSN_426 unknown unknown brain None None unknown None MEIS1, TSHZ1, RP11-537P24.1
Effector Chondrocyte unknown unknown knee None None unknown None STC2, CHAD, IGFBP7
Endo L2-5 NOSTRIN SRGN unknown unknown brain None None unknown None CLDN5
Endothelial Cell unknown unknown spinal cord None None unknown None CLDN5
Endothelial Cell of Lymphatic Vessel unknown unknown lymph node None None unknown None ACKR4, CAV1, NUDT4, NT5E
Eomes low Liver NK cell unknown unknown liver None None unknown None TBX21, eomes
Epen_65 unknown unknown brain None None unknown None DTHD1, TNC, FGFR3
Epen_66 unknown unknown brain None None unknown None NTS, AC018717.1
Epen_67 unknown unknown brain None None unknown None ADGRD2, DTHD1, OBI1-AS1
Epen_68 unknown unknown brain None None unknown None CRIP1, CAPS, OR2B4P
Epen_69 unknown unknown brain None None unknown None CAPS, AC018717.1, RP11-624A4.2
Epen_70 unknown unknown brain None None unknown None TRDN, GRAMD2A, OR2B4P
Epen_71 unknown unknown brain None None unknown None SGMS2, DTHD1
Epen_72 unknown unknown brain None None unknown None OR2B4P, MGC4859, RP11-624A4.2
Epen_73 unknown unknown brain None None unknown None RP11-624A4.2, AC018717.1, AC007682.1
Epen_74 unknown unknown brain None None unknown None DTHD1, TTR
Ependymal Cell unknown unknown spinal cord None None unknown None CFAP73
Exc L2 LAMP5 KCNG3 unknown unknown brain None None unknown None FAM163A, LOC101927668, SAMD3
Exc L2 LINC00507 ATP7B unknown unknown brain None None unknown None ACVR1C, LOC105377209
Exc L2 LINC00507 GLRA3 unknown unknown brain None None unknown None LINC01378, LOC101928278, SERPINE2
Exc L2-3 LINC00507 DSG3 unknown unknown brain None None unknown None BDNF, BMPR1B, LOC105379003
Exc L2-3 RORB CCDC68 unknown unknown brain None None unknown None COBLL1, COL5A2, PRSS12
Exc L2-3 RORB PTPN3 unknown unknown brain None None unknown None COL5A2, LOC105370610, LOC105378334, RORB
Exc L2-3 RORB RTKN2 unknown unknown brain None None unknown None LOC101927745, LOC105376987, PLCH1, RMST
Exc L3 LAMP5 CARM1P1 unknown unknown brain None None unknown None EPB41L4A, SV2C, SYT2
Exc L3 RORB OTOGL unknown unknown brain None None unknown None COL22A1, RMST
Exc L3 THEMIS ENPEP unknown unknown brain None None unknown None FAP, LAMA2, LOC101928964, LOC105376081
Exc L3-5 FEZF2 ASGR2 unknown unknown brain None None unknown None LOC105376457, OR51E2
Exc L3-5 FEZF2 LINC01107 unknown unknown brain None None unknown None BTNL9, EDNRB
Exc L3-5 RORB LAMA4 unknown unknown brain None None unknown None KCNH8, LOC100128497, LOC101927281, LOC105376081, TRP
Exc L3-5 RORB LINC01202 unknown unknown brain None None unknown None LOC101927874, LOC105374971, LOC105376081, LOC105377703
Exc L3-5 RORB LNX2 unknown unknown brain None None unknown None LOC105374971, LOC105377703, TRABD2A
Exc L3-5 RORB RPRM unknown unknown brain None None unknown None LOC105374971, LOC105374973, RPRM
Exc L3-5 RORB TNNT2 unknown unknown brain None None unknown None FSHR, LOC100507562, LOC105376081
Exc L5 FEZF2 CSN1S1 unknown unknown brain None None unknown None LOC105373592, OPN4, VAT1L
Exc L5 FEZF2 NREP-AS1 unknown unknown brain None None unknown None ADAMTS12, CD36, LOC105370315
Exc L5 FEZF2 PKD2L1 unknown unknown brain None None unknown None NPSR1-AS1, VGLL3
Exc L5 FEZF2 RNF144A-AS1 unknown unknown brain None None unknown None CD36, LOC105369818, LOC105370019
Exc L5 RORB MED8 unknown unknown brain None None unknown None COL22A1, LOC401134, NPFFR2
Exc L5 THEMIS FGF10 unknown unknown brain None None unknown None BDNF, CRH, NPFFR2
Exc L5 THEMIS LINC01116 unknown unknown brain None None unknown None LOC105369890, LOC105371663
Exc L5 THEMIS RGPD6 unknown unknown brain None None unknown None DDR2, LOC105371663, THEMIS
Exc L5 THEMIS SLC22A18 unknown unknown brain None None unknown None BTNL9, CCBE1, LOC401134, SLC7A11
Exc L5 THEMIS VILL unknown unknown brain None None unknown None DACH1, LOC101927389, TNC
Exc L5-6 FEZF2 C9orf135-AS1 unknown unknown brain None None unknown None EGFEM1P, FOXP2, SEMA5A
Exc L5-6 FEZF2 CFTR unknown unknown brain None None unknown None LOC105374392, NR4A2, SEMA3D
Exc L5-6 FEZF2 FILIP1L unknown unknown brain None None unknown None LOC100128497, MCTP2, SEC16B, SULF1
Exc L5-6 FEZF2 IFNG-AS1 unknown unknown brain None None unknown None LOC105369818, NPSR1-AS1
Exc L5-6 FEZF2 LPO unknown unknown brain None None unknown None LOC101928114, LOC105376372
Exc L5-6 FEZF2 OR1L8 unknown unknown brain None None unknown None LGR6, LOC101927439, LOC105374392, LOC105377183
Exc L5-6 FEZF2 SH2D1B unknown unknown brain None None unknown None ADAMTSL1, MEIS2, NLGN4Y, PAPSS2
Exc L5-6 THEMIS SMYD1 (L6 IT Car3) unknown unknown brain None None unknown None ATP10A, TRPC5
Exc L5-6 THEMIS TNFAIP6 unknown unknown brain None None unknown None LOC105373893, LOC105378031, LTBP1, TSHZ2
Exc L6 FEZF2 FFAR4 unknown unknown brain None None unknown None FER1L6-AS2, LOC105378486
Exc L6 FEZF2 KLK7 unknown unknown brain None None unknown None LOC101927439, MDFIC
Exc L6 FEZF2 PDYN unknown unknown brain None None unknown None GBP2, PDYN
Exc L6 FEZF2 POGK unknown unknown brain None None unknown None ADD3-AS1, LOC100132891, PCOLCE2
Exc L6 FEZF2 PROKR2 unknown unknown brain None None unknown None LOC105371310, SLITRK6
Exc L6 THEMIS LINC00343 unknown unknown brain None None unknown None ANKRD30B, LINC00299, LINC00343
Exc L6 THEMIS SLN unknown unknown brain None None unknown None FAM163A, LOC105371832, LOC105374524
Exc L6 THEMIS SNTG2 unknown unknown brain None None unknown None LOC101927389, LOC105371310
Fbl_24 unknown unknown brain None None unknown None C7, BMP5
Fbl_25 unknown unknown brain None None unknown None LTBP2, TBX18
Fbl_26 unknown unknown brain None None unknown None SLC6A20, COL15A1
Fbl_27 unknown unknown brain None None unknown None FMO2, LINC02147, ABCA8
Fbl_28 unknown unknown brain None None unknown None C7, FBLN2, COL1A2
Fbl_29 unknown unknown brain None None unknown None SLC2A1, EBF2, BMPR1B
Fbl_30 unknown unknown brain None None unknown None SLC5A5, RP11-354K4.2
Fbl_31 unknown unknown brain None None unknown None PTGDR, BNC2
Fibrocartilage Chondrocyte 1 unknown unknown knee None None unknown None MSMP, COL3A1, COL1A2
Fibrocartilage Chondrocyte 2 unknown unknown knee None None unknown None IGFBP5, PRG4, CTHRC1
Follicular Dendritic Cell unknown unknown lymph node None None unknown None CR2, CXCL13, FCGRB, MADCAM1, MFGE8, VCAM1
Follicular Dendritic Cell unknown unknown lymph node None None unknown None CR2, CXCL13, FCER2A, FCGRB, MADCAM1, MFGE8, VCAM1
Gamma/Delta T cells unknown unknown lymph node None None unknown None CD3D, TRDC, ID2, KLRD1
Homeostatic Chodrocyte unknown unknown knee None None unknown None MMP3, CCL2, RCAN1
Hypertrophic Chondrocyte unknown unknown knee None None unknown None IBSP, SPP1, COL10A1
ILF lymphatic endothelium unknown unknown large intestine None None unknown None LYVE-1
ILV high endothelial venule endothelium unknown unknown large intestine None None unknown None MADCAM1
Inh L1 LAMP5 BMP2 unknown unknown brain None None unknown None COL5A2, FREM1
Inh L1 LAMP5 NMBR unknown unknown brain None None unknown None PCDH18, RELN
Inh L1 LAMP5 PVRL2 unknown unknown brain None None unknown None CBLN4, HS3ST5, RELN, TRPC3
Inh L1 LAMP5 RAB11FIP1 unknown unknown brain None None unknown None ADAMTS20, FREM1, MYH11
Inh L1 PAX6 CHRFAM7A unknown unknown brain None None unknown None CHRNA7, CNR1, LINC01539
Inh L1 PAX6 MIR101-1 unknown unknown brain None None unknown None RELN, TGFBR2
Inh L1 PVALB SST ASIC4 unknown unknown brain None None unknown None ADAM33, NCKAP5, PRELID2
Inh L1 SST DEFB108B unknown unknown brain None None unknown None NDST4, SYT10
Inh L1 SST P4HA3 unknown unknown brain None None unknown None ARHGAP42, FOXO1, ST8SIA6
Inh L1 VIP KLHDC8B unknown unknown brain None None unknown None ITGBL1, SLITRK4
Inh L1-2 PVALB CDK20 unknown unknown brain None None unknown None ADAMTS12, SYT10, TMEM132C
Inh L1-2 SST CCNJL unknown unknown brain None None unknown None CALB1, SPHKAP, TMEM132C
Inh L1-2 SST CLIC6 unknown unknown brain None None unknown None ARHGAP42, NEDD4, TAC1
Inh L1-2 SST PRRT4 unknown unknown brain None None unknown None LOC101927843, LOC101929028
Inh L1-2 VIP EXPH5 unknown unknown brain None None unknown None SCTR, ST18
Inh L1-2 VIP HTR3A unknown unknown brain None None unknown None HTR3A, LOC105373642
Inh L1-2 VIP PTGER3 unknown unknown brain None None unknown None KCNH8, PARD3B, SYT10
Inh L1-2 VIP SCML4 unknown unknown brain None None unknown None ABI3BP, KCNH8, LOC100506497
Inh L1-2 VIP WNT4 unknown unknown brain None None unknown None LOC105379064, SYT9
Inh L1-3 SST FAM20A unknown unknown brain None None unknown None PCSK5, TAC1
Inh L1-3 VIP CBLN1 unknown unknown brain None None unknown None HTR2C, LOC284825, TAC3
Inh L1-3 VIP CHRNA2 unknown unknown brain None None unknown None EYA4, LOC105373642, PPP1R1C
Inh L1-3 VIP FNDC1 unknown unknown brain None None unknown None KCNH8, LOC101927286, LOC101928842
Inh L1-3 VIP HSPB6 unknown unknown brain None None unknown None CCNG2, IGFBP5
Inh L1-5 VIP CD27-AS1 unknown unknown brain None None unknown None ANKFN1, EGFEM1P, IQGAP2
Inh L1-5 VIP LINC01013 unknown unknown brain None None unknown None DACH2, SRGAP1, THSD7B
Inh L1-5 VIP PHLDB3 unknown unknown brain None None unknown None EGF, THSD7B
Inh L1-5 VIP SMOC1 unknown unknown brain None None unknown None ANGPT1, SMOC1, VIP
Inh L1-6 LAMP5 AARD unknown unknown brain None None unknown None FBXL7, FREM1, KIT, PRELID2
Inh L1-6 LAMP5 CA1 unknown unknown brain None None unknown None HS3ST4, NOS1
Inh L1-6 LAMP5 NES unknown unknown brain None None unknown None EPHA3, EYA4, KIT, NTNG1, RO
Inh L1-6 PVALB COL15A1 (Chandelier) unknown unknown brain None None unknown None COL15A1, NPNT
Inh L1-6 SST NPY (Sst Chodl) unknown unknown brain None None unknown None NPY
Inh L1-6 VIP SLC7A6OS unknown unknown brain None None unknown None CNR1, PBX3
Inh L2 PAX6 FREM2 unknown unknown brain None None unknown None CILP2, IGFBP7
Inh L2 PVALB FRZB unknown unknown brain None None unknown None CBLN4, RGS5, SLC9A9
Inh L2 VIP SLC6A16 unknown unknown brain None None unknown None KCNT2, LOC105370456
Inh L2-3 SST NMU unknown unknown brain None None unknown None HPSE2, NOS1, PIEZO2
Inh L2-5 PVALB HHIPL1 unknown unknown brain None None unknown None ADAMTS17, ADAMTS20, MDFIC
Inh L2-5 PVALB RPH3AL unknown unknown brain None None unknown None ARHGAP42, MYO5B, POSTN, WIF1
Inh L2-5 VIP BSPRY unknown unknown brain None None unknown None LOC101927078, PDE3A, ST18
Inh L2-5 VIP SOX11 unknown unknown brain None None unknown None ADAMTSL1, HTR2C, THSD7B
Inh L3 PVALB SAMD13 unknown unknown brain None None unknown None LOC101928964, SULF1
Inh L3-5 PVALB ISG20 unknown unknown brain None None unknown None LOC101926942, LOC105377862, SV2C
Inh L3-5 SST CDH3 unknown unknown brain None None unknown None FREM1, NPNT, QRFPR
Inh L3-5 SST GGTLC3 unknown unknown brain None None unknown None EYS, RELN
Inh L3-5 SST OR5AH1P unknown unknown brain None None unknown None ADAMTS5, FBXL7, SST
Inh L3-5 VIP HS3ST3A1 unknown unknown brain None None unknown None ABI3BP, IQGAP2, SLC22A3
Inh L3-5 VIP IGDCC3 unknown unknown brain None None unknown None EREG, NOX4
Inh L3-5 VIP TAC3 unknown unknown brain None None unknown None COL19A1, SOX2-OT, TSHZ2
Inh L3-6 PAX6 LINC01497 unknown unknown brain None None unknown None PALMD, RELN
Inh L3-6 VIP UG0898H09 unknown unknown brain None None unknown None GALNT10, LINC01411, LOC105373454
Inh L3-6 VIP ZIM2-AS1 unknown unknown brain None None unknown None CXCL14, PENK
Inh L5 PVALB LRIG3 unknown unknown brain None None unknown None CDH6, GPC5, PLCE1
Inh L5 SST RPL35AP11 unknown unknown brain None None unknown None EDNRA, FREM1, TRHDE
Inh L5-6 LAMP5 CRABP1 unknown unknown brain None None unknown None LOC105379168, PDGFD
Inh L5-6 PVALB FAM150B unknown unknown brain None None unknown None ALKAL2, MYBPC1, TNC
Inh L5-6 PVALB GAPDHP60 unknown unknown brain None None unknown None GPC5, MYBPC1, SEMA3C
Inh L5-6 PVALB KCNIP2 unknown unknown brain None None unknown None GPC5, NPFFR2, VAV3
Inh L5-6 PVALB MEPE unknown unknown brain None None unknown None MEPE, MYBPC1, SVIL
Inh L5-6 PVALB SST CRHR2 unknown unknown brain None None unknown None HPGD, RGS5, SPON1
Inh L5-6 PVALB ZFPM2-AS1 unknown unknown brain None None unknown None PCDH15, SEMA6D, ZFPM2-AS1
Inh L5-6 SST BEAN1 unknown unknown brain None None unknown None ADAMTSL1, SEMA5A, THSD7B, TRHDE
Inh L5-6 SST C4orf26 unknown unknown brain None None unknown None ADAMTS20, PENK, SPON1
Inh L5-6 SST DNAJC14 unknown unknown brain None None unknown None HGF, ITGA1, STON2
Inh L5-6 SST FBN2 unknown unknown brain None None unknown None HCRTR2, KLHL1
Inh L5-6 SST ISX unknown unknown brain None None unknown None COL19A1, TRPM3
Inh L5-6 SST KLHL1 unknown unknown brain None None unknown None KLHL14, NDST4, SLC17A8
Inh L5-6 SST PAWR unknown unknown brain None None unknown None EPB41L4A, NDST4, TRHDE
Inh L5-6 SST PIK3CD unknown unknown brain None None unknown None KLHL14, LOC100996671
Inh L5-6 VIP COL4A3 unknown unknown brain None None unknown None ABI3BP, KCTD12, PARD3B
Inh L6 SST TH unknown unknown brain None None unknown None LOC100128108, TH
Interstitial macrophage unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, SIGLEC1, MRC1, CD163, STAB1, ITGAM, IGSF21, FOLR2
L5ET_113 unknown unknown brain None None unknown None LINC02424, LINC00943
L5ET_114 unknown unknown brain None None unknown None LINC00326, RP11-370K2.1, CTB-57H20.1
L5ET_115 unknown unknown brain None None unknown None XIST, CSN1S1
L5ET_117 unknown unknown brain None None unknown None GABRQ, LRP2, RP11-622O11.6
L5ET_118 unknown unknown brain None None unknown None CSN1S1, LRP2, RP4-678D15.1
LLC_264 unknown unknown brain None None unknown None COL15A1, CRH, RP11-238K6.2
LLC_265 unknown unknown brain None None unknown None PTHLH, RP11-238K6.2
LLC_266 unknown unknown brain None None unknown None C1QL1, UNC5B, GRIN2C
LLC_267 unknown unknown brain None None unknown None DDR2, MET, CHST9
LLC_268 unknown unknown brain None None unknown None TACR1, EYA4, CHST9, CMTM8
LLC_269 unknown unknown brain None None unknown None IFI44, ISM1, CHST9
LLC_270 unknown unknown brain None None unknown None NOS1, TAC1, ADAMTS9-AS2, PREX2, ARHGAP6
LLC_271 unknown unknown brain None None unknown None ADGRG6, SFRP1, RP11-563D10.1
LLC_272 unknown unknown brain None None unknown None FREM2, SFRP1, PDGFD, LAMP5
LLC_273 unknown unknown brain None None unknown None LRP2, FBN2, CHST9, RP11-563D10.1
LLC_274 unknown unknown brain None None unknown None NFIA-AS2, FBN2, CTC-806A22.1
LLC_275 unknown unknown brain None None unknown None SFRP1, PDGFD, CA2, CXCL14
LRL_315 unknown unknown brain None None unknown None TENT5A, MME, SMOC1
LRL_316 unknown unknown brain None None unknown None ADAMTS20, EYA2, BTNL9
LRL_317 unknown unknown brain None None unknown None BMP5, LINC00836, RP11-46H14.1, RP11-321P16.3
LRL_318 unknown unknown brain None None unknown None LINC00836, CTXN3, RP11-46H14.1
LRL_319 unknown unknown brain None None unknown None LINC00355, FAM114A1
LRL_320 unknown unknown brain None None unknown None TINAG, SYT10, THSD7B
LRL_321 unknown unknown brain None None unknown None ADGRL4, VEPH1, LINC01798, RP11-649A16.1
LRL_322 unknown unknown brain None None unknown None LINC01982, SLC5A7
Lymphatic Endothelial Cell unknown unknown lymph node None None unknown None CD209, CLEC4G, CLEC4M, LYVE1, MARCO
Lymphatic Endothelial Cell unknown unknown lymph node None None unknown None ACKR4, CAV1, NUDT4, NT5E
Lymphatic Endothelial Cell -Subcapsular Sinus Ceiling unknown unknown lymph node None None unknown None ACKR4, CAV1, NUDT4, NT5E
Lymphatic Endothelial Cell of Medulla Ceiling unknown unknown lymph node None None unknown None ACKR4, LYVE1, MFAP4, NT5E
Lymphatic Endothelial Cell-Subcapsular Sinus Floor unknown unknown lymph node None None unknown None CCL20, CXCL1, CXCL5, DARC, LYZ, MARCO, TNFRSF9, THY1
Lymphatic Endothelial Cell-Trabeculae unknown unknown lymph node None None unknown None ACKR4, LYVE1, MFAP4, NT5E
MGE_236 unknown unknown brain None None unknown None PRTG, MYO5B, TAC1
MGE_239 unknown unknown brain None None unknown None PIEZO2, HPSE2, RP11-656G20.1
MGE_240 unknown unknown brain None None unknown None FBN2, TAFA4, SYT10, RP11-656G20.1
MGE_241 unknown unknown brain None None unknown None BMP6, SOX6, ANKRD30B, RP11-656G20.1
MGE_242 unknown unknown brain None None unknown None MCUB, FBN2, MME, SOX6, ADAMTSL1
MGE_243 unknown unknown brain None None unknown None PENK, CALB1, EYA4, CTD-2533K21.4
MGE_244 unknown unknown brain None None unknown None NPY, TAC3, CBLN4
MGE_245 unknown unknown brain None None unknown None NPY, FBN2, RP11-656G20.1
MGE_246 unknown unknown brain None None unknown None SST, LINC02008, MAF
MGE_247 unknown unknown brain None None unknown None LPAR1, COL5A2, CTD-2288O8.3
MGE_248 unknown unknown brain None None unknown None DCN, TAC1, RP11-799O21.2
MGE_249 unknown unknown brain None None unknown None TRPC7, SST, RSPO3, SOX6, SEMA3A
MGE_250 unknown unknown brain None None unknown None PROM1, ADGRG6, ADAMTS9-AS2
MGE_251 unknown unknown brain None None unknown None SST, ADGRG6, RELN, RP11-387P12.1
MGE_252 unknown unknown brain None None unknown None EDNRA, TAC3, ABC10-43608400O15.1
MGE_253 unknown unknown brain None None unknown None SST, VCAN, TRPC6, CTC-535M15.2, CTC-340A15.2
MGE_254 unknown unknown brain None None unknown None ADAMTS20, NPAS1, FBN2
MGE_255 unknown unknown brain None None unknown None HGF, BCHE, RP11-238K6.2
MGE_256 unknown unknown brain None None unknown None MYBPC1, SHISA8, ADAMTS17
MGE_257 unknown unknown brain None None unknown None MEPE, RGS5_ENSG00000143248
MGE_258 unknown unknown brain None None unknown None WNT16, SST, PAWR
MGE_259 unknown unknown brain None None unknown None ANOS1, RGS5_ENSG00000143248, BTBD11
MGE_260 unknown unknown brain None None unknown None IQGAP2, TAFA4, CTXND1
MGE_261 unknown unknown brain None None unknown None ADAMTS17, PVALB, CEMIP, AC133680.1
MGE_262 unknown unknown brain None None unknown None PIEZO2, SULF1, ADAMTS9-AS2, RP1-35C21.2
MGE_263 unknown unknown brain None None unknown None SULF1, PVALB, AC133680.1, RP11-875G18.1
MSN_206 unknown unknown brain None None unknown None GLI3, EBF1, AC002066.1, RP11-640F22.1
MSN_207 unknown unknown brain None None unknown None DRD2, MME, LINC01378
MSN_208 unknown unknown brain None None unknown None PENK, SH3RF2, RP1-71H24.1
MSN_209 unknown unknown brain None None unknown None LINC02137, SH3RF2, DRD1, RP11-358P11.1
MSN_210 unknown unknown brain None None unknown None LINC02137, LINC02822, RP11-286O1.1
MSN_211 unknown unknown brain None None unknown None DRD1, PTPRQ, RP11-640F22.1
MSN_212 unknown unknown brain None None unknown None PENK, RP11-358P11.1, RP5-1180C18.1
MSN_213 unknown unknown brain None None unknown None LINC00534, PENK
MSN_214 unknown unknown brain None None unknown None DRD1, LINC01117, STAC
MSN_215 unknown unknown brain None None unknown None DRD1, RP11-829H16.3, RP11-875G18.1
MSN_216 unknown unknown brain None None unknown None DRD2, PENK, EYA2, RP11-97F8.2, CTC-340A15.2
MSN_217 unknown unknown brain None None unknown None DCDC2C, PENK
MSN_218 unknown unknown brain None None unknown None DRD3, MME, RP11-142I20.2
MSN_219 unknown unknown brain None None unknown None ISL1, CXCL14, FOXP2
MSN_220 unknown unknown brain None None unknown None ISL1, MKX, PCSK6
MSN_221 unknown unknown brain None None unknown None DRD2, RP11-111G13.1, CTC-535M15.2
MSN_427 unknown unknown brain None None unknown None ISL1, GABRG1, CTC-552D5.1
MSN_430 unknown unknown brain None None unknown None PENK, GABRG1
Macrophage unknown unknown lymph node None None unknown None CD4, CD14, HLA-DRA, ITGAX
Marginal Reticular Cell unknown unknown lymph node None None unknown None CXCL13, ENPP2, TNFSF11
Mast Cell unknown unknown lymph node None None unknown None KIT, MS4A2, TPSAB1, TPSB2
Mast Cell unknown unknown lymph node None None unknown None KIT, TPSB2, TPSAB1, MS4A2
Medial Excitatory Neuron 1 unknown unknown spinal cord None None unknown None ZFHX3, TAC1, LMX1B
Medial Excitatory Neuron 2 unknown unknown spinal cord None None unknown None NFIX, SATB2, TAC3
Medial Excitatory Neuron 3 unknown unknown spinal cord None None unknown None NFIX, PRDM8, CDH23
Medial Excitatory Neuron 4 unknown unknown spinal cord None None unknown None ZFHX3, ISL1
Medial Inhibitory Neuron 1 unknown unknown spinal cord None None unknown None GAD2, TFAP2B
Medullary Reticular Cell unknown unknown lymph node None None unknown None CXCL12, TNFSF11
Megakaryocyte unknown unknown Bone marrow None None unknown None GP9, CAVIN2, PPBP, LAT, PF4, CLEC1B, ITGA2B
Memory B Cell unknown unknown lymph node None None unknown None CD19, MS4A1, HLA-DRA
Memory CD4+ T cell unknown unknown lymph node None None unknown None CD3D, CXCR6, ITGA1
Memory CD8+ T cell unknown unknown lymph node None None unknown None CD3D, CD8A, CXCR6, ITGA1
Merkel unknown unknown large intestine None None unknown None keratin 20, chromogranin A, synaptophysin
Mgl_10 unknown unknown brain None None unknown None LNCAROD, P2RY12, DOCK8
Mgl_11 unknown unknown brain None None unknown None LINC02642, LINC02712, P2RY12
Mgl_12 unknown unknown brain None None unknown None MRC1, F13A1
Mgl_4 unknown unknown brain None None unknown None HIF1A-AS3, SRGN
Mgl_5 unknown unknown brain None None unknown None APBB1IP, TTR
Mgl_6 unknown unknown brain None None unknown None ITGAX, SCIN, LINC00278
Mgl_7 unknown unknown brain None None unknown None OLR1, CX3CR1, LINC02712
Mgl_8 unknown unknown brain None None unknown None CCDC26, LNCAROD, CX3CR1
Mgl_9 unknown unknown brain None None unknown None AIF1, CX3CR1, LINC02712
Micro L1-6 TYROBP CD74 unknown unknown brain None None unknown None APBB1IP, P2RY12
Microglia unknown unknown spinal cord None None unknown None AIF1
Midi_433 unknown unknown brain None None unknown None OTX2-AS1, PRSS12, HHIP, RELN
Midi_434 unknown unknown brain None None unknown None CTXN3, NPPC, NPSR1-AS1
Midi_435 unknown unknown brain None None unknown None NPSR1, TRPC7, LTBP1, NR2F2-AS1
Midi_436 unknown unknown brain None None unknown None HMCN1, OTX2-AS1, BMPR1B
Midi_437 unknown unknown brain None None unknown None OTX2-AS1, BMPR1B, RORB, CH17-174L20.1
Midi_438 unknown unknown brain None None unknown None NPSR1, NPPC, AC010091.1
Midi_439 unknown unknown brain None None unknown None OTX2-AS1, LINC02055, PRSS12, SEMA3C
Midi_440 unknown unknown brain None None unknown None MYO3B, OTX2-AS1, LINC02055
Midi_441 unknown unknown brain None None unknown None MYO3B, PLEKHH2, CRNDE
Midi_442 unknown unknown brain None None unknown None TSPAN12, CASR, NPSR1
Midi_443 unknown unknown brain None None unknown None VASH2, NPPC, LINC02552, OTX2-AS1
Midi_444 unknown unknown brain None None unknown None PLEKHH2, OTX2-AS1, LINC02552, SEMA3C, SYT2
Misc_116 unknown unknown brain None None unknown None ERG, PCSK6, ATP10A, FAM160A1
Misc_132 unknown unknown brain None None unknown None CD53, ETS1, RORB
Misc_164 unknown unknown brain None None unknown None LINC01482, LINC02653, LINC01885, RP11-369E15.3
Misc_165 unknown unknown brain None None unknown None LINC02752, RP11-60A8.1
Misc_166 unknown unknown brain None None unknown None C10orf90, RP11-537P24.1
Misc_167 unknown unknown brain None None unknown None ANO2, TRPC6, TSHZ2, RP4-678D15.1
Misc_168 unknown unknown brain None None unknown None SCHLAP1, DCN
Misc_170 unknown unknown brain None None unknown None DCN, GRB14
Misc_176 unknown unknown brain None None unknown None CARM1P1, FREM2, COBLL1, RP11-719N9.1
Misc_177 unknown unknown brain None None unknown None VIPR2, CALCRL, COBLL1, RP11-719N9.1, CTC-535M15.2
Misc_178 unknown unknown brain None None unknown None RP11-370B11.4, RP11-719N9.1, CTC-535M15.2, CTC-340A15.2
Misc_314 unknown unknown brain None None unknown None PCP2
Misc_401 unknown unknown brain None None unknown None SOX11, CCBE1, NR2F2-AS1
Misc_404 unknown unknown brain None None unknown None LINC02306, LINC02263, AC011288.2
Mmb_323 unknown unknown brain None None unknown None TAC1, RP11-284G10.1, RP3-401D24.1
Mmb_324 unknown unknown brain None None unknown None LINC00410, RBMS3-AS2, TAC1
Mmb_325 unknown unknown brain None None unknown None FSHR, LINC00410, RP11-460M2.1, RP3-401D24.1
Mmb_326 unknown unknown brain None None unknown None SIM1, PITX2, CRHBP, RP3-401D24.1
Mmb_327 unknown unknown brain None None unknown None LINC00410, TAFA4, RP3-401D24.1
Mmb_328 unknown unknown brain None None unknown None LINC00410, CFAP299
Mmb_329 unknown unknown brain None None unknown None SIM1, LINC02196, PRLR, FBXL7
Mmb_330 unknown unknown brain None None unknown None PITX2, NTNG1, RP3-401D24.1
Mmb_331 unknown unknown brain None None unknown None PITX2, SEMA3C, RP11-115D10.1
Mmb_332 unknown unknown brain None None unknown None SIM1, FRMPD2, ONECUT2, MYO1B
Mmb_333 unknown unknown brain None None unknown None SIM1, CD36, LTBP1
Mono_3 unknown unknown brain None None unknown None FCN1
Monocyte Derived Cell unknown unknown kidney None None unknown None MSR1, ITGAX, HLA-DQA1, HLA-DRB1, CSF2RA, CD14, TRPM2
Monocytoid B Cell unknown unknown lymph node None None unknown None AICDA, CD19, IGHM
Myeloid progenitor unknown unknown Bone marrow None None unknown None SPI1, IRF8, CEBPB, KLF4
Myofibroblast unknown unknown lymph node None None unknown None ACTA2, COL1A1, COL3A1
NK CD56bright unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, IL7R, SPTSSB, XCL1, XCL2, CD56
NK cell unknown unknown large intestine None None unknown None CD56, CD57, CD11c, NKG2D
Naive B Cell unknown unknown lymph node None None unknown None CD19, MS4A1, IGHD, FCER2, HLA-DRA, SELL
Naive CD4+ T cell unknown unknown lymph node None None unknown None CD3D, CCR7, SELL
Naive CD8+ T cell unknown unknown lymph node None None unknown None CD3D, CD8A, CCR7, SELL
Natural Killer Cell unknown unknown lymph node None None unknown None ID2, KLRD1
Nkcell_2 unknown unknown brain None None unknown None GNLY, NKG7
OPC L1-6 PDGFRA COL20A1 unknown unknown brain None None unknown None FAM222A, KIF25, TGFA
OPC_32 unknown unknown brain None None unknown None MROH9, RP1-45C12.1
OPC_33 unknown unknown brain None None unknown None OLIG1, APOD, RP1-45C12.1
OPC_34 unknown unknown brain None None unknown None OLIG1, RP4-668E10.4, RP11-197H3.1
OPC_35 unknown unknown brain None None unknown None OLIG1, MIR3681HG, RP4-668E10.4
OPC_36 unknown unknown brain None None unknown None LINC01608, RP4-668E10.4
Oligo L2-6 OPALIN FTH1P3 unknown unknown brain None None unknown None STK32A, VCAN
Oligo L2-6 OPALIN MAP6D1 unknown unknown brain None None unknown None ENPP2, LOC101927459
Oligo L3-6 OPALIN ENPP6 unknown unknown brain None None unknown None ENPP2, LINC01378, MBP, ST18
Oligo L5-6 OPALIN LDLRAP1 unknown unknown brain None None unknown None LOC105376917, OPALIN, OBI1-AS1
Oligo_40 unknown unknown brain None None unknown None OPALIN, PLP1, ERBB4
Oligo_44 unknown unknown brain None None unknown None SLC5A11, ANLN, CARNS1, TF, MOBP
Oligo_45 unknown unknown brain None None unknown None SLC5A11, OPALIN, MOBP, CERCAM
Oligo_46 unknown unknown brain None None unknown None LINC01608, RNASE1, CNDP1
Oligo_47 unknown unknown brain None None unknown None OPALIN, LINC01608, PLP1
Oligo_48 unknown unknown brain None None unknown None OPALIN, RP11-38B6.1
Oligo_49 unknown unknown brain None None unknown None SLC5A11, CARNS1, TF, CRYAB, AC084149.2
Oligo_50 unknown unknown brain None None unknown None PTCSC3, SLC5A11
Oligodendrocyte unknown unknown spinal cord None None unknown None MOG
Oligodendrocyte Precursor Cell unknown unknown spinal cord None None unknown None BEST3
Paneth unknown unknown large intestine None None unknown None DEFA5
Paneth unknown unknown large intestine None None unknown None defensin alpha 5
Paneth cell unknown unknown Small Intestine None None unknown None LYZ, DEFA5
Per_21 unknown unknown brain None None unknown None NDUFA4L2, RERGL
Per_22 unknown unknown brain None None unknown None CARMN, SLC19A1
Per_23 unknown unknown brain None None unknown None ASPN, SLC6A12, SLC6A13
Pericyte unknown unknown lymph node None None unknown None PDGFRalpha+, PDGFRbeta+
Plasma Cell unknown unknown lymph node None None unknown None CD38, IRF4, PRDM1, SDC1
Plasmablast unknown unknown lymph node None None unknown None CD38, IRF4, PRDM1, SDC1
Plasmacytoid Dendritic Cell unknown unknown Bone marrow None None unknown None GZMB, JCHAIN, SERPINF1
Plasmacytoid Dendritic Cell unknown unknown lymph node None None unknown None IL3RA, CLEC4C, GZMB, IGJ
Plasmacytoid Dendritic Cell (pDC) unknown unknown Blood None None unknown None GZMB, JCHAIN, SERPINF1
Prefibrocartilage Chondrocyte unknown unknown knee None None unknown None PRG4, COL2A1, CTHRC1
Prehypertrophic Chondrocyte unknown unknown knee None None unknown None FST, C11orf96, INHBA
Regulatory Chondrocyte 1 unknown unknown knee None None unknown None ANGPTL4, CHI3L1, CHI3L2
Regulatory Chondrocyte 2 unknown unknown knee None None unknown None MT1G, MT1E, MT1H
Reparative Chondrocyte unknown unknown knee None None unknown None CILP, LOX, ACAN
SOX9+ epithelial cell unknown unknown Uterus None None unknown None EPCAM, SOX9, MMP7
Smooth Muscle Cell unknown unknown lymph node None None unknown None ACTA2
Splat_235 unknown unknown brain None None unknown None NPY, NOS1
Splat_237 unknown unknown brain None None unknown None BCHE, PDGFD, CMTM8
Splat_238 unknown unknown brain None None unknown None ST18, IL1RAPL2
Splat_313 unknown unknown brain None None unknown None LINC02770, RP11-410K21.2
Splat_334 unknown unknown brain None None unknown None GNG8, POU4F1
Splat_335 unknown unknown brain None None unknown None HSPD1P8, AC003099.2
Splat_336 unknown unknown brain None None unknown None FAM83B, ONECUT1
Splat_337 unknown unknown brain None None unknown None ONECUT1, C5orf64, TAFA4
Splat_338 unknown unknown brain None None unknown None HOXD3, FSHR, RP11-354K4.2
Splat_339 unknown unknown brain None None unknown None SLC6A5, LINC01798, MEIS1
Splat_340 unknown unknown brain None None unknown None ONECUT1, LHX9, LINC01798
Splat_341 unknown unknown brain None None unknown None LINC01036, EBF2, EBF3
Splat_342 unknown unknown brain None None unknown None LINC01036, LINC02306
Splat_343 unknown unknown brain None None unknown None CASZ1, EBF2, HOXB3
Splat_344 unknown unknown brain None None unknown None EBF3, DOCK8, AC067959.1
Splat_345 unknown unknown brain None None unknown None LMX1B, HOXB3, RP11-221G19.1
Splat_346 unknown unknown brain None None unknown None ITGA11, LMX1B
Splat_347 unknown unknown brain None None unknown None PAX2, HOXB3, EBF3
Splat_348 unknown unknown brain None None unknown None HOXD3, SALL3
Splat_349 unknown unknown brain None None unknown None HOXD3, TSPAN18, AC079135.1
Splat_350 unknown unknown brain None None unknown None SLC6A5, TTR, ADAMTSL1, HTR2C
Splat_351 unknown unknown brain None None unknown None LINC00261, OTX2-AS1
Splat_352 unknown unknown brain None None unknown None LINC01210, LHX1, EBF3, GATA3
Splat_353 unknown unknown brain None None unknown None HPGD, GATA3, CTC-535M15.2
Splat_354 unknown unknown brain None None unknown None LHX1, TCF7L2, RP11-66G15.1
Splat_355 unknown unknown brain None None unknown None KIZ-AS1, GATA3, ZFPM2-AS1, TRHDE
Splat_356 unknown unknown brain None None unknown None GATA3, SATB1-AS1, CTC-535M15.2
Splat_357 unknown unknown brain None None unknown None EMX2, TFAP2B, LEF1
Splat_358 unknown unknown brain None None unknown None TFAP2B, GATA3, GRIK1, ZFHX3, TAFA1
Splat_359 unknown unknown brain None None unknown None TFAP2B, OTX2-AS1, LEF1
Splat_360 unknown unknown brain None None unknown None OTX2, LEF1, NDST4
Splat_361 unknown unknown brain None None unknown None GATA3, SIX3, TAC1
Splat_362 unknown unknown brain None None unknown None PREX2, PTPRK, FSTL5, LUZP2
Splat_363 unknown unknown brain None None unknown None EBF2, ST8SIA6, NR2F2-AS1
Splat_364 unknown unknown brain None None unknown None TFAP2D, NDST4, CTC-340A15.2
Splat_365 unknown unknown brain None None unknown None HTR2C, ZFHX3, MEIS2, GNAS, CALM1, CNTN1
Splat_366 unknown unknown brain None None unknown None EBF3, KLHL1, DACH1, TCF7L2
Splat_367 unknown unknown brain None None unknown None TAC1, PRLR, TCF7L2
Splat_368 unknown unknown brain None None unknown None EBF3, EBF1, TCF7L2, SNHG14
Splat_369 unknown unknown brain None None unknown None TFAP2B, LHX9, RP4-678D15.1
Splat_370 unknown unknown brain None None unknown None EBF2, LGR5, EBF3, LEF1
Splat_371 unknown unknown brain None None unknown None CPA6, NPSR1, BNC2
Splat_373 unknown unknown brain None None unknown None SHOX2, PDGFD, LHX2, TCF7L2
Splat_374 unknown unknown brain None None unknown None TFAP2B, LMX1A
Splat_375 unknown unknown brain None None unknown None POU4F1, CRNDE, CBLN2
Splat_376 unknown unknown brain None None unknown None ZFHX3, RP11-491F9.1
Splat_377 unknown unknown brain None None unknown None LHX1, DIRAS3, ZIC2
Splat_378 unknown unknown brain None None unknown None ONECUT1, ISL1
Splat_379 unknown unknown brain None None unknown None OTP, SLC6A5, EBF2
Splat_380 unknown unknown brain None None unknown None SLC6A5, EBF3, NXPH2, HTR2C
Splat_381 unknown unknown brain None None unknown None OTP, EBF2, EBF1
Splat_382 unknown unknown brain None None unknown None SST, RSPO3, TCF7L2
Splat_383 unknown unknown brain None None unknown None EBF2, LMX1A, PITX2
Splat_384 unknown unknown brain None None unknown None CDH23, PITX2, LMX1A
Splat_385 unknown unknown brain None None unknown None AR, LMX1A
Splat_386 unknown unknown brain None None unknown None TACR3, HOXB3, NR4A2
Splat_387 unknown unknown brain None None unknown None PAX5, EBF2
Splat_388 unknown unknown brain None None unknown None LINC01798, LAMA1, NPFFR2
Splat_389 unknown unknown brain None None unknown None GATA3, DACH1, FIGN
Splat_390 unknown unknown brain None None unknown None POU6F2, ZIC1, NRXN3, SNHG14
Splat_391 unknown unknown brain None None unknown None PDGFD, ST18, CDH12, CTC-535M15.2, CTC-340A15.2
Splat_392 unknown unknown brain None None unknown None FGF10, LHX6
Splat_393 unknown unknown brain None None unknown None ISL1, SIX3, RNF220
Splat_394 unknown unknown brain None None unknown None LINC01798, LHX9, NPNT
Splat_395 unknown unknown brain None None unknown None SLC6A3
Splat_396 unknown unknown brain None None unknown None LMX1B, GATA3, SEMA3D
Splat_397 unknown unknown brain None None unknown None SLC6A4, TPH2
Splat_398 unknown unknown brain None None unknown None PHOX2B, CRNDE
Splat_399 unknown unknown brain None None unknown None TFAP2B, RNF220, MEIS2
Splat_400 unknown unknown brain None None unknown None LHX8, SLC5A7
Splat_402 unknown unknown brain None None unknown None LMNTD1, SST, LINC02822
Splat_403 unknown unknown brain None None unknown None FRMD7, PCBP3
Splat_409 unknown unknown brain None None unknown None GLP1R, TAC3, ST18
Splat_410 unknown unknown brain None None unknown None AVP
Splat_411 unknown unknown brain None None unknown None PPP1R17, RORB, PDE3A
Splat_412 unknown unknown brain None None unknown None ISL1, LEF1, RP11-964E11.3
Splat_413 unknown unknown brain None None unknown None SIM1, PITX2, CTC-340A15.2
Splat_414 unknown unknown brain None None unknown None OTP, SIM1, RP11-964E11.3
Splat_415 unknown unknown brain None None unknown None PEG10, GNAS
Splat_416 unknown unknown brain None None unknown None HMX3, ISL1, DIRAS3
Splat_417 unknown unknown brain None None unknown None DLK1, OTP, ISL1
Splat_418 unknown unknown brain None None unknown None FEZF1, RP11-964E11.3
Splat_420 unknown unknown brain None None unknown None OTP, ZIC1, CTC-552D5.1
Splat_421 unknown unknown brain None None unknown None ESR1, STK32B
Splat_422 unknown unknown brain None None unknown None TMEM255A, LHX6, PEG10, ADARB2
Splat_423 unknown unknown brain None None unknown None PROX1, SOX6, TSHZ2
Splat_424 unknown unknown brain None None unknown None CYP19A1, LHX6, NR2F2, ZBTB7C
Splat_425 unknown unknown brain None None unknown None ESR1, LHX6, NR2F2-AS1, SATB1-AS1
Splat_428 unknown unknown brain None None unknown None FREM2, STK32B, RP11-649A16.1
Splat_429 unknown unknown brain None None unknown None FREM2, PRDM16, MYO5B
Splat_431 unknown unknown brain None None unknown None PGR, TBX3
Splat_432 unknown unknown brain None None unknown None HDC
Sympathetic Neuron unknown unknown lymph node None None unknown None NCAM1, UCHL1
T Cell unknown unknown lymph node None None unknown None CD3D, CD4
T Cell unknown unknown lymph node None None unknown None CD3D, CD8A
T Cell Zone Reticular Cell unknown unknown lymph node None None unknown None CCL19, CCL21, IL7
T Cytotoxic Cell unknown unknown lymph node None None unknown None CD3D, CD8A, GZMB, GZMK
T Follicular Helper Cell unknown unknown lymph node None None unknown None CD3D, CD4, CXCR5, MAF, PDCD1
T Follicular Regulatory Cell unknown unknown lymph node None None unknown None CD3D, CD4, CXCR5, FOXP3, IL2RA
T Regulatory Cell unknown unknown lymph node None None unknown None FOXP3, IL2RA, CTLA4
T cell unknown unknown Uterus None None unknown None CD69, HMGB2, CD3G, IL7R, CXCR4, CCL5
T follicular helper cell unknown unknown thoracic thymus None None unknown None ALG13, CCNH, DDIT4, EIF4A3, FAM177A1, FLT3LG, FOSB, IL7R, NDUFV2, NR4A2
T helper unknown unknown large intestine None None unknown None CD3, CD4
T helper unknown unknown large intestine None None unknown None CD3, CD8
T killer unknown unknown large intestine None None unknown None CD3, CD8
T killer unknown unknown large intestine None None unknown None CD3, CD4, FOXP3
T reg unknown unknown large intestine None None unknown None CD3, CD4, FOXP3
T reg unknown unknown large intestine None None unknown None CD19, CD79a
T regulatory unknown unknown Blood None None unknown None TRAC, TRBC1, IL7R, TRAT1, LTB, AQP3, FOXP3, TNFRSF25, TIGIT, CCR6, TNFRSF4
T regulatory unknown unknown Bone marrow None None unknown None TRAC, TRBC1, IL7R, TRAT1, LTB, AQP3, FOXP3, TNFRSF25, TIGIT, CCR6, TNFRSF4
TBet low Liver NK cell unknown unknown liver None None unknown None TBX21, eomes
Tcell_1 unknown unknown brain None None unknown None CD2, THEMIS
Th1 cell unknown unknown lymph node None None unknown None CD3D, IL7R, ID2
Th17 cell unknown unknown lymph node None None unknown None CD3D, CCR6, IL7R, ID2
Th17 cell unknown unknown thoracic thymus None None unknown None ANXA1, CARHSP1, CD40LG, IL7R, KLRB1, NOSIP, PLAC8, SORL1, ZBTB16
Th2 cell unknown unknown lymph node None None unknown None CD3D, IL7R, ID2
Thex_372 unknown unknown brain None None unknown None FAM9B, PTH2R, RNF220, TCF7L2
Thex_445 unknown unknown brain None None unknown None MAP3K20, KCNH8, RP11-354K4.2
Thex_446 unknown unknown brain None None unknown None DCDC2C, RP11-354K4.2
Thex_447 unknown unknown brain None None unknown None LINC01695, ST8SIA6, TGFBR2, KCNH8
Thex_448 unknown unknown brain None None unknown None NDRG1, ETV1
Thex_449 unknown unknown brain None None unknown None CASQ2, NTS, EDNRB
Thex_450 unknown unknown brain None None unknown None CASQ2, ADAMTS12, AC092684.1
Thex_451 unknown unknown brain None None unknown None CASQ2, CD226, AC092684.1
Thex_452 unknown unknown brain None None unknown None ITM2A, HPSE2, PVALB
Thex_453 unknown unknown brain None None unknown None CARTPT, RGS16, PNOC
Thex_454 unknown unknown brain None None unknown None TAFA4, AP000331.1
Thex_455 unknown unknown brain None None unknown None LINC01151, FSHR
Thex_456 unknown unknown brain None None unknown None LINC02296, ST8SIA6, BMP6, TCF7L2
Thex_457 unknown unknown brain None None unknown None LINC01036, FAM163A
Thex_458 unknown unknown brain None None unknown None NTS, RGS16, LINC01320
Thex_459 unknown unknown brain None None unknown None SLITRK6, MCUB, RNF220
Thex_460 unknown unknown brain None None unknown None DMRTA1, LINC01239
Tingible Body Macrophage unknown unknown lymph node None None unknown None CD4, CD14, HLA-DRA, ITGAX
Transitional principal-intercalated cell unknown unknown kidney None None unknown None FXYD4, SLC4A9, SLC26A7
ULIT_120 unknown unknown brain None None unknown None GLP2R, LINC01378, TRPC6, SEMA3C
ULIT_121 unknown unknown brain None None unknown None TTC6, LAMP5, ANKRD20A11P, AC011288.2, RP4-809F18.1
ULIT_122 unknown unknown brain None None unknown None LINC01500, LINC00507, PDGFD
ULIT_123 unknown unknown brain None None unknown None LINC02306, LINC02263, PDGFD, RP11-191L9.4
ULIT_124 unknown unknown brain None None unknown None LINC00508, LINC02306, RP11-380P13.1, RP11-335E8.3
ULIT_125 unknown unknown brain None None unknown None LINC02306, LINC01331, CYP1B1-AS1, RP11-335E8.3
ULIT_126 unknown unknown brain None None unknown None RP11-120L14.1, RP11-632B21.2, AJ006998.2
ULIT_127 unknown unknown brain None None unknown None CARM1P1, RP11-120L14.1, AJ006998.2
ULIT_128 unknown unknown brain None None unknown None LAMA2, COL5A2, LINC02055, RP11-387P12.1
ULIT_129 unknown unknown brain None None unknown None LINC00326, LINC02296, CTD-2050E21.1
ULIT_130 unknown unknown brain None None unknown None LINC02296, COL5A2, RP11-370K2.1, RP11-191L9.4
ULIT_131 unknown unknown brain None None unknown None LINC02306, AC067959.1, RP11-191L9.4
ULIT_133 unknown unknown brain None None unknown None RORB, ADAMTS17, POU6F2, TRPC3
ULIT_134 unknown unknown brain None None unknown None VIPR2, RP11-484I6.9, CTB-57H20.1
ULIT_135 unknown unknown brain None None unknown None COL22A1, RP11-197K6.1, CTD-2058B24.2
ULIT_138 unknown unknown brain None None unknown None LINC02306, RP11-404H1.1, RP11-320L2.1
URL_297 unknown unknown brain None None unknown None RBP3
URL_308 unknown unknown brain None None unknown None EOMES, RP11-312A15.5
URL_309 unknown unknown brain None None unknown None ABCA13, RP11-340A13.4
URL_310 unknown unknown brain None None unknown None RELN, RP11-81F8.1, RP11-97F8.2, RP11-649A16.1
URL_311 unknown unknown brain None None unknown None ETV1, RP11-81F8.1, RP11-649A16.1
URL_312 unknown unknown brain None None unknown None TTR, RP11-81F8.1, RP5-1101C3.1
VLMC L1-5 PDGFRA COLEC12 unknown unknown brain None None unknown None COL1A2, COLEC12
VendAC_14 unknown unknown brain None None unknown None SEMA3G, HERC2P3
VendA_18 unknown unknown brain None None unknown None MGP, MECOM
VendC_15 unknown unknown brain None None unknown None HMCN1, ABCG2, MECOM
VendPLVAP_13 unknown unknown brain None None unknown None PLVAP
VendVC_16 unknown unknown brain None None unknown None TRPM6, MECOM
VendV_17 unknown unknown brain None None unknown None IL1R1, SRGN
Ventral Excitatory Neuron 1 unknown unknown spinal cord None None unknown None ZFHX3, POU6F2, ONECUT2
Ventral Excitatory Neuron 2 unknown unknown spinal cord None None unknown None ZFHX3, FOXP2, RNF220
Ventral Excitatory Neuron 3 unknown unknown spinal cord None None unknown None ZFHX3, CDH9, NR4A2
Ventral Inhibitory Neuron 1 unknown unknown spinal cord None None unknown None NFIX, PROX1
Ventral Inhibitory Neuron 2 unknown unknown spinal cord None None unknown None ZFHX3, FOXP2, GATA3
Ventral Inhibitory Neuron 3 unknown unknown spinal cord None None unknown None ZFHX3, ASAH2, GAS1RR
Vsmc_19 unknown unknown brain None None unknown None ACTA2, MECOM
Vsmc_20 unknown unknown brain None None unknown None ACTA2, TAGLN
absorptive unknown unknown large intestine None None unknown None keratin 20, BEST4
absorptive unknown unknown Small Intestine None None unknown None CA2, SI
adipocyte unknown unknown large intestine None None unknown None S100
adult endothelial progenitor cell unknown unknown respiratory system None None unknown None KIT, APLNR
adventitial fibroblast unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, COL6A3, FBLN1, LUM, MFAP5, SCARA5, DCLK1
adventitial fibroblast unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, COL6A3, FBLN1, LUM, MFAP5, PI16, PLA2G2A, SLPI, SCARA5, DCLK1
airway deuterosomal cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, DEUP1, FOXN4, CDC20B, TYMS, FOXJ1
airway deuterosomal cell unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, DEUP1, FOXN4, CDC20B, TYMS, FOXJ1
airway submucosal gland ciliated duct cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, FOXJ1, TUBA1A, DYNLRB2, TUBB4B, RSPH1
airway submucosal gland ciliated duct cells unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, FOXJ1, TUBA1A, DYNLRB2, TUBB4B, RSPH1
airway submucosal gland collecting duct epithelial cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, PLUNC, MIA, ALDH1A3, RARRES1
airway submucosal gland collecting duct epithelial cell unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, BPIFA1, MIA, ALDH1A3, RARRES1
airway submucosal gland collecting duct epithelial cell unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, PLUNC, MIA, ALDH1A3, RARRES1
airway submucosal gland duct basal cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, FOXC1, KRT14, CTNNB1
airway submucosal gland duct basal cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, NGFR, KRT14, CTNNB1
airway submucosal gland duct basal cell unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, FOXC1, KRT14, CTNNB1
airway submucosal gland duct basal cell unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, FOXC1, KRT14, CTNNB1
airway submucosal gland duct ciliated cell unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, FOXJ1, DYNLRB2, RSPH1
alveolar macrophage unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, SIGLEC1, MRC1, CD163, FABP4, MARCO, CYP27A1, PPARG
alveolar macrophage CCL3+ unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, SIGLEC1, MRC1, CD163, CCL3, FABP4, MARCO, CYP27A1, PPARG
alveolar macrophage MT-positive unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, SIGLEC1, MRC1, CD163, MT1E, FABP4, MARCO, CYP27A1, PPARG
alveolar macrophage proliferating unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, SIGLEC1, MRC1, CD163, CDK1, FABP4, MARCO, CYP27A1, PPARG
alveolar type 1 fibroblast cell unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, COL6A3, FBLN1, LUM, WNT2, TCF21, FGFR4
alveolar type 1 fibroblast cell unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, COL6A3, FBLN1, LUM, WNT2, TCF21, FGFR4, INMT, CES1, SAA1, VEGFD
alveolar type I cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, SFTA2, SLC39A8, HOPX, AGER, CLIC5, RTKN2, AQP4, SCEL, GRAMD2A
alveolar type II cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, SFTA2, SLC39A8, HOPX, MFSD2A, ABCA3, SFTPA2, LAMP3, BMP1
apocrine unknown unknown large intestine None None unknown None keratin 7, keratin 19
arteriole endothelial cell unknown unknown large intestine None None unknown None CD31, CD34, CD36
arteriole endothelium unknown unknown large intestine None None unknown None CD31, CD34, CD36
basal cell of bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, NGFR
basal cell of epithelium of lobular bronchiole unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, NGFR
basal cell of epithelium of respiratory bronchiole unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, SCGB3A2, KLK11, SOX4, SCGB1A1
basal cell of epithelium of terminal bronchiole unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, NGFR
basal cell of epithelium of trachea unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, NGFR
basal cell of prostatic urethra unknown unknown prostate gland None None unknown None KRT5, S100A2, KRT15
basal epithelial cell of tracheobronchial tree unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5
basal epithelial cell of tracheobronchial tree unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, NGFR
basophil unknown unknown Blood None None unknown None HDC, CLC, CPA3, IL5RA, GATA2, MS4A3, IL3RA
basophil unknown unknown Bone marrow None None unknown None HDC, CLC, CPA3, IL5RA, GATA2, MS4A3, IL3RA
basophil unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, FCER1G, C1orf162, CLEC7A
blood endothelial cell unknown unknown thoracic thymus None None unknown None A2M, AQP1, BCAM, IFI27, NPDC1, PLVAP, RAMP2, RNASE1, SPARCL1, TM4SF1
blood vessel smooth muscle cell unknown unknown pulmonary vascular system None None unknown None COL1A2, DCN, MFAP4, PLN, NTRK3, NOTCH3, HEY2
blood vessel smooth muscle cell unknown unknown systemic artery None None unknown None COL1A2, DCN, MFAP4, PLN, NTRK3, NOTCH3, HEY2
blood vessel smooth muscle cell unknown unknown venous blood vessel None None unknown None COL1A2, DCN, MFAP4, PLN, NTRK3, NOTCH3, HEY2
blood vessel smooth muscle cell unknown unknown bronchial artery None None unknown None COL1A2, DCN, MFAP4, ACTA2, DES, NOTCH3, HEY2, NTRK3, ITGA7, MYH11
blood vessel smooth muscle cell unknown unknown bronchial vein None None unknown None COL1A2, DCN, MFAP4, ACTA2, DES, NOTCH3, HEY2, NTRK3, ITGA7, MYH11
bronchial smooth muscle cell unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, ACTA2, DES, CNN1, MYH11, PLN, LGR6, FAM83D
bronchial smooth muscle cell unknown unknown extrapulmonary bronchus None None unknown None COL1A2, DCN, MFAP4, ACTA2, DES, CNN1, MYH11, PLN, LGR6, FAM83D
bronchiolar smooth muscle cell unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, ACTA2, DES, CNN1, TAGLN, PLN, LGR6, MYH11
cDC1 CD141-positive myeloid dendritic cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, FCER1G, C1orf162, CLEC7A, CD141, HLA-DRB1, CLEC9A, CADM1, FLT3
cDC2 CD1c-positive myeloid dendritic cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, FCER1G, C1orf162, CLEC7A, CD1c, HLA-DRB1, CLEC10A, FCGR2B, SIRPACD172a
capillary endothelial cell unknown unknown prostate gland None None unknown None GJA1, CA4, PECAM1
capillary endothelium unknown unknown large intestine None None unknown None CD31, CD34, CD36
capsule mesenchymal stromal cell unknown unknown kidney None None unknown None Foxd1, VSX2
ciliated cell of terminal ciliated ducts of submucosal glands unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, FOXJ1, TUBA1A, DYNLRB2, TUBB4B, RSPH1
ciliated cell of the bronchus unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, FOXJ1, RSPH1, DYNLRB2, TUBB4B
ciliated cell of the bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, FOXJ1, RSPH1, DYNLRB2, TUBB4B, DNAH12
ciliated columnar cell of tracheobronchial tree unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, FOXJ1, DYNLRB2, TUBB4B, RSPH1
ciliated epithelial cell unknown unknown Uterus None None unknown None EPCAM, PIFO, TPPP3, FOXJ1
classical inflammatory monocyte unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, FCER1G, C1orf162, CLEC7A, CD14, S100A9, VCAN, CCR2, FCN1
club cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, SCGB1A1, SCGB3A2, CYP2F1
club cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, SCGB1A1, SCGB3A2, CYP2F2
columnar unknown unknown large intestine None None unknown None keratin 7
common lymphoid progenitor unknown unknown Bone marrow None None unknown None CYGB, ADA, PRDX1, LAT2, UMODL1, CD200
common myeloid progenitor unknown unknown Bone marrow None None unknown None HPGDS, GATA2, CYTL1, SERPINB1, MEST
connective tissue type mast cell unknown unknown respiratory system None None unknown None MS4A2, SLC18A2, RGS13, TPSAB1, CPA3, KIT, CMA1
conventional dendritic cell 1 unknown unknown thoracic thymus None None unknown None BATF3, C1orf54, CLEC9A, CPVL, DNASE1L3, HLA-DPA1, IRF8, LGALS2, LYZ, RGCC
conventional dendritic cell 2 unknown unknown thoracic thymus None None unknown None ALDH2, CD1C, CLEC10A, CTSH, GSN, HLA-DQA1, HAL-DQB1, JAML, LGALS2, MNDA
cortical thymic epithelial cell unknown unknown thoracic thymus None None unknown None CCL25, COX7A1, CTSV, GNG11, PDLIM1, PLTP, PRSS16, PSMB11, S100A14, SCX
corticomedullary thymic epithelial cell unknown unknown thoracic thymus None None unknown None CCL2, CCL25, CTSV, CYR61, HCFC1R1, KRT5, P3H2, PLTP, TDGF1, TFPI2
cytotoxic CD4 T cell unknown unknown thoracic thymus None None unknown None ARID5B, CKLF, CST7, DUSP4, GZMA, GZMK, IL10, PRDM1, RGS1, RNF19A
dendritic cell unknown unknown large intestine None None unknown None HLA-DR, CD11c, CD123
dendritic cell unknown unknown large intestine None None unknown None integrin subunit alpha E/CD103, integrin subunit alpha M/CD11b
dendritic cell type 1 unknown unknown Bone marrow None None unknown None CLEC9A, CADM1, XCR1
dendritic cell type 1 (DC1) unknown unknown Blood None None unknown None CLEC9A, CADM1, XCR1
dendritic cell type 2 unknown unknown Bone marrow None None unknown None CD1C, FCER1A, CLEC10A, HLA-DQA2, HLA-DPB1, FCGR2B
dendritic cell type 2 (DC2) unknown unknown Blood None None unknown None CD1C, FCER1A, CLEC10A, HLA-DQA2, HLA-DPB1, FCGR2B
dendritic cell type 3 unknown unknown Bone marrow None None unknown None CD1C, FCER1A, CLEC10A, S100A8, S100A9, CD36, CD163
dendritic cell type 3 (DC3) unknown unknown Blood None None unknown None CD1C, FCER1A, CLEC10A, S100A8, S100A9, CD36, CD163
double negative thymocyte 2 unknown unknown thoracic thymus None None unknown None BCL11B, CD3E, CD7, CD34, CD44, GATA3, MME, PTCRA, SPI1, TCF7
double negative thymocyte 3 unknown unknown thoracic thymus None None unknown None BCL11B, CD3E, CD7, CD34, GATA3, MME, PTCRA, RAG2, TCF7
double negative thymocyte 4 unknown unknown thoracic thymus None None unknown None BCL11B, CD1A, CD3E, CD7, DNTT, GATA3, MME, PTCRA, RAG2, TCF7
double positive thymocyte unknown unknown thoracic thymus None None unknown None CD1A, CD1B, CD1E, CD8A, CD8B, ELOVL4, SH3TC1, SMPD3, UHRF1
early Megakaryocyte unknown unknown Bone marrow None None unknown None GATA2, FCER1A, PLEK, CAVIN2, PDLIM1
early erythroid unknown unknown Bone marrow None None unknown None MYC, APOC1, PRSS57, KCNH2, EPCAM, CD36, KLF1, GATA1
early thymic progenitor unknown unknown thoracic thymus None None unknown None BCL11B, CD7, CD19, CD34, CD44, CD79B, GATA3, IRF8, MPO, SPI1
eccrine unknown unknown large intestine None None unknown None keratin 7, keratin 19
effector memory CD4-positive, alpha-beta T cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, CD3E, IL7R, CD3E, CD4
effector memory CD8-positive, alpha-beta T cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, CD3E, CD8A, CD3e, CD3D
endocrine lineage cell unknown unknown Small Intestine None None unknown None CRYBA2
endothelial cell unknown unknown Uterus None None unknown None CD34, SEMA3G, ACKR1
endothelial cell of artery unknown unknown systemic artery None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR, DKK2, GJA5, EFNB2, HEY1, SOX17
endothelial cell of artery unknown unknown bronchial artery None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR, EFNB2, GJA5, IGFBP3, BMX, DKK2
endothelial cell of artery unknown unknown prostate gland None None unknown None GJA4, IGFBP3, PECAM1
endothelial cell of respiratory system lymphatic vessel unknown unknown respiratory system None None unknown None CLDN5, ECSCR, MMRN1, PROX1, CCL21, LYVE1
endothelial cells unknown unknown Small Intestine None None unknown None NOVA2, SOX17
endovascular extravillous trophoblast unknown unknown placenta None None unknown None HLA-G, KRT7, MCAM, CDH5
enterocyte unknown unknown Small Intestine None None unknown None BEST4, CA7, NEURL1, HES1
eosinophil unknown unknown Blood None None unknown None HDC, CLC, CPA3, IL5RA, GATA2, MS4A3, HPGDS
eosinophil unknown unknown Bone marrow None None unknown None HDC, CLC, CPA3, IL5RA, GATA2, MS4A3, HPGDS
eosinophil unknown unknown large intestine None None unknown None CD11b, CD294
epithelial stem cell unknown unknown large intestine None None unknown None RGMB, SOX9, CD44, Lgr5, LRIG1, SMOC2
erythroid unknown unknown thoracic thymus None None unknown None AHSP, ALAS2, BLVRB, FAM178B, HBA1, HBA2, HBB, HBG1, HBG2, HBM
fibroblast unknown unknown large intestine None None unknown None Col6A1, Col6A2
fibroblast unknown unknown Small Intestine None None unknown None COL6A1, COL6A2
fibroblast of pulmonary artery unknown unknown pulmonary vascular system None None unknown None COL1A2, MMP2
fibroblasts unknown unknown Small Intestine None None unknown None COL6A1, COL6A2
gamma-delta T cell unknown unknown thoracic thymus None None unknown None AES, ANXA1, CCR9, FCGRT, LAT, SELL, SH3BP5, SMPD3, TESPA1, TRDC
ganglion unknown unknown large intestine None None unknown None peripherin, MAP-2
glandular epithelial cell unknown unknown Uterus None None unknown None EPCAM, SCGB2A2, PAEP, CXCL8
glomus cell unknown unknown large intestine None None unknown None actin alpha 2, smooth muscle, dopamine receptor D2
goblet unknown unknown large intestine None None unknown None keratin 20, MUC2
goblet cell unknown unknown Small Intestine None None unknown None MUC2, ITLN1, SLC26A2, CLCA4
goblet cell of epithelium of lobar bronchus unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, MUC5AC, SPDEF, MUC5B, TFF2, AGR2
goblet cell of epithelium of lobar bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, MUC5AC, SPDEF, MUC5B, TFF2, AGR2
granulocyte-macrophage progenitor cell unknown unknown Bone marrow None None unknown None CD34, CALR, CLEC11A, MPO, AZU1
group 3 innate lymphoid cell unknown unknown thoracic thymus None None unknown None CD52, IL7R, JAML, KLRB1, KRT86, LST1, LTB, S100A4, TMIGD2, TRDC
hemopoietic stem cell unknown unknown Bone marrow None None unknown None AVP, CRHBP, NPR3, BEX1, PROM1, CD34, HLF, MLLT3
immature B cell unknown unknown Blood None None unknown None CD19, PAX5, IGHM, MS4A1
immature B cell unknown unknown Bone marrow None None unknown None CD19, PAX5, IGHM, MS4A1
immature NKT cell unknown unknown thoracic thymus None None unknown None CCL5, CD8A, CST7, GIMAP4, GZMK, GZMM, NKG7, SAMD3, XCL1
innate lymphoid cell unknown unknown large intestine None None unknown None CD127, CD117, CD161
innate lymphoid cell unknown unknown Uterus None None unknown None CD69, KIT, IL7R, CXCR4, CCL5, SPINK2
interstitial cell of Cajal unknown unknown large intestine None None unknown None CD117, CD34
interstitial extravillous trophoblast unknown unknown placenta None None unknown None HLA-G, KRT7, MCAM, PLAC8
ionocyte epithelia unknown unknown prostate gland None None unknown None FOXI1, ATP6V0A4, DGKI
keratinocyte unknown unknown large intestine None None unknown None keratin 5/6, p60
langerhans unknown unknown large intestine None None unknown None CD1a, langerin
langerhans cells unknown unknown large intestine None None unknown None CD1a, langerin
late erythroid unknown unknown Bone marrow None None unknown None HBB, ALAS2, BPGM, HBA2, HBG1, DCAF12, ADIPOR1
luminal epithelial cell unknown unknown Uterus None None unknown None EPCAM, LGR5, PTGS1
lung ciliated cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, FOXJ1, RSPH1, DYNLRB2, TUBB4B
lung megakaryocyte unknown unknown respiratory system None None unknown None ITGA2B, ITGB3, PF4, GP1BA
lung neuroendocrine cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, ASCL1, GRP, CHGA, CALCA
lung neuroendocrine cell unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, ASCL1, GRP, CALCA, CHGA
lung parenchyma resident eosinophil unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, EPX, EAR11
lung perichondrial fibroblast unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, COL6A3, FBLN1, LUM, COL2A1
lung perichondrial fibroblast unknown unknown extrapulmonary bronchus None None unknown None COL1A2, DCN, MFAP4, COL6A3, FBLN1, COL2A1, LUM
lung pericyte unknown unknown respiratory system None None unknown None COL1A2, DCN, LAMC3, HIGD1B, COX4I2, TRPC6, PDGFRB
lymph node lymphatic vessel endothelial cell unknown unknown prostate gland None None unknown None LYVE1, FLT4, PECAM1
lymphatic endothelial cell unknown unknown lymph vasculature None None unknown None FLT4 (VEGFR-3)
lymphatic endothelial cell unknown unknown thoracic thymus None None unknown None CCL21, FABP5, LAPTM5, MMRN1, NTS, NUPR1, PROX1, SDPR, TFF3, TFPI
lymphatic endothelium unknown unknown large intestine None None unknown None CD31, podoplanin
lymphatic endothelium unknown unknown large intestine None None unknown None PDL1, CD56, PGP9.5
lympho-myeloid progenitor cell unknown unknown Bone marrow None None unknown None CD34, BCL11A, IL2RG, JCHAIN, SOX4, SYK
lymphocyte unknown unknown Uterus None None unknown None PTPRC, NCAM1
macrophage unknown unknown large intestine None None unknown None HLA-DR, CD163, CD206, CD11b, CD68
macrophage unknown unknown large intestine None None unknown None CD3, CD4
macrophage unknown unknown Small Intestine None None unknown None CD14
macrophage unknown unknown thoracic thymus None None unknown None APOE, C1QA, C1QB, C1QC, LGMN, MS4A7, RNASE1, SELENOP, SLC40A1, STAB1
macrophage unknown unknown Uterus None None unknown None CD68, CD14, CSF1R, IL1B, SEPP1
mast cell unknown unknown Bone marrow None None unknown None HDC, CLC, CPA3, IL5RA, GATA2, MS4A3, HPGDS, TPSAB1, KIT
mast cell unknown unknown large intestine None None unknown None CD117, MCT
mast cell unknown unknown Small Intestine None None unknown None HDC
mast cell unknown unknown thoracic thymus None None unknown None CPA3, GATA2, HDC, HPGDS, IL1RL1, LMO4, PLIN2, TNFSF10, TPSAB1, TPSB2
mast cell unknown unknown Uterus None None unknown None CD69, MS4A2, KIT, CSF1
mature CD8 T cell unknown unknown Blood None None unknown None CCL5, GZMH, IL32, CD8A, DUSP2, KLRG1, TRGC2, GZMK
mature CD8 T cell unknown unknown Bone marrow None None unknown None CCL5, GZMH, IL32, CD8A, DUSP2, KLRG1, TRGC2, GZMK
mature NK T cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, CD3E, IL7R, NCAM1, CD3E
mature Natural killer unknown unknown Blood None None unknown None TRDC, KLRB1, CLIC3, CST7, GZMA, GZMB, PRF1, FCGR3A
mature Natural killer unknown unknown Bone marrow None None unknown None TRDC, KLRB1, CLIC3, CST7, GZMA, GZMB, PRF1, FCGR3A
medullary thymic epithelial cell type 1 unknown unknown thoracic thymus None None unknown None CCL19, CH25H, CLU, FN1, KRT5, KRT14, KRT15, KRT19, PTGDS, SAA1
medullary thymic epithelial cell type 2 unknown unknown thoracic thymus None None unknown None CALML3, CCL19, CSTA, FGF17, HLA-DQA1, KRT17, NTHL1, SNCG, TYW3, VIM
medullary thymic epithelial cell type 3 unknown unknown thoracic thymus None None unknown None CALML5, DEFB1, KRT6A, KRT19, LYD, PERP, S100A9, SFN, SLP1, SPINK5
medullary thymic epithelial cell type 4 unknown unknown thoracic thymus None None unknown None ANXA1, ANXA4, BMX, EPCAM, FOXI1, HEPACAM2, KRT8, KRT18, LRMP, RASSF6
megakaryocyte-erythroid-mast cell progenitor unknown unknown Bone marrow None None unknown None CD34, SPINK2, PRSS57, GATA2, TESPA1, IL1B, CTNNBL1, GATA1
melanocyte unknown unknown large intestine None None unknown None S100, melanA, SOX10
memory B cell unknown unknown Blood None None unknown None CD19, MS4A1, IGHA1, IGHG1, CD82, SELL, CD27
memory B cell unknown unknown Bone marrow None None unknown None CD19, MS4A1, IGHA1, IGHG1, CD82, SELL, CD27
memory B cell unknown unknown thoracic thymus None None unknown None ADAM28, BANK1, CRIP1, GPR183, HLA-DQA1, HLA-DRA, IGHA1, LY86, MS4A1, TNFRSF13B
mesothelial cell unknown unknown large intestine None None unknown None keratin 8, keratin 18, calretinin
mesothelial cell of visceral pleura unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, WT1, UPK3B, ITLN1
mid erythroid unknown unknown Bone marrow None None unknown None CD36, KLF1, TSPO2, RHAG, RHCE, SPTA1
migratory dendritic cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, FCER1G, C1orf162, CLEC7A, CCR7, CCL19, LAD1
monocyte unknown unknown thoracic thymus None None unknown None CD52, CTSS, FCN1, LYZ, S100A4, S100A6, S100A8, S100A9, S100A12, VCAN
motor neuron unknown unknown spinal cord None None unknown None SNAP25, PRPH
mucosal invariant T cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, CD3E, IL7R, KLRB1, PRF1, KLRG1
mucus secreting cell of bronchus submucosal gland unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, MUC5B, SPDEF, AGR2
mucus secreting cell of bronchus submucosal gland unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, MUC5B, SPDEF, AGR2
mucus secreting cell of trachea gland unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, MUC5B, SPDEF, AGR2
multipotent progenitor cell unknown unknown Bone marrow None None unknown None CD34, SPINK2, FLT3
muscle unknown unknown large intestine None None unknown None aSMA, smoothelin
myelocyte unknown unknown Bone marrow None None unknown None LCN2, CAMP, LTF, STOM, CEACAM8
myo-medullary thymic epithelial cell unknown unknown thoracic thymus None None unknown None ACTA1, KLHL41, MYLPF, MYOG, NEB, NNAT, TNNI2, TNNT3, TPM2, TTN
myoepithelial unknown unknown large intestine None None unknown None aSMA
myoepithelial cell of bronchus submucosal gland unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, ACTA2, MYH11, KRT14, KRT5, CNN1
myoepithelial cell of bronchus submucosal gland unknown unknown respiratory system None None unknown None CDH1, FXYD3, EPCAM, ELF3, ACTA2, MYH11, KRT14, KRT5, CNN1
myoepithelial cell of bronchus submucosal gland unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, ACTA2, MYH11, KRT14, KRT5, CNN1
myoepithelial cell of trachea gland unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, ACTA2, MYH11, KRT14, KRT5, CNN1
myofibroblast unknown unknown large intestine None None unknown None aSMA
myofibroblast unknown unknown Small Intestine None None unknown None TP53I3, DES, ACTG2, CNN1
naive B cell unknown unknown Blood None None unknown None CD19, PAX5, IGHM, MS4A1, CD40, FCER2
naive B cell unknown unknown Bone marrow None None unknown None CD19, PAX5, IGHM, MS4A1, CD40, FCER2
naive B cell unknown unknown thoracic thymus None None unknown None BIRC3, CD22, CD79A, FCER2, HLA-DQB1, HLA-DRA, IGHD, IGHM, MS4A1, TCL1A
naive thymus-derived CD4-positive, alpha-beta T cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, CD3E, IL7R, CCR7, LEF1
naive thymus-derived CD8-positive, alpha-beta T cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, CD3E, IL7R, CD8B, CCR7, MYC, GMNN
natural killer cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, NKG7, KLRD1, TBX21, EOMES, NKp46
natural killer cell unknown unknown thoracic thymus None None unknown None CMC1, GNLY, HOPX, KLRB1, KLRC1, KLRD1, KLRF1, NKG7, TYROBP, XCL2
nerve unknown unknown large intestine None None unknown None PDL1, CD56, PGP9.5
nerve unknown unknown large intestine None None unknown None S100, SOX10, PGP9.5
nerve/schwann cell unknown unknown large intestine None None unknown None S100, CD56, PGP9.5
neuro-medullary thymic epithelial cell unknown unknown thoracic thymus None None unknown None BEX1, CAMK2B, CIB2, CLDN3, HES6, KIF19, MAP1B, NNAT
neuroendocrine unknown unknown large intestine None None unknown None chromogranin A, synaptophysin, INSM1, INSL5
neuroendocrine cell unknown unknown large intestine None None unknown None chromogranin A, synaptophysin, INSM1
neuroendocrine cell of epithelium of lobar bronchus unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, ASCL1, GRP, CHGA, CALCA
neuroendocrine cell of epithelium of lobar bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, ASCL1, GRP, CHGA, CALCA
neutrophil unknown unknown Blood None None unknown None ITGAM, MMP9, PGLYRP1, ORM1, S100A12, FCN1
neutrophil unknown unknown Bone marrow None None unknown None ITGAM, MMP9, PGLYRP1, ORM1, S100A12, FCN1
neutrophil unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, FCER1G, C1orf162, CLEC7A, CSF3R, FCGR3B
neutrophil (normally intravascular only) unknown unknown large intestine None None unknown None CD15, CD16
non-classical or patrolling monocyte unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, FCER1G, C1orf162, CLEC7A, MS4A7, CSF1R, RGS18
perichondrial fibroblast unknown unknown trachea None None unknown None COL1A2, DCN, MFAP4, COL6A3, FBLN1, LGR4, LGR6, FLNB, FGFR2
pericryptal fibroblastic sheath unknown unknown large intestine None None unknown None aSMA, WNT2B, RSPO3
pericryptal fibroblastic sheath unknown unknown large intestine None None unknown None aSMA
pericyte unknown unknown large intestine None None unknown None PDGFRB
pericyte unknown unknown large intestine None None unknown None CD31
perineurial cell unknown unknown large intestine None None unknown None CD34
perivascular smooth muscle cell unknown unknown large intestine None None unknown None aSMA
perivascular support cell unknown unknown Uterus None None unknown None ACTA2, MYH11
plasma unknown unknown Small Intestine None None unknown None IGLL5
plasma cell unknown unknown Bone marrow None None unknown None SDC1, DERL3, MZB1, IGKC, SEC11C, IGHG1, IGHA1, TNFRSF17
plasma cell unknown unknown large intestine None None unknown None CD138
plasma cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, MS4A1, BANK1, DERL3, MZB1, SDC1, CD38
plasma cell unknown unknown thoracic thymus None None unknown None DERL3, FKBP11, IGHG1, IGHG3, IGKC, JCHAIN, MZB1, SEC11C, SSR4, XBP1
plasmacytoid dendritic cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, FCER1G, C1orf162, CLEC7A, IL3RA, HLA-DRB1, CLEC4C, NRP1, CXCR3
plasmacytoid dendritic cell unknown unknown thoracic thymus None None unknown None CCDC50, GZMB, IL3RA, IRF7, IRF8, JCHAIN, LILRA4, PLAC8, PLD4, UGCG
precursor B cell unknown unknown Bone marrow None None unknown None CD19, PAX5, IGHM, IGHD
pro B progenitor unknown unknown Bone marrow None None unknown None DNTT, MME, VPREB1, RAG1
promonocyte unknown unknown Bone marrow None None unknown None CX3CR1, CCR2, HLA-DRA, S100A4, S100A6, CST3
promyelocyte unknown unknown Bone marrow None None unknown None MPO, ELANE, CTSG, PRTN3, AZU1
pulmonary artery endothelial cell unknown unknown pulmonary vascular system None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR
pulmonary ionocyte unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, ASCL3, FOXI1, BSND, CLCNKB
pulmonary ionocyte unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, ASCL3, FOXI1, BSND, CLCNKB
regulatory CD4+ T cell unknown unknown large intestine None None unknown None CD4, FOXP3, CD25
regulatory T cell unknown unknown respiratory system None None unknown None CD53, PTPRC, CORO1A, CD3E, IL7R, FOXP3, CTLA4, TNFRSF4, RTKN2, FANK1
regulatory T cells unknown unknown thoracic thymus None None unknown None BATF, CARD16, CTLA4, FOXP3, GBP2, IL32, PIM2, PMAIP1, S100A4, TIGIT
respiratory suprabasal cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, NGFR, KRT19, NOTCH3, KRT4
respiratory suprabasal cell unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, TP63, KRT5, NGFR, KRT19, NOTCH3
schwann cell unknown unknown large intestine None None unknown None S100 calcium binding protein A2
sebocyte unknown unknown large intestine None None unknown None keratin 7
secondary crest myofibroblast unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, LTBP2, PDGFRA, ACTA2, C1QTNF7, MYH11
serous cell of epithelium of bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, PIGR, LYZ, LPO, LTF
serous cell of epithelium of trachea unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, LYZ, PRR4, LPO, LTF
serous secreting cell of bronchus submucosal gland unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, PIGR, LYZ, LPO, LTF
skeletal muscle unknown unknown large intestine None None unknown None DES
smooth muscle unknown unknown large intestine None None unknown None aSMA
smooth muscle cell of the pulmonary artery unknown unknown pulmonary vascular system None None unknown None COL1A2, DCN, MFAP4, PLN, NTRK3, NOTCH3, HEY2
squamous unknown unknown large intestine None None unknown None keratin 5/6, p60
stem cell unknown unknown Small Intestine None None unknown None LGR5, ASCL2, OLFM4, RNF43
stromal cell unknown unknown Uterus None None unknown None IGF1, PCOLCE, MMP11, OGN
subepithelial membrane unknown unknown large intestine None None unknown None aSMA
surface intraepithelial CD4+ lymphocyte unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD3-TCR, CD4
surface intraepithelial CD4-CD8- lymphocyte alpha/beta unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD3-TCR
surface intraepithelial CD8+ alph alpha positive alpha/beta lymphocyte unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD3-TCR, CD8
surface intraepithelial CD8+ alph beta positive alpha/beta lymphocyte unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD3-TCR, CD8
surface intraepithelial CD8+ alpha alpha positive alpha/beta lymphocyte unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD3-TCR, CD8
surface intraepithelial CD8+ alpha beta positive alpha/beta lymphocyte unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD3-TCR, CD8
surface intraepithelial CD8+ lymphocyte gamma/delta unknown unknown large intestine None None unknown None CD3, CD7, CD2, CD5, CD3-TCR, CD8
sympathetic neuron unknown unknown respiratory system None None unknown None TUBB3
thymic capsular fibroblast unknown unknown thoracic thymus None None unknown None C7, DPT, HSPB6, MFAP4, PTGDS, PTN, RBP5, RSPO3, SPARCL1, SRPX
thymic interlobular fibroblast unknown unknown thoracic thymus None None unknown None COL1A1, COL1A2, COL3A1, COL14A1, FBN1, FN1, IGFBP6, LUM, MGP, OGN
tissue resident mucosal type mast cell unknown unknown respiratory system None None unknown None MS4A2, SLC18A2, RGS13, TPSAB1, TPSB2, KIT
tracheal goblet cell unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, MUC5AC, SPDEF, MUC5B, TFF2
tracheobronchial chondrocyte unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, COL2A1
tracheobronchial chondrocyte unknown unknown extrapulmonary bronchus None None unknown None COL1A2, DCN, MFAP4, COL2A1
tracheobronchial chondrocyte unknown unknown trachea None None unknown None COL1A2, DCN, MFAP4, COL2A1
tracheobronchial goblet cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, MUC5AC, SPDEF, MUC5B, TFF2, AGR2
tracheobronchial smooth muscle unknown unknown respiratory system None None unknown None COL1A2, DCN, MFAP4, ACTA2, DES, CNN1, MYH11, PLN, LGR6, FAM83D
tracheobronchial smooth muscle cell unknown unknown trachea None None unknown None COL1A2, DCN, MFAP4, ACTA2, DES, CNN1, MYH11, PLN, LGR6, FAM83D
transient amplifying cell unknown unknown large intestine None None unknown None keratin 20
transitional unknown unknown large intestine None None unknown None keratin 7, keratin 19
transitional B cell unknown unknown Blood None None unknown None IGLL5, SOX4, BCL7A, TCL1A, FCRLA, CD24
transitional B cell unknown unknown Bone marrow None None unknown None IGLL5, SOX4, BCL7A, TCL1A, FCRLA, CD24
transitional Dendritic Cell unknown unknown Bone marrow None None unknown None AXL, SIGLEC6, CD22
transitional Dendritic Cell (tDC) unknown unknown Blood None None unknown None AXL, SIGLEC6, CD22
tuft cell unknown unknown large intestine None None unknown None keratin 20, DCLK1, TRPM5, POU2F3, PTGS1
tuft cell unknown unknown respiratory system None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, POU2F3, ASCL2, TRPM5, DCLK1
tuft cell unknown unknown extrapulmonary bronchus None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, POU2F3, ASCL2, TRPM5, DCLK1
tuft cell unknown unknown Small Intestine None None unknown None DCLK1, IRF7, SELENBP1
tuft cell unknown unknown trachea None None unknown None CDH1, EPCAM, ELF3, FXYD3, TSPAN1, POU2F3, ASCL2, TRPM5, DCLK1
uterine dendritic cells unknown unknown Uterus None None unknown None IL1B, CD68
uterine macrophage unknown unknown placenta None None unknown None CD68, ITGAX, CD209, MRC1
uterine natural killer cell unknown unknown Uterus None None unknown None CD69, HMGB2, NCAM1, CCL5
uterine smooth muscle type II cell unknown unknown Uterus None None unknown None ACTA2, MYH11, ACTG2
vein endothelial cell unknown unknown prostate gland None None unknown None SELP, CSF3, PECAM1
vein endothelial cell of respiratory system unknown unknown respiratory system None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR, ACKR1, PDZRN4, NRF2
vein endothelial cell of respiratory system unknown unknown pulmonary vascular system None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR, MMRN1
vein endothelial cell of respiratory system unknown unknown venous blood vessel None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR, ACKR1, PLVAP
vein endothelial cell of respiratory system unknown unknown bronchial vein None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR, EPHB4, NR2F2, ACKR1
vein endothelial cell of respiratory system unknown unknown bronchial vein None None unknown None CLDN5, NOTCH4, CLEC14A, ECSCR, EFNB4, Nr2F2, ACKR1
venous endothelium unknown unknown large intestine None None unknown None CD31, CD34, CD36
venule endothelium unknown unknown large intestine None None unknown None CD31, CD34, CD36

|}

List of databases relevant to this list edit

Name Provider Sources of revenue/sponsors
HubMap[18] A series of US based universities Unknown

See also edit

References edit

  1. ^ Hatton IA, Galbraith ED, Merleau NS, Miettinen TP, Smith BM, Shander JA (September 2023). "The human cell count and size distribution". Proceedings of the National Academy of Sciences of the United States of America. 120 (39): e2303077120. doi:10.1073/pnas.2303077120. PMC 10523466. PMID 37722043.
  2. ^ a b "Mapping the human body one cell at a time: New study reveals the intricate relationship between cell size and count". News-Medical.net. 2023-09-19. Retrieved 2023-10-18.
  3. ^ Society, Max Planck. "Cellular cartography: Charting the sizes and abundance of our body's cells reveals mathematical order underlying life". medicalxpress.com. Retrieved 2023-10-18.
  4. ^ a b Sender R, Fuchs S, Milo R (August 2016). "Revised Estimates for the Number of Human and Bacteria Cells in the Body". PLOS Biology. 14 (8): e1002533. doi:10.1371/journal.pbio.1002533. PMC 4991899. PMID 27541692.
  5. ^ Hewings-Martin Y (12 July 2017). "How many cells are in the human body?". Medical News Today. Retrieved 28 June 2023.
  6. ^ Zimmer C (23 October 2013). . National Geographic. Archived from the original on April 3, 2021. Retrieved 29 June 2023.
  7. ^ Hatton, Ian A.; Galbraith, Eric D.; Merleau, Nono S. C.; Miettinen, Teemu P.; Smith, Benjamin McDonald; Shander, Jeffery A. (2023-09-26). "The human cell count and size distribution". Proceedings of the National Academy of Sciences. 120 (39). doi:10.1073/pnas.2303077120. ISSN 0027-8424. PMC 10523466. PMID 37722043.
  8. ^ "Home". humancellatlas.org. Retrieved 5 May 2023.
  9. ^ "NIH to build a detailed map of cells within the human body". National Institutes of Health (NIH). 26 September 2018. Retrieved 5 May 2023.
  10. ^ Davis D. "The ambitious quest to map every cell in our body". BBC. Retrieved 5 May 2023.
  11. ^ "The HuBMAP Human BioMolecular Atlas Program". HuBMAP Consortium. Retrieved 5 May 2023.
  12. ^ "The Human Protein Atlas". www.proteinatlas.org. Retrieved 19 July 2023.
  13. ^ "Siibra Explorer". atlases.ebrains.eu. Retrieved 2023-07-02.
  14. ^ "Medical Data Analytics". The Human Brain Project. Retrieved 2 July 2023.
  15. ^ Gilbert SF (2000). "Endoderm". Developmental Biology (6th ed.). Sunderland (MA): Sinauer Associates. Retrieved 2023-07-02.
  16. ^ "Brunner Gland - an overview | ScienceDirect Topics". www.sciencedirect.com. Retrieved 2023-12-10.
  17. ^ "CCF ASCT+B Reporter". Hubmap Consortium.
  18. ^ "The Human BioMolecular Atlas Program (HuBMAP)". commonfund.nih.gov. 5 January 2017. Retrieved 2023-07-12.

External links edit

 
Wikimedia Commons has media related to Human cells.
  • Human Cell Tree Map
  • Human Cell Atlas

April 12, 2024
list, distinct, cell, types, adult, human, body, also, cell, type, there, about, trillion, 1013, human, cells, adult, human, body, varying, from, about, trillion, depending, weight, roughly, equal, number, bacterial, cells, human, cells, have, been, categorize. See also Cell type There are about 30 trillion 3 1013 human cells in the adult human body varying from about 20 to 40 trillion depending on the sex age and weight and a roughly equal number of bacterial cells 1 2 3 4 5 6 The human cells have been categorized into over 400 cell types 2 based on location and function within the body of which about 230 types are listed here A family tree including all the known human cells However not all cells are linked to their precursor or progenitor yet The main cellular components of the human body by count 4 Cell type cell countErythrocytes red blood cells 84 0Platelets 4 9Bone marrow cells 2 5Vascular endothelial cells 2 1Lymphocytes 1 5Hepatocytes 0 8Neurons and glia 0 6Bronchial endothelial cells 0 5Epidermal cells 0 5Respiratory interstitial cells 0 5Adipocytes fat cells 0 2Dermal fibroblasts 0 1Muscle cells 0 001Other cells 2 0The above dataset provides a nested list of cell groups with over 400 human cell types with cell count cell size and aggregate cell mass biomass See Dataset S1 Cell Group by Subgroup Tab in this reference 7 There are many different types of cells in the human body Contents 1 Major efforts to map all human cells 2 Complete lists of human cells known so far 2 1 Cells derived primarily from endoderm 2 2 Cells derived primarily from ectoderm 2 2 1 Nervous system 2 2 2 Central nervous system neurons and glial cells 2 3 Cells derived primarily from mesoderm 3 List of databases relevant to this list 4 See also 5 References 6 External linksMajor efforts to map all human cells editSeveral efforts have been made to make a list or a map of all human cells 8 9 10 One of the largest and most recent is the HuBMAP Human BioMolecular Atlas Program 11 They managed to organize 1551 samples across 17 collections However this project still only mapped about 31 of the human bodies 70 organs Their datasets and visualisations place great emphasis on biomarkers and location in the body but less on cell development and how cells can change over time Usually specific surface proteins are used to identify cells and based on this they are put into different categories Another major effort to make an overview of these proteins that allows us to observe cell types is the Swedish Protein Atlas 12 The Human Brain Project has attempted to map the human brain 13 14 although much of the publicly accessible model does not have cellular resolution Complete lists of human cells known so far editThis section needs expansion You can help by adding to it January 2015 Cells derived primarily from endoderm edit The endodermal cells primarily generate the lining and glands of the digestive tube 15 Cells derived primarily from ectoderm edit Nervous system edit There are nerve cells also known as neurons present in our human body They are branched out These cells make up nervous tissue A neuron consists of a cell body with a nucleus and cytoplasm from which long thin hair like parts arise Central nervous system neurons and glial cells edit See also glial cell large variety of types still poorly classified Cells derived primarily from mesoderm edit Note Cephalic connective tissue and bones are derived from the cranial neural crest which comes from the ectoderm germ layer Name Progenitor precursor cell Predecessor Cells Location in Body Function Cell type Cell subtype Originally derived from Known biomarkersBrunner s gland cell crypt basal stem cells Zymogen cell Goblet cell Entero endocrine Enterocyte in duodenum duodenal submucosa 16 enzyme and alkaline mucus secretion Exocrine secretory epithelial cells EndodermInsulated goblet cell Respiratory and digestive tracts mucus secretionFoveolar cell StomachChief cell pepsinogen secretionParietal cell hydrochloric acid secretionPancreatic acinar cell Pancreas confirmation needed bicarbonate and digestive enzyme secretionPaneth cell small intestine lysozyme secretionType II pneumocyte Lungs surfactant secretionClub cellType I pneumocyte formation of the Blood Gas Barrier Barrier cellGall bladder epithelial cell Gall bladderCentroacinar cell Pancreas salivary glands Intestinal brush border cell with microvilli K cell gastric inhibitory peptide secretion Hormone secreting cells Enteroendocrine cellL cell glucagon like peptide 1 peptide YY3 36 oxyntomodulin and glucagon like peptide 2 secretionI cell cholecystokinin CCK secretionG cell gastrin secretionEnterochromaffin cell serotonin secretionEnterochromaffin like cell histamine secretionN cell neurotensin secretionS cell secretin secretionD cell somatostatin secretionMo cell or M cell motilin secretionother hormones secreted vasoactive intestinal peptide substance P alpha and gamma endorphin bombesinThyroid epithelial cell Thyroid gland cellsParafollicular cellParathyroid chief cell Parathyroid gland cellsOxyphil cellAlpha cell glucagon secretion Pancreatic islets islets of Langerhans Beta cell insulin and amylin secretionDelta cell somatostatin secretionEpsilon cell ghrelin secretionPP cell gamma cell pancreatic polypeptide secretionSalivary gland mucous cell Exocrine secretory epithelial cells EctodermSalivary gland serous cellVon Ebner s gland cell in tongue washes taste buds Mammary gland cell milk secretion Lacrimal gland cell tear secretion Ceruminous gland cell in ear earwax secretion Eccrine sweat gland dark cell glycoprotein secretion Eccrine sweat gland clear cell small molecule secretion Apocrine sweat gland cell odoriferous secretion sex hormone sensitive Gland of Moll cell in eyelid specialized sweat gland Sebaceous gland cell lipid rich sebum secretion Bowman s gland cell in nose washes olfactory epithelium Corticotropes Hormone secreting cells Anterior Intermediate pituitary cellsGonadotropes Anterior Intermediate pituitary cellsLactotropes Anterior Intermediate pituitary cellsMelanotropes Anterior Intermediate pituitary cellsSomatotropes Anterior Intermediate pituitary cellsThyrotropes Anterior Intermediate pituitary cellsMagnocellular neurosecretory cells secrete oxytocin and vasopressinParvocellular neurosecretory cells secrete thyrotropin releasing hormone TRH corticotropin releasing hormone CRH vasopressin oxytocin neurotensin and prolactinChromaffin cells adrenal gland Keratinocyte differentiating epidermal cell Epithelial cellsEpidermal basal cell stem cell MelanocyteTrichocyte gives rise to hair and nail cells Medullary hair shaft cell TrichocyteCortical hair shaft cell TrichocyteCuticular hair shaft cell TrichocyteHuxley s layer hair root sheath cell TrichocyteHenle s layer hair root sheath cell TrichocyteOuter root sheath hair cell TrichocyteSurface epithelial cell cornea tongue mouth nasal cavity distal anal canal distal urethra and distal vaginabasal cell stem cell cornea tongue mouth nasal cavity distal anal canal distal urethra and distal vaginaStriated duct cell salivary glands Lactiferous duct cell mammary glands Ameloblast deposit tooth enamel Odontoblast tooth dentin formation Oral cellsCementoblast tooth cementum formation Auditory inner hair cells of organ of Corti Sensory transducer cellsAuditory outer hair cells of organ of CortiBasal cells of olfactory epithelium stem cell for olfactory neurons Cold sensitive primary sensory neuronsHeat sensitive primary sensory neuronsMerkel cells of epidermisOlfactory receptor neuronsPain sensitive primary sensory neuronsPhotoreceptor rod cells Photoreceptor cells of retina in eyePhotoreceptor blue sensitive cone cells of eye Photoreceptor cells of retina in eyePhotoreceptor green sensitive cone cells of eye Photoreceptor cells of retina in eyePhotoreceptor red sensitive cone cells of eye Photoreceptor cells of retina in eyeProprioceptive primary sensory neuronsTouch sensitive primary sensory neuronsChemoreceptor glomus cells of carotid body cell blood pH sensor Outer hair cells of vestibular system of ear acceleration and gravity Inner hair cells of vestibular system of earTaste receptor cells of taste budCholinergic neurons various types Autonomic neuron cellsAdrenergic neural cells various types Peptidergic neural cells various types Inner pillar cells of organ of Corti Sense organ and peripheral neuron supporting cellsOuter pillar cells of the organ of CortiInner phalangeal cells of organ of CortiOuter phalangeal cells of organ of CortiBorder cells of organ of CortiHensen s cells of organ of CortiVestibular apparatus supporting cellsTaste bud supporting cellsOlfactory epithelium supporting cellsOlfactory ensheathing cellsSchwann cellsSatellite glial cellsEnteric glial cellsBasket cells Central nervous system neurons and glial cells Neuron InterneuronsCartwheel cells InterneuronsStellate cells InterneuronsGolgi cells InterneuronsGranule cells InterneuronsLugaro cells InterneuronsUnipolar brush cells InterneuronsMartinotti cells InterneuronsChandelier cells InterneuronsCajal Retzius cells InterneuronsDouble bouquet cells InterneuronsNeurogliaform cells InterneuronsRetina horizontal cells InterneuronsStarburst amacrine cells Interneurons gt Amacrine cellsRenshaw cells Interneurons gt Spinal interneuronsSpindle neurons Principal cellsFork neurons Principal cellsPlace cells Principal cells gt Pyramidal cellsGrid cells Principal cells gt Pyramidal cellsSpeed cells Principal cells gt Pyramidal cellsHead direction cells Principal cells gt Pyramidal cellsBetz cells Principal cells gt Pyramidal cellsBoundary cells Principal cells gt Stellate cellsBushy cells Principal cellsPurkinje cells Principal cellsMedium spiny neurons Principal cellsAstrocytesOligodendrocytesTanycytes Ependymal cellsPituicytesAnterior lens epithelial cell Lens cellsCrystallin containing lens fiber cellWhite fat cell Right atrium atrioventricular junction left atrium left ventricle right ventricle epicardium Myocardium atriventricular node Metabolism and storage cells Adipocytes Mesoderm gene FASN GPAM LEP 17 Brown fat cellLiver lipocyteCells of the Zona glomerulosa produce mineralocorticoids Secretory cells Cells of the adrenal cortexCells of the Zona fasciculata produce glucocorticoidsCells of the zona reticularis produce androgensTheca Interna cell ovarian follicle secreting estrogenCorpus luteum cell ruptured ovarian follicle secreting progesteroneGranulosa lutein cells Corpus luteum cellTheca lutein cellsLeydig cell testes secreting testosteroneSeminal vesicle cell secretes seminal fluid components including fructose for swimming sperm Prostate gland cell secretes seminal fluid components Bulbourethral gland cell mucus secretion Bartholin s gland cell vaginal lubricant secretion Gland of Littre cell mucus secretion Uterus endometrium cell carbohydrate secretion Juxtaglomerular cell renin secretion Macula densa cell kidneyPeripolar cellMesangial cellParietal epithelial cell Urinary system Barrier cellsPodocyteProximal tubule brush border cellLoop of Henle thin segment cellKidney distal tubule cellPrincipal cell Kidney collecting duct cellIntercalated cell Epithelial Barrier cells MesodermTransitional epithelium lining urinary bladder Barrier cells MesodermDuct cell of seminal vesicle prostate gland etc Reproductive system Barrier cellsEfferent ducts cellEpididymal principal cellEpididymal basal cellEndothelial cells Circulatory system capillary ABCC9 KCNJ8 RGS5Planum semilunar epithelial cell of vestibular system of ear proteoglycan secretion Extracellular matrix cellsOrgan of Corti interdental epithelial cell secreting tectorial membrane covering hair cells Loose connective tissue fibroblastsCorneal fibroblasts corneal keratocytes Tendon fibroblastsBone marrow reticular tissue fibroblastsOther nonepithelial fibroblastsHepatic stellate cell Ito cell Liver PericyteNucleus pulposus cell intervertebral discHyaline cartilage chondrocyteFibrocartilage chondrocyteElastic cartilage chondrocyteOsteoblast osteocyteOsteoprogenitor cell stem cell of osteoblasts Hyalocyte vitreous body of eyeStellate cell perilymphatic space of the earPancreatic stellate cellRed skeletal muscle cell slow twitch Contractile cells Skeletal muscle cellsWhite skeletal muscle cell fast twitch Intermediate skeletal muscle cellNuclear bag cell muscle spindleNuclear chain cell muscle spindleMyosatellite cell stem cell Cardiac muscle cell Cardiac muscle cellsSA node cellPurkinje fiber cellSmooth muscle cell various types irisMyoepithelial cell exocrine glandsErythrocyte red blood cell erythroblasts Blood and immune system cellsMegakaryocyte platelet precursor Platelets if considered distinct cells currently there s debate on the subject Monocyte white blood cell Connective tissue macrophage various types Epidermal Langerhans cellOsteoclast in boneDendritic cell in lymphoid tissues Microglial cell in central nervous system Neutrophil granulocyte precursors myeloblast promyelocyte myelocyte metamyelocyte Eosinophil granulocyte and precursors Basophil granulocyte and precursors Mast cellHelper T cellRegulatory T cellCytotoxic T cellNatural killer T cellB cell lymphocyte Left atrium left ventricle septum right ventricle epicaridum MyocardiumPlasma cellNatural killer cellHematopoietic stem cells and committed progenitors for the blood and immune system various types Oogonium oocyte Germ cellsSpermatidSpermatocyteSpermatogonium cell Stem cell for spermatocyteSpermatozoonGranulosa cell In the ovaries Nurse cellsSertoli cell In the testisEpithelial reticular cell In the thymusInterstitial kidney cells Kidney Interstitial cellsAmex 153 unknown unknown brain None None unknown None PPP1R1C FER1L6 AS2 RP11 421N8 3Amex 154 unknown unknown brain None None unknown None DCSTAMP PTGER3 RP11 412K20 1 RP11 33A14 1Amex 155 unknown unknown brain None None unknown None RP11 412K20 1 CTD 2195H9 1 RP11 421N8 3Amex 156 unknown unknown brain None None unknown None TACR3 MOXD1 RP11 799O21 2 RP11 63G10 4Amex 157 unknown unknown brain None None unknown None TG LAMA3 RP11 799O21 2Amex 158 unknown unknown brain None None unknown None TACR3 WDR86 NPFFR2Amex 159 unknown unknown brain None None unknown None POSTN LINC01821 CALCRLAmex 160 unknown unknown brain None None unknown None PTGER3 PLEKHG4B NPFFR2 MSC AS1Amex 161 unknown unknown brain None None unknown None MEPE TG S100ZAmex 162 unknown unknown brain None None unknown None POSTN CCBE1 AC067959 1Amex 171 unknown unknown brain None None unknown None LINC01876 RP11 60A8 1 CTD 2058B24 2Amex 172 unknown unknown brain None None unknown None CRHR2 LINC02055 RP11 60A8 1 RP11 370B11 4Amex 173 unknown unknown brain None None unknown None AC092684 1 RP11 60A8 1Amex 174 unknown unknown brain None None unknown None FER1L6 AS2 RP11 418J17 3 RP11 60A8 1Amex 175 unknown unknown brain None None unknown None LINC02248 RP11 153I24 5Amex 405 unknown unknown brain None None unknown None RXFP1 NDST4 PRLR MEIS2 CDH13Amex 406 unknown unknown brain None None unknown None RXFP2 CARTPT IRAG2Amex 407 unknown unknown brain None None unknown None PAPPA2 LHX9Amex 408 unknown unknown brain None None unknown None EOMES HPSE2 RELNAmex 419 unknown unknown brain None None unknown None SCN5A CARM1P1 PTH2R NR2F2 AS1 CTC 552D5 1Astro L1 FGFR3 SERPINI2 unknown unknown brain None None unknown None CFAP47 WDR49Astro L1 6 FGFR3 AQP1 unknown unknown brain None None unknown None TNCAstro L1 6 FGFR3 PLCG1 unknown unknown brain None None unknown None COL5A3 LOC105376917Astro 52 unknown unknown brain None None unknown None LINC01727 COL5A3Astro 53 unknown unknown brain None None unknown None GLI3 COL5A3Astro 54 unknown unknown brain None None unknown None F11 AS1 ETNPPL GLI3 OBI1 AS1Astro 55 unknown unknown brain None None unknown None FGFR3 HPSE2 WIF1Astro 56 unknown unknown brain None None unknown None TNC OBI1 AS1 GPC5Astro 57 unknown unknown brain None None unknown None TNC FGFR3 OBI1 AS1 LINC00609 RP11 134O15 3Astro 58 unknown unknown brain None None unknown None ID3 LINC00499 FGFR3Astro 59 unknown unknown brain None None unknown None LGR6 ITPRID1 OBI1 AS1 HPSE2Astro 60 unknown unknown brain None None unknown None TNC LINC00499 EDNRB APOEAstro 61 unknown unknown brain None None unknown None AQP1 GFAP RP11 259K15 2Astro 62 unknown unknown brain None None unknown None TNC LINC00836 APOEAstro 63 unknown unknown brain None None unknown None GFAP CRYABAstro 64 unknown unknown brain None None unknown None RP11 297I23 1 RP11 517I3 1Astrocyte unknown unknown spinal cord None None unknown None SLC14A1B Cell unknown unknown lymph node None None unknown None CD19 MS4A1 HLA DRAB Cell Zone Reticular Cell unknown unknown lymph node None None unknown None CXCL12 TNFSF11B cell unknown unknown large intestine None None unknown None CD21 CD19 CD20 CD79aB cell unknown unknown large intestine None None unknown None CD19 CD79aB cell unknown unknown large intestine None None unknown None CD11b CD294B cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A MS4A1 BANK1 CD79A CD22 BANK1 CD19B cell unknown unknown Small Intestine None None unknown None MKI67 MS4A1 PAX5B cell unknown unknown Uterus None None unknown None CD69 CCL5 MS4A1 CXCR4BCHE butyrylcholinesterase cell unknown unknown Small Intestine None None unknown None BEST4 CFTR guanylin uroguanylinBcell 0 unknown unknown brain None None unknown None MS4A1Bgl 51 unknown unknown brain None None unknown None LINC01727 LAMA2Blood Vessel Endothelial Cell unknown unknown lymph node None None unknown None CAV1 CCL14 CD34 CD74 CD209 CD300LG DARC EMCN ESAM ICAM1 JAM2 HLA DRA HLA DRB1 HLA DPA1 HLA DPB1 MARCO PLVAP PVRL2 SPARCL1CA13 119 unknown unknown brain None None unknown None CTXND1 RP11 153I24 5CA13 163 unknown unknown brain None None unknown None POSTN AC004862 6CA13 169 unknown unknown brain None None unknown None ITGA4 RP11 191L9 4CA13 179 unknown unknown brain None None unknown None COL5A2 COL24A1 AC004538 3CA13 180 unknown unknown brain None None unknown None BHLHE22 RP11 142C4 6 AC004538 3CA13 181 unknown unknown brain None None unknown None SLC30A8 COL5A2 AC004538 3CA13 182 unknown unknown brain None None unknown None FNDC1 CTXND1 COL5A2 RP11 167H9 4 RP11 60A8 1 AC004538 3CA13 183 unknown unknown brain None None unknown None ABCA13 CASC6 RP11 60A8 1 AC004538 3CA13 184 unknown unknown brain None None unknown None LINC02153 RP11 60A8 1 AC004538 3CA13 185 unknown unknown brain None None unknown None NTS LINC02153 RP11 60A8 1CA13 186 unknown unknown brain None None unknown None NTS RP11 369E15 3CA13 187 unknown unknown brain None None unknown None GABRQ ITGA4 AC004538 3CA13 188 unknown unknown brain None None unknown None CTXND1 LINC02055 COL24A1 CCBE1CA13 189 unknown unknown brain None None unknown None CCN1 CTXND1 ATP10ACA4 190 unknown unknown brain None None unknown None HGF FREM2CA4 191 unknown unknown brain None None unknown None NTS ST18CA4 192 unknown unknown brain None None unknown None CASR ITGA4 ATP10ACA4 193 unknown unknown brain None None unknown None SCGN SLC47A1 XACT HHIPCA4 194 unknown unknown brain None None unknown None HOPX RPL26 C9orf16CA4 195 unknown unknown brain None None unknown None ITGA4 NPNT COL5A2 HHIPCA4 196 unknown unknown brain None None unknown None LINC02196 ITGA4CA4 197 unknown unknown brain None None unknown None LINC02196 RP11 719N9 1CA4 198 unknown unknown brain None None unknown None CTXND1 COL5A2 EYSCAP1 general capillary gCap unknown unknown respiratory system None None unknown None CLDN5 NOTCH4 CLEC14A ECSCR DTL IL7R APLNR PLVAP GPIHBP1CAP2 aerocyte capillary aCap unknown unknown respiratory system None None unknown None CLDN5 NOTCH4 CLEC14A ECSCR EDNRB APLN CA4CBI 298 unknown unknown brain None None unknown None SLC6A5 VCAN RELNCBI 299 unknown unknown brain None None unknown None SLC6A5 IGF2BP2 FNDC1CBI 300 unknown unknown brain None None unknown None SLC4A11 NDNFCBI 301 unknown unknown brain None None unknown None SLC6A5 SCIN RREB1CBI 302 unknown unknown brain None None unknown None CPLX4 RP11 265I24 1CBI 303 unknown unknown brain None None unknown None LYPD6 RP11 265I24 1CBI 304 unknown unknown brain None None unknown None SCGN RP11 274H24 2CBI 305 unknown unknown brain None None unknown None TFAP2B NTN1 LINC02552 BMPR1BCBI 306 unknown unknown brain None None unknown None SCGN MARCHF11 PTPRKCBI 307 unknown unknown brain None None unknown None SCGN LINC02552 VCAN NXPH1CD14 monocyte unknown unknown Blood None None unknown None VCAN CST3 CD14 S100A8 S100A9 FCN1CD14 monocyte unknown unknown Bone marrow None None unknown None VCAN CST3 CD14 S100A8 S100A9 FCN1CD16 monocyte unknown unknown Blood None None unknown None HES4 MS4A7 IFITM3 FCGR3A CXCL16 LST1CD16 monocyte unknown unknown Bone marrow None None unknown None HES4 MS4A7 IFITM3 FCGR3A CXCL16 LST1CD4 T cell effector memory CD45RA unknown unknown Blood None None unknown None CD3D TRAC IL4R STAT1 MAL SOCS1 IL2 ODC1 PSAT1 WARS PYCR1 TNF NME1CD4 T cell effector memory CD45RA unknown unknown Bone marrow None None unknown None CD3D TRAC IL4R STAT1 MAL SOCS1 IL2 ODC1 PSAT1 WARS PYCR1 TNF NME1CD4 T cell memory unknown unknown Blood None None unknown None CD3D TRAC IFI6 LGALS3 PDZD8 ANXA2 CRIP1CD4 T cell memory unknown unknown Blood None None unknown None CD3D TRAC IL4R STAT1 MAL SOCS1 IL2 ODC1 PSAT1 WARS PYCR1 TNF NME1CD4 T cell memory unknown unknown Blood None None unknown None PDZD8 CXCR6 PRF1 CRIP1 ITGA1 GZMBCD4 T cell memory unknown unknown Bone marrow None None unknown None CD3D TRAC IFI6 LGALS3 PDZD8 ANXA2 CRIP1CD4 T cell memory unknown unknown Bone marrow None None unknown None CD3D TRAC IL4R STAT1 MAL SOCS1 IL2 ODC1 PSAT1 WARS PYCR1 TNF NME1CD4 naive unknown unknown Blood None None unknown None CD3D TRAC TRBC1 IL7R TRAT1 LTB AQP3 CD40LGCD4 naive unknown unknown Bone marrow None None unknown None CD3D TRAC TRBC1 IL7R TRAT1 LTB AQP3 CD40LGCD4 T unknown unknown Small Intestine None None unknown None CD3D CD2 CD4CD4 T cell unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD3 TCR CD4CD4 T cell unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD4CD4 T cell resident memory unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A CD3E IL7R CD69 CD44 CD4CD4 T memory T cell unknown unknown thoracic thymus None None unknown None ANXA1 AP3M2 CCR7 CD69 GPR183 IL7R KLF2 LTB RGCC RPL36ACD4 T single positive thymocyte unknown unknown thoracic thymus None None unknown None ABLIM1 ADD3 C1orf228 CAMK4 DENND2D GIMAP7 ID2 RPL17 SELLCD4 T single positive thymocyte unknown unknown thoracic thymus None None unknown None ABLIM1 ADD3 SELL CAMK4 DENND2D GIMAP7 ID2 RPL17CD56 bright Natural Killer unknown unknown Bone marrow None None unknown None TRDC KLRB1 CLIC3 CST7 XCL1 GZMKCD56 bright Natural killer unknown unknown Blood None None unknown None TRDC KLRB1 CLIC3 CST7 XCL1 GZMKCD8 T cell effector memory unknown unknown Blood None None unknown None CD3D TRAC CCL3 CCL4 HOPX GZMBCD8 T cell effector memory unknown unknown Bone marrow None None unknown None CD3D TRAC CCL3 CCL4 HOPX GZMBCD8 T cell effector memory CD45RA unknown unknown Blood None None unknown None CD3D TRAC PRF1 HOPX NKG7 GNLY IFIT3 KLRD1 CCL5CD8 T cell effector memory CD45RA unknown unknown Bone marrow None None unknown None CD3D TRAC PRF1 HOPX NKG7 GNLY IFIT3 KLRD1 CCL5CD8 T cell memory unknown unknown Bone marrow None None unknown None PDZD8 CXCR6 PRF1 CRIP1 ITGA1 GZMBCD8 naive unknown unknown Blood None None unknown None CD3D TRAC AQP3 IL7RCD8 naive unknown unknown Bone marrow None None unknown None CD3D TRAC AQP3 IL7RCD8 T unknown unknown Small Intestine None None unknown None MGLL TAGLN CD3D CD8A CD2CD8 T cell unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD3 TCR CD8CD8 T cell resident memory unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A CD3E IL7R CD69 CD8A NOTCH1 ITGA1 ITGAECD8 T memory unknown unknown thoracic thymus None None unknown None CCL4 CCL5 CD8A CD8B CRTAM CST7 GZMK LYAR NKG7 RGCCCD8 T single positive thymocyte unknown unknown thoracic thymus None None unknown None ACTN1 CD7 CD8A CD8B CHI3L2 GZMM IL7R LRRN3 STK17ACD8aa I thymocyte unknown unknown thoracic thymus None None unknown None CD2 CD8A CD27 CD28 LCP2 LEF1 NUCB2 PRKCH PTPN7 TRACCD8aa II thymocyte unknown unknown thoracic thymus None None unknown None ACTN1 CD7 CTSW HCST IKZF2 MME SMC4 SMIM24 TRGC2 ZNF683CGE 276 unknown unknown brain None None unknown None VIP SVEP1CGE 277 unknown unknown brain None None unknown None SCGN DDR2CGE 278 unknown unknown brain None None unknown None DDR2 WIF1 CHRNA7CGE 279 unknown unknown brain None None unknown None FREM2 CXCL14 DOCK8CGE 280 unknown unknown brain None None unknown None LAMA3 CTD 2008L17 2CGE 281 unknown unknown brain None None unknown None HTR3A EDNRACGE 282 unknown unknown brain None None unknown None ADAM33 CTC 367F4 1CGE 283 unknown unknown brain None None unknown None CXCL14 SGO1 AS1 SYT10 SEMA3CCGE 284 unknown unknown brain None None unknown None PCDH18 CCN2 CXCL14 RP1 35C21 2CGE 285 unknown unknown brain None None unknown None VIP PENKCGE 286 unknown unknown brain None None unknown None NMBR NDNF CXCL14CGE 287 unknown unknown brain None None unknown None MYH11 ADAMTS20 EYA4CGE 288 unknown unknown brain None None unknown None CXCL14 CRH ROR2 CA2CGE 289 unknown unknown brain None None unknown None TAC3 AJ006995 3 AC133680 1CGE 290 unknown unknown brain None None unknown None FLT1 VIP CHRM2CGE 291 unknown unknown brain None None unknown None NPR3 EDNRA RP1 35C21 2CGE 292 unknown unknown brain None None unknown None NPR3 PPP1R1C CRH RP11 197H3 1CGE 293 unknown unknown brain None None unknown None HS3ST3A1 IQGAP2 RP11 197H3 1CGE 294 unknown unknown brain None None unknown None ABI3BP VIPCGE 295 unknown unknown brain None None unknown None VIP CRH RXRG RP11 197H3 1CGE 296 unknown unknown brain None None unknown None TAC3 CXCL14 CMTM8 LYPD6COP 37 unknown unknown brain None None unknown None GPR17 BCAS1 PRRX1COP 38 unknown unknown brain None None unknown None BCAS1 RP11 89N17 4COP 39 unknown unknown brain None None unknown None TF CTD 2545M3 8COP 41 unknown unknown brain None None unknown None OPALIN AC084149 2COP 42 unknown unknown brain None None unknown None LINC01608 CNDP1 NTNG1COP 43 unknown unknown brain None None unknown None SLC5A11 MOBPCOP 75 unknown unknown brain None None unknown None FOLR1 C1QTNF5Centroblast unknown unknown lymph node None None unknown None AICDA BCL6 CD19 CD27 CXCR4 Mki67 MS4A1Centrocyte unknown unknown lymph node None None unknown None BCL6 CD19 CD83 Mki67 MS4A1Chrp 76 unknown unknown brain None None unknown None PLP1 OTX2 AS1 ST18 RP11 690J15 1Chrp 77 unknown unknown brain None None unknown None FOLR1 SERPINF1 RP11 690J15 1Chrp 78 unknown unknown brain None None unknown None POU2AF1 CRYBG1 RP11 729M20 1Chrp 79 unknown unknown brain None None unknown None POU2AF1 TRPV4 ABCA4Chrp 80 unknown unknown brain None None unknown None HS3ST3A1 RP11 690J15 1Chrp 81 unknown unknown brain None None unknown None HPD C1QTNF5Chrp 82 unknown unknown brain None None unknown None GPNMB TTRConventional Dendritic Cell cDC1 unknown unknown lymph node None None unknown None XCR1 CADM1 CLEC9A BATF3 IDO1Conventional Dendritic Cell cDC2 unknown unknown lymph node None None unknown None CD1C CLEC10A CD86Cycling B unknown unknown palatine tonsil None None unknown None E2F8 CDCA2 NUGGC CLSPN ANLN MYBL1 FAM111B KIF4A NUF2 GTSE1DG 199 unknown unknown brain None None unknown None POSTN bP 21201H5 1DG 200 unknown unknown brain None None unknown None CHRNA1 SCART1 RP11 217C7 1DG 201 unknown unknown brain None None unknown None SLC47A1 RP11 217C7 1 RP11 719N9 1DG 202 unknown unknown brain None None unknown None TTR ADRA1A RP11 719N9 1DG 203 unknown unknown brain None None unknown None LINC02248 ST18 RP11 484N11 1DG 204 unknown unknown brain None None unknown None LINC00499 TTR CASC6 RP11 287J11 1DG 205 unknown unknown brain None None unknown None CTD 2215L10 1 RP11 217C7 1 RP11 287J11 1DLCT6b 100 unknown unknown brain None None unknown None SULF1 LINC02232 RXFP1 SEMA5ADLCT6b 101 unknown unknown brain None None unknown None NFIA AS2 RP11 120L14 1 RP11 467L24 1DLCT6b 102 unknown unknown brain None None unknown None LINC01821 ADAMTSL1 RP11 467L24 1 AC064875 2DLCT6b 103 unknown unknown brain None None unknown None CCN2 PLA2G4A RP11 467L24 1DLCT6b 104 unknown unknown brain None None unknown None TRIM22 RP11 467L24 1DLCT6b 105 unknown unknown brain None None unknown None LINC01680 CCN2 RP4 736H5 3DLCT6b 106 unknown unknown brain None None unknown None EDNRA RP11 81D17 1 CTD 2050E21 1DLCT6b 107 unknown unknown brain None None unknown None ITGA11 SYT6DLCT6b 108 unknown unknown brain None None unknown None LINC01821 ADAMTSL1 SEMA3E CTB 57H20 1 RP11 369E15 3DLCT6b 109 unknown unknown brain None None unknown None LINC02153 LINC02263 LINC01821 RP11 369E15 3 AC114765 1DLCT6b 110 unknown unknown brain None None unknown None CAV1 TRIM22 SULF1 RP11 640F22 1DLCT6b 111 unknown unknown brain None None unknown None TMEM233 GABRQ FBXL21P SULF1DLCT6b 112 unknown unknown brain None None unknown None SULF1 MSC AS1 RP11 467L24 1DLCT6b 84 unknown unknown brain None None unknown None SLC9C1 POSTN NPSR1 AS1DLCT6b 97 unknown unknown brain None None unknown None GUCA1C RP11 238K6 2DLCT6b 98 unknown unknown brain None None unknown None CDH24 IL15 ERGDLCT6b 99 unknown unknown brain None None unknown None DPP4 RP11 467L24 1 FAM160A1DLIT 136 unknown unknown brain None None unknown None RP11 404H1 1 RP11 114G22 1DLIT 137 unknown unknown brain None None unknown None LINC02196 AC005150 1 CTD 2195H9 1DLIT 139 unknown unknown brain None None unknown None RP11 79E3 2 AC005150 1DLIT 140 unknown unknown brain None None unknown None LINC02263 RP11 79E3 2 RP11 320L2 1 CTB 57H20 1DLIT 141 unknown unknown brain None None unknown None RORB NPNT RP11 511B7 2 RP11 320L2 1DLIT 142 unknown unknown brain None None unknown None THEMIS CTD 2195H9 1 CTC 535M15 2DLIT 143 unknown unknown brain None None unknown None LINC01821 CMTM8 AC005150 1DLIT 144 unknown unknown brain None None unknown None LINC02263 AC005150 1 RP11 320L2 1 RP11 537P24 1DLIT 145 unknown unknown brain None None unknown None ALKAL2 LINC02237 AJ006998 2DLIT 146 unknown unknown brain None None unknown None FBXL21P ADAMTS16 CBLN2 SNTG2DLIT 147 unknown unknown brain None None unknown None CCN4 RP4 809F18 1DLIT 148 unknown unknown brain None None unknown None MCUB POU6F2 ADAMTS3DLIT 149 unknown unknown brain None None unknown None LINC00343 THEMIS TESPA1 CTD 2050E21 2 RP11 191L9 4DLIT 150 unknown unknown brain None None unknown None THEMIS POSTN HPSE2DLIT 151 unknown unknown brain None None unknown None ATP10A RP11 81F8 1DLIT 152 unknown unknown brain None None unknown None PLA2G4A STK32BDLNP 83 unknown unknown brain None None unknown None RP11 34C15 2DLNP 85 unknown unknown brain None None unknown None TACR3 SGO1 AS1 FER1L6 AS2DLNP 86 unknown unknown brain None None unknown None IFNG AS1 PLPP3 ADRA1A PTPRTDLNP 87 unknown unknown brain None None unknown None SLC9C1 NPSR1 COL9A1 RP11 421N8 3DLNP 88 unknown unknown brain None None unknown None IFNG AS1 NPSR1 CD36 RP11 421N8 3DLNP 89 unknown unknown brain None None unknown None NPSR1 AS1 AE000661 37 RP11 66G15 1DLNP 90 unknown unknown brain None None unknown None IFNG AS1 AE000661 37 CTB 57H20 1DLNP 91 unknown unknown brain None None unknown None CD200R1L TRIM22 CTC 535M15 2 CTC 340A15 2DLNP 92 unknown unknown brain None None unknown None FSHR RP11 286O1 1 CTB 57H20 1DLNP 93 unknown unknown brain None None unknown None IFNG AS1 ROR1 NXPH2 CTB 57H20 1DLNP 94 unknown unknown brain None None unknown None CD200R1L ROBO3 RP11 511B7 2 RP11 421N8 3DLNP 95 unknown unknown brain None None unknown None MYOCD FSHR NPSR1 AS1 RP11 354I13 2DLNP 96 unknown unknown brain None None unknown None HMGA2 LINC02008Dendritic Cell unknown unknown lymph node None None unknown None ITGAX CD40 CD83 HLA DRADendritic Cell unknown unknown lymph node None None unknown None CD40 CD83 HLA DRADorsal Excitatory Neuron 1 unknown unknown spinal cord None None unknown None MAFA MYO10 COL6A2Dorsal Excitatory Neuron 10 unknown unknown spinal cord None None unknown None SOX5 TAC1 LMO3Dorsal Excitatory Neuron 11 unknown unknown spinal cord None None unknown None SOX5 NMU ISM1Dorsal Excitatory Neuron 12 unknown unknown spinal cord None None unknown None SOX5 NMU CALCBDorsal Excitatory Neuron 2 unknown unknown spinal cord None None unknown None MAFA CBLN1 NR2F1Dorsal Excitatory Neuron 3 unknown unknown spinal cord None None unknown None GABRB2 NR2F1 NTSDorsal Excitatory Neuron 4 unknown unknown spinal cord None None unknown None MAFA GABRB2 MAFDorsal Excitatory Neuron 5 unknown unknown spinal cord None None unknown None RELN PDE11A IQGAP2Dorsal Excitatory Neuron 6 unknown unknown spinal cord None None unknown None RELN PDE11A NMUR2Dorsal Excitatory Neuron 7 unknown unknown spinal cord None None unknown None TAC1 PDE11A NMUR2Dorsal Excitatory Neuron 8 unknown unknown spinal cord None None unknown None SOX5 TAC1 IGF1Dorsal Excitatory Neuron 9 unknown unknown spinal cord None None unknown None SOX5 TAC1 CARTPTDorsal Inhibitory Neuron 1 unknown unknown spinal cord None None unknown None NR2F2 CAPN8 LINC01197Dorsal Inhibitory Neuron 2 unknown unknown spinal cord None None unknown None PENK CAPN8 STK32BDorsal Inhibitory Neuron 3 unknown unknown spinal cord None None unknown None RORB P2RY1 CBLN4Dorsal Inhibitory Neuron 4 unknown unknown spinal cord None None unknown None ADARB2 CDHR3 NFATC1Dorsal Inhibitory Neuron 5 unknown unknown spinal cord None None unknown None ADARB2 CDHR3 CDH7Dorsal Inhibitory Neuron 6 unknown unknown spinal cord None None unknown None PDYN RORB SULF1Dorsal Inhibitory Neuron 7 unknown unknown spinal cord None None unknown None PDYN LEF1 CCKDorsal Inhibitory Neuron 8 unknown unknown spinal cord None None unknown None PDYN RORB PROX1Dorsal Inhibitory Neuron 9 unknown unknown spinal cord None None unknown None NPY SAMD3 HMCN1EMSN 222 unknown unknown brain None None unknown None PENK GFRA1 TAC1EMSN 223 unknown unknown brain None None unknown None CALCRL GFRA1 TAC1EMSN 224 unknown unknown brain None None unknown None TACR1 RXFP1 ALK FOXP2EMSN 225 unknown unknown brain None None unknown None CASZ1 LINC02137 LAMA3EMSN 226 unknown unknown brain None None unknown None CXCL14 PTPRQ EYA2 RXFP1EMSN 227 unknown unknown brain None None unknown None NPFFR2 XACT ONECUT2 FAM160A1EMSN 228 unknown unknown brain None None unknown None NPFFR2 MEIS1 SEMA3C ADAMTSL1 RP11 154H17 1EMSN 229 unknown unknown brain None None unknown None CACNG5 PTH2R MEIS1 TSHZ1 ADAMTSL1EMSN 230 unknown unknown brain None None unknown None EYA2 RXFP1 HRH3 ADAMTS3EMSN 231 unknown unknown brain None None unknown None NPFFR2 LMNTD1 RXFP1 PCDH11Y TLL1 VWC2LEMSN 232 unknown unknown brain None None unknown None CHRM5 ABCA1 RXFP1EMSN 233 unknown unknown brain None None unknown None ZNF736P9Y CADPS2 PCDH11X AC133680 1EMSN 234 unknown unknown brain None None unknown None PAX6 NPFFR2 PRLREMSN 426 unknown unknown brain None None unknown None MEIS1 TSHZ1 RP11 537P24 1Effector Chondrocyte unknown unknown knee None None unknown None STC2 CHAD IGFBP7Endo L2 5 NOSTRIN SRGN unknown unknown brain None None unknown None CLDN5Endothelial Cell unknown unknown spinal cord None None unknown None CLDN5Endothelial Cell of Lymphatic Vessel unknown unknown lymph node None None unknown None ACKR4 CAV1 NUDT4 NT5EEomes low Liver NK cell unknown unknown liver None None unknown None TBX21 eomesEpen 65 unknown unknown brain None None unknown None DTHD1 TNC FGFR3Epen 66 unknown unknown brain None None unknown None NTS AC018717 1Epen 67 unknown unknown brain None None unknown None ADGRD2 DTHD1 OBI1 AS1Epen 68 unknown unknown brain None None unknown None CRIP1 CAPS OR2B4PEpen 69 unknown unknown brain None None unknown None CAPS AC018717 1 RP11 624A4 2Epen 70 unknown unknown brain None None unknown None TRDN GRAMD2A OR2B4PEpen 71 unknown unknown brain None None unknown None SGMS2 DTHD1Epen 72 unknown unknown brain None None unknown None OR2B4P MGC4859 RP11 624A4 2Epen 73 unknown unknown brain None None unknown None RP11 624A4 2 AC018717 1 AC007682 1Epen 74 unknown unknown brain None None unknown None DTHD1 TTREpendymal Cell unknown unknown spinal cord None None unknown None CFAP73Exc L2 LAMP5 KCNG3 unknown unknown brain None None unknown None FAM163A LOC101927668 SAMD3Exc L2 LINC00507 ATP7B unknown unknown brain None None unknown None ACVR1C LOC105377209Exc L2 LINC00507 GLRA3 unknown unknown brain None None unknown None LINC01378 LOC101928278 SERPINE2Exc L2 3 LINC00507 DSG3 unknown unknown brain None None unknown None BDNF BMPR1B LOC105379003Exc L2 3 RORB CCDC68 unknown unknown brain None None unknown None COBLL1 COL5A2 PRSS12Exc L2 3 RORB PTPN3 unknown unknown brain None None unknown None COL5A2 LOC105370610 LOC105378334 RORBExc L2 3 RORB RTKN2 unknown unknown brain None None unknown None LOC101927745 LOC105376987 PLCH1 RMSTExc L3 LAMP5 CARM1P1 unknown unknown brain None None unknown None EPB41L4A SV2C SYT2Exc L3 RORB OTOGL unknown unknown brain None None unknown None COL22A1 RMSTExc L3 THEMIS ENPEP unknown unknown brain None None unknown None FAP LAMA2 LOC101928964 LOC105376081Exc L3 5 FEZF2 ASGR2 unknown unknown brain None None unknown None LOC105376457 OR51E2Exc L3 5 FEZF2 LINC01107 unknown unknown brain None None unknown None BTNL9 EDNRBExc L3 5 RORB LAMA4 unknown unknown brain None None unknown None KCNH8 LOC100128497 LOC101927281 LOC105376081 TRPExc L3 5 RORB LINC01202 unknown unknown brain None None unknown None LOC101927874 LOC105374971 LOC105376081 LOC105377703Exc L3 5 RORB LNX2 unknown unknown brain None None unknown None LOC105374971 LOC105377703 TRABD2AExc L3 5 RORB RPRM unknown unknown brain None None unknown None LOC105374971 LOC105374973 RPRMExc L3 5 RORB TNNT2 unknown unknown brain None None unknown None FSHR LOC100507562 LOC105376081Exc L5 FEZF2 CSN1S1 unknown unknown brain None None unknown None LOC105373592 OPN4 VAT1LExc L5 FEZF2 NREP AS1 unknown unknown brain None None unknown None ADAMTS12 CD36 LOC105370315Exc L5 FEZF2 PKD2L1 unknown unknown brain None None unknown None NPSR1 AS1 VGLL3Exc L5 FEZF2 RNF144A AS1 unknown unknown brain None None unknown None CD36 LOC105369818 LOC105370019Exc L5 RORB MED8 unknown unknown brain None None unknown None COL22A1 LOC401134 NPFFR2Exc L5 THEMIS FGF10 unknown unknown brain None None unknown None BDNF CRH NPFFR2Exc L5 THEMIS LINC01116 unknown unknown brain None None unknown None LOC105369890 LOC105371663Exc L5 THEMIS RGPD6 unknown unknown brain None None unknown None DDR2 LOC105371663 THEMISExc L5 THEMIS SLC22A18 unknown unknown brain None None unknown None BTNL9 CCBE1 LOC401134 SLC7A11Exc L5 THEMIS VILL unknown unknown brain None None unknown None DACH1 LOC101927389 TNCExc L5 6 FEZF2 C9orf135 AS1 unknown unknown brain None None unknown None EGFEM1P FOXP2 SEMA5AExc L5 6 FEZF2 CFTR unknown unknown brain None None unknown None LOC105374392 NR4A2 SEMA3DExc L5 6 FEZF2 FILIP1L unknown unknown brain None None unknown None LOC100128497 MCTP2 SEC16B SULF1Exc L5 6 FEZF2 IFNG AS1 unknown unknown brain None None unknown None LOC105369818 NPSR1 AS1Exc L5 6 FEZF2 LPO unknown unknown brain None None unknown None LOC101928114 LOC105376372Exc L5 6 FEZF2 OR1L8 unknown unknown brain None None unknown None LGR6 LOC101927439 LOC105374392 LOC105377183Exc L5 6 FEZF2 SH2D1B unknown unknown brain None None unknown None ADAMTSL1 MEIS2 NLGN4Y PAPSS2Exc L5 6 THEMIS SMYD1 L6 IT Car3 unknown unknown brain None None unknown None ATP10A TRPC5Exc L5 6 THEMIS TNFAIP6 unknown unknown brain None None unknown None LOC105373893 LOC105378031 LTBP1 TSHZ2Exc L6 FEZF2 FFAR4 unknown unknown brain None None unknown None FER1L6 AS2 LOC105378486Exc L6 FEZF2 KLK7 unknown unknown brain None None unknown None LOC101927439 MDFICExc L6 FEZF2 PDYN unknown unknown brain None None unknown None GBP2 PDYNExc L6 FEZF2 POGK unknown unknown brain None None unknown None ADD3 AS1 LOC100132891 PCOLCE2Exc L6 FEZF2 PROKR2 unknown unknown brain None None unknown None LOC105371310 SLITRK6Exc L6 THEMIS LINC00343 unknown unknown brain None None unknown None ANKRD30B LINC00299 LINC00343Exc L6 THEMIS SLN unknown unknown brain None None unknown None FAM163A LOC105371832 LOC105374524Exc L6 THEMIS SNTG2 unknown unknown brain None None unknown None LOC101927389 LOC105371310Fbl 24 unknown unknown brain None None unknown None C7 BMP5Fbl 25 unknown unknown brain None None unknown None LTBP2 TBX18Fbl 26 unknown unknown brain None None unknown None SLC6A20 COL15A1Fbl 27 unknown unknown brain None None unknown None FMO2 LINC02147 ABCA8Fbl 28 unknown unknown brain None None unknown None C7 FBLN2 COL1A2Fbl 29 unknown unknown brain None None unknown None SLC2A1 EBF2 BMPR1BFbl 30 unknown unknown brain None None unknown None SLC5A5 RP11 354K4 2Fbl 31 unknown unknown brain None None unknown None PTGDR BNC2Fibrocartilage Chondrocyte 1 unknown unknown knee None None unknown None MSMP COL3A1 COL1A2Fibrocartilage Chondrocyte 2 unknown unknown knee None None unknown None IGFBP5 PRG4 CTHRC1Follicular Dendritic Cell unknown unknown lymph node None None unknown None CR2 CXCL13 FCGRB MADCAM1 MFGE8 VCAM1Follicular Dendritic Cell unknown unknown lymph node None None unknown None CR2 CXCL13 FCER2A FCGRB MADCAM1 MFGE8 VCAM1Gamma Delta T cells unknown unknown lymph node None None unknown None CD3D TRDC ID2 KLRD1Homeostatic Chodrocyte unknown unknown knee None None unknown None MMP3 CCL2 RCAN1Hypertrophic Chondrocyte unknown unknown knee None None unknown None IBSP SPP1 COL10A1ILF lymphatic endothelium unknown unknown large intestine None None unknown None LYVE 1ILV high endothelial venule endothelium unknown unknown large intestine None None unknown None MADCAM1Inh L1 LAMP5 BMP2 unknown unknown brain None None unknown None COL5A2 FREM1Inh L1 LAMP5 NMBR unknown unknown brain None None unknown None PCDH18 RELNInh L1 LAMP5 PVRL2 unknown unknown brain None None unknown None CBLN4 HS3ST5 RELN TRPC3Inh L1 LAMP5 RAB11FIP1 unknown unknown brain None None unknown None ADAMTS20 FREM1 MYH11Inh L1 PAX6 CHRFAM7A unknown unknown brain None None unknown None CHRNA7 CNR1 LINC01539Inh L1 PAX6 MIR101 1 unknown unknown brain None None unknown None RELN TGFBR2Inh L1 PVALB SST ASIC4 unknown unknown brain None None unknown None ADAM33 NCKAP5 PRELID2Inh L1 SST DEFB108B unknown unknown brain None None unknown None NDST4 SYT10Inh L1 SST P4HA3 unknown unknown brain None None unknown None ARHGAP42 FOXO1 ST8SIA6Inh L1 VIP KLHDC8B unknown unknown brain None None unknown None ITGBL1 SLITRK4Inh L1 2 PVALB CDK20 unknown unknown brain None None unknown None ADAMTS12 SYT10 TMEM132CInh L1 2 SST CCNJL unknown unknown brain None None unknown None CALB1 SPHKAP TMEM132CInh L1 2 SST CLIC6 unknown unknown brain None None unknown None ARHGAP42 NEDD4 TAC1Inh L1 2 SST PRRT4 unknown unknown brain None None unknown None LOC101927843 LOC101929028Inh L1 2 VIP EXPH5 unknown unknown brain None None unknown None SCTR ST18Inh L1 2 VIP HTR3A unknown unknown brain None None unknown None HTR3A LOC105373642Inh L1 2 VIP PTGER3 unknown unknown brain None None unknown None KCNH8 PARD3B SYT10Inh L1 2 VIP SCML4 unknown unknown brain None None unknown None ABI3BP KCNH8 LOC100506497Inh L1 2 VIP WNT4 unknown unknown brain None None unknown None LOC105379064 SYT9Inh L1 3 SST FAM20A unknown unknown brain None None unknown None PCSK5 TAC1Inh L1 3 VIP CBLN1 unknown unknown brain None None unknown None HTR2C LOC284825 TAC3Inh L1 3 VIP CHRNA2 unknown unknown brain None None unknown None EYA4 LOC105373642 PPP1R1CInh L1 3 VIP FNDC1 unknown unknown brain None None unknown None KCNH8 LOC101927286 LOC101928842Inh L1 3 VIP HSPB6 unknown unknown brain None None unknown None CCNG2 IGFBP5Inh L1 5 VIP CD27 AS1 unknown unknown brain None None unknown None ANKFN1 EGFEM1P IQGAP2Inh L1 5 VIP LINC01013 unknown unknown brain None None unknown None DACH2 SRGAP1 THSD7BInh L1 5 VIP PHLDB3 unknown unknown brain None None unknown None EGF THSD7BInh L1 5 VIP SMOC1 unknown unknown brain None None unknown None ANGPT1 SMOC1 VIPInh L1 6 LAMP5 AARD unknown unknown brain None None unknown None FBXL7 FREM1 KIT PRELID2Inh L1 6 LAMP5 CA1 unknown unknown brain None None unknown None HS3ST4 NOS1Inh L1 6 LAMP5 NES unknown unknown brain None None unknown None EPHA3 EYA4 KIT NTNG1 ROInh L1 6 PVALB COL15A1 Chandelier unknown unknown brain None None unknown None COL15A1 NPNTInh L1 6 SST NPY Sst Chodl unknown unknown brain None None unknown None NPYInh L1 6 VIP SLC7A6OS unknown unknown brain None None unknown None CNR1 PBX3Inh L2 PAX6 FREM2 unknown unknown brain None None unknown None CILP2 IGFBP7Inh L2 PVALB FRZB unknown unknown brain None None unknown None CBLN4 RGS5 SLC9A9Inh L2 VIP SLC6A16 unknown unknown brain None None unknown None KCNT2 LOC105370456Inh L2 3 SST NMU unknown unknown brain None None unknown None HPSE2 NOS1 PIEZO2Inh L2 5 PVALB HHIPL1 unknown unknown brain None None unknown None ADAMTS17 ADAMTS20 MDFICInh L2 5 PVALB RPH3AL unknown unknown brain None None unknown None ARHGAP42 MYO5B POSTN WIF1Inh L2 5 VIP BSPRY unknown unknown brain None None unknown None LOC101927078 PDE3A ST18Inh L2 5 VIP SOX11 unknown unknown brain None None unknown None ADAMTSL1 HTR2C THSD7BInh L3 PVALB SAMD13 unknown unknown brain None None unknown None LOC101928964 SULF1Inh L3 5 PVALB ISG20 unknown unknown brain None None unknown None LOC101926942 LOC105377862 SV2CInh L3 5 SST CDH3 unknown unknown brain None None unknown None FREM1 NPNT QRFPRInh L3 5 SST GGTLC3 unknown unknown brain None None unknown None EYS RELNInh L3 5 SST OR5AH1P unknown unknown brain None None unknown None ADAMTS5 FBXL7 SSTInh L3 5 VIP HS3ST3A1 unknown unknown brain None None unknown None ABI3BP IQGAP2 SLC22A3Inh L3 5 VIP IGDCC3 unknown unknown brain None None unknown None EREG NOX4Inh L3 5 VIP TAC3 unknown unknown brain None None unknown None COL19A1 SOX2 OT TSHZ2Inh L3 6 PAX6 LINC01497 unknown unknown brain None None unknown None PALMD RELNInh L3 6 VIP UG0898H09 unknown unknown brain None None unknown None GALNT10 LINC01411 LOC105373454Inh L3 6 VIP ZIM2 AS1 unknown unknown brain None None unknown None CXCL14 PENKInh L5 PVALB LRIG3 unknown unknown brain None None unknown None CDH6 GPC5 PLCE1Inh L5 SST RPL35AP11 unknown unknown brain None None unknown None EDNRA FREM1 TRHDEInh L5 6 LAMP5 CRABP1 unknown unknown brain None None unknown None LOC105379168 PDGFDInh L5 6 PVALB FAM150B unknown unknown brain None None unknown None ALKAL2 MYBPC1 TNCInh L5 6 PVALB GAPDHP60 unknown unknown brain None None unknown None GPC5 MYBPC1 SEMA3CInh L5 6 PVALB KCNIP2 unknown unknown brain None None unknown None GPC5 NPFFR2 VAV3Inh L5 6 PVALB MEPE unknown unknown brain None None unknown None MEPE MYBPC1 SVILInh L5 6 PVALB SST CRHR2 unknown unknown brain None None unknown None HPGD RGS5 SPON1Inh L5 6 PVALB ZFPM2 AS1 unknown unknown brain None None unknown None PCDH15 SEMA6D ZFPM2 AS1Inh L5 6 SST BEAN1 unknown unknown brain None None unknown None ADAMTSL1 SEMA5A THSD7B TRHDEInh L5 6 SST C4orf26 unknown unknown brain None None unknown None ADAMTS20 PENK SPON1Inh L5 6 SST DNAJC14 unknown unknown brain None None unknown None HGF ITGA1 STON2Inh L5 6 SST FBN2 unknown unknown brain None None unknown None HCRTR2 KLHL1Inh L5 6 SST ISX unknown unknown brain None None unknown None COL19A1 TRPM3Inh L5 6 SST KLHL1 unknown unknown brain None None unknown None KLHL14 NDST4 SLC17A8Inh L5 6 SST PAWR unknown unknown brain None None unknown None EPB41L4A NDST4 TRHDEInh L5 6 SST PIK3CD unknown unknown brain None None unknown None KLHL14 LOC100996671Inh L5 6 VIP COL4A3 unknown unknown brain None None unknown None ABI3BP KCTD12 PARD3BInh L6 SST TH unknown unknown brain None None unknown None LOC100128108 THInterstitial macrophage unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A SIGLEC1 MRC1 CD163 STAB1 ITGAM IGSF21 FOLR2L5ET 113 unknown unknown brain None None unknown None LINC02424 LINC00943L5ET 114 unknown unknown brain None None unknown None LINC00326 RP11 370K2 1 CTB 57H20 1L5ET 115 unknown unknown brain None None unknown None XIST CSN1S1L5ET 117 unknown unknown brain None None unknown None GABRQ LRP2 RP11 622O11 6L5ET 118 unknown unknown brain None None unknown None CSN1S1 LRP2 RP4 678D15 1LLC 264 unknown unknown brain None None unknown None COL15A1 CRH RP11 238K6 2LLC 265 unknown unknown brain None None unknown None PTHLH RP11 238K6 2LLC 266 unknown unknown brain None None unknown None C1QL1 UNC5B GRIN2CLLC 267 unknown unknown brain None None unknown None DDR2 MET CHST9LLC 268 unknown unknown brain None None unknown None TACR1 EYA4 CHST9 CMTM8LLC 269 unknown unknown brain None None unknown None IFI44 ISM1 CHST9LLC 270 unknown unknown brain None None unknown None NOS1 TAC1 ADAMTS9 AS2 PREX2 ARHGAP6LLC 271 unknown unknown brain None None unknown None ADGRG6 SFRP1 RP11 563D10 1LLC 272 unknown unknown brain None None unknown None FREM2 SFRP1 PDGFD LAMP5LLC 273 unknown unknown brain None None unknown None LRP2 FBN2 CHST9 RP11 563D10 1LLC 274 unknown unknown brain None None unknown None NFIA AS2 FBN2 CTC 806A22 1LLC 275 unknown unknown brain None None unknown None SFRP1 PDGFD CA2 CXCL14LRL 315 unknown unknown brain None None unknown None TENT5A MME SMOC1LRL 316 unknown unknown brain None None unknown None ADAMTS20 EYA2 BTNL9LRL 317 unknown unknown brain None None unknown None BMP5 LINC00836 RP11 46H14 1 RP11 321P16 3LRL 318 unknown unknown brain None None unknown None LINC00836 CTXN3 RP11 46H14 1LRL 319 unknown unknown brain None None unknown None LINC00355 FAM114A1LRL 320 unknown unknown brain None None unknown None TINAG SYT10 THSD7BLRL 321 unknown unknown brain None None unknown None ADGRL4 VEPH1 LINC01798 RP11 649A16 1LRL 322 unknown unknown brain None None unknown None LINC01982 SLC5A7Lymphatic Endothelial Cell unknown unknown lymph node None None unknown None CD209 CLEC4G CLEC4M LYVE1 MARCOLymphatic Endothelial Cell unknown unknown lymph node None None unknown None ACKR4 CAV1 NUDT4 NT5ELymphatic Endothelial Cell Subcapsular Sinus Ceiling unknown unknown lymph node None None unknown None ACKR4 CAV1 NUDT4 NT5ELymphatic Endothelial Cell of Medulla Ceiling unknown unknown lymph node None None unknown None ACKR4 LYVE1 MFAP4 NT5ELymphatic Endothelial Cell Subcapsular Sinus Floor unknown unknown lymph node None None unknown None CCL20 CXCL1 CXCL5 DARC LYZ MARCO TNFRSF9 THY1Lymphatic Endothelial Cell Trabeculae unknown unknown lymph node None None unknown None ACKR4 LYVE1 MFAP4 NT5EMGE 236 unknown unknown brain None None unknown None PRTG MYO5B TAC1MGE 239 unknown unknown brain None None unknown None PIEZO2 HPSE2 RP11 656G20 1MGE 240 unknown unknown brain None None unknown None FBN2 TAFA4 SYT10 RP11 656G20 1MGE 241 unknown unknown brain None None unknown None BMP6 SOX6 ANKRD30B RP11 656G20 1MGE 242 unknown unknown brain None None unknown None MCUB FBN2 MME SOX6 ADAMTSL1MGE 243 unknown unknown brain None None unknown None PENK CALB1 EYA4 CTD 2533K21 4MGE 244 unknown unknown brain None None unknown None NPY TAC3 CBLN4MGE 245 unknown unknown brain None None unknown None NPY FBN2 RP11 656G20 1MGE 246 unknown unknown brain None None unknown None SST LINC02008 MAFMGE 247 unknown unknown brain None None unknown None LPAR1 COL5A2 CTD 2288O8 3MGE 248 unknown unknown brain None None unknown None DCN TAC1 RP11 799O21 2MGE 249 unknown unknown brain None None unknown None TRPC7 SST RSPO3 SOX6 SEMA3AMGE 250 unknown unknown brain None None unknown None PROM1 ADGRG6 ADAMTS9 AS2MGE 251 unknown unknown brain None None unknown None SST ADGRG6 RELN RP11 387P12 1MGE 252 unknown unknown brain None None unknown None EDNRA TAC3 ABC10 43608400O15 1MGE 253 unknown unknown brain None None unknown None SST VCAN TRPC6 CTC 535M15 2 CTC 340A15 2MGE 254 unknown unknown brain None None unknown None ADAMTS20 NPAS1 FBN2MGE 255 unknown unknown brain None None unknown None HGF BCHE RP11 238K6 2MGE 256 unknown unknown brain None None unknown None MYBPC1 SHISA8 ADAMTS17MGE 257 unknown unknown brain None None unknown None MEPE RGS5 ENSG00000143248MGE 258 unknown unknown brain None None unknown None WNT16 SST PAWRMGE 259 unknown unknown brain None None unknown None ANOS1 RGS5 ENSG00000143248 BTBD11MGE 260 unknown unknown brain None None unknown None IQGAP2 TAFA4 CTXND1MGE 261 unknown unknown brain None None unknown None ADAMTS17 PVALB CEMIP AC133680 1MGE 262 unknown unknown brain None None unknown None PIEZO2 SULF1 ADAMTS9 AS2 RP1 35C21 2MGE 263 unknown unknown brain None None unknown None SULF1 PVALB AC133680 1 RP11 875G18 1MSN 206 unknown unknown brain None None unknown None GLI3 EBF1 AC002066 1 RP11 640F22 1MSN 207 unknown unknown brain None None unknown None DRD2 MME LINC01378MSN 208 unknown unknown brain None None unknown None PENK SH3RF2 RP1 71H24 1MSN 209 unknown unknown brain None None unknown None LINC02137 SH3RF2 DRD1 RP11 358P11 1MSN 210 unknown unknown brain None None unknown None LINC02137 LINC02822 RP11 286O1 1MSN 211 unknown unknown brain None None unknown None DRD1 PTPRQ RP11 640F22 1MSN 212 unknown unknown brain None None unknown None PENK RP11 358P11 1 RP5 1180C18 1MSN 213 unknown unknown brain None None unknown None LINC00534 PENKMSN 214 unknown unknown brain None None unknown None DRD1 LINC01117 STACMSN 215 unknown unknown brain None None unknown None DRD1 RP11 829H16 3 RP11 875G18 1MSN 216 unknown unknown brain None None unknown None DRD2 PENK EYA2 RP11 97F8 2 CTC 340A15 2MSN 217 unknown unknown brain None None unknown None DCDC2C PENKMSN 218 unknown unknown brain None None unknown None DRD3 MME RP11 142I20 2MSN 219 unknown unknown brain None None unknown None ISL1 CXCL14 FOXP2MSN 220 unknown unknown brain None None unknown None ISL1 MKX PCSK6MSN 221 unknown unknown brain None None unknown None DRD2 RP11 111G13 1 CTC 535M15 2MSN 427 unknown unknown brain None None unknown None ISL1 GABRG1 CTC 552D5 1MSN 430 unknown unknown brain None None unknown None PENK GABRG1Macrophage unknown unknown lymph node None None unknown None CD4 CD14 HLA DRA ITGAXMarginal Reticular Cell unknown unknown lymph node None None unknown None CXCL13 ENPP2 TNFSF11Mast Cell unknown unknown lymph node None None unknown None KIT MS4A2 TPSAB1 TPSB2Mast Cell unknown unknown lymph node None None unknown None KIT TPSB2 TPSAB1 MS4A2Medial Excitatory Neuron 1 unknown unknown spinal cord None None unknown None ZFHX3 TAC1 LMX1BMedial Excitatory Neuron 2 unknown unknown spinal cord None None unknown None NFIX SATB2 TAC3Medial Excitatory Neuron 3 unknown unknown spinal cord None None unknown None NFIX PRDM8 CDH23Medial Excitatory Neuron 4 unknown unknown spinal cord None None unknown None ZFHX3 ISL1Medial Inhibitory Neuron 1 unknown unknown spinal cord None None unknown None GAD2 TFAP2BMedullary Reticular Cell unknown unknown lymph node None None unknown None CXCL12 TNFSF11Megakaryocyte unknown unknown Bone marrow None None unknown None GP9 CAVIN2 PPBP LAT PF4 CLEC1B ITGA2BMemory B Cell unknown unknown lymph node None None unknown None CD19 MS4A1 HLA DRAMemory CD4 T cell unknown unknown lymph node None None unknown None CD3D CXCR6 ITGA1Memory CD8 T cell unknown unknown lymph node None None unknown None CD3D CD8A CXCR6 ITGA1Merkel unknown unknown large intestine None None unknown None keratin 20 chromogranin A synaptophysinMgl 10 unknown unknown brain None None unknown None LNCAROD P2RY12 DOCK8Mgl 11 unknown unknown brain None None unknown None LINC02642 LINC02712 P2RY12Mgl 12 unknown unknown brain None None unknown None MRC1 F13A1Mgl 4 unknown unknown brain None None unknown None HIF1A AS3 SRGNMgl 5 unknown unknown brain None None unknown None APBB1IP TTRMgl 6 unknown unknown brain None None unknown None ITGAX SCIN LINC00278Mgl 7 unknown unknown brain None None unknown None OLR1 CX3CR1 LINC02712Mgl 8 unknown unknown brain None None unknown None CCDC26 LNCAROD CX3CR1Mgl 9 unknown unknown brain None None unknown None AIF1 CX3CR1 LINC02712Micro L1 6 TYROBP CD74 unknown unknown brain None None unknown None APBB1IP P2RY12Microglia unknown unknown spinal cord None None unknown None AIF1Midi 433 unknown unknown brain None None unknown None OTX2 AS1 PRSS12 HHIP RELNMidi 434 unknown unknown brain None None unknown None CTXN3 NPPC NPSR1 AS1Midi 435 unknown unknown brain None None unknown None NPSR1 TRPC7 LTBP1 NR2F2 AS1Midi 436 unknown unknown brain None None unknown None HMCN1 OTX2 AS1 BMPR1BMidi 437 unknown unknown brain None None unknown None OTX2 AS1 BMPR1B RORB CH17 174L20 1Midi 438 unknown unknown brain None None unknown None NPSR1 NPPC AC010091 1Midi 439 unknown unknown brain None None unknown None OTX2 AS1 LINC02055 PRSS12 SEMA3CMidi 440 unknown unknown brain None None unknown None MYO3B OTX2 AS1 LINC02055Midi 441 unknown unknown brain None None unknown None MYO3B PLEKHH2 CRNDEMidi 442 unknown unknown brain None None unknown None TSPAN12 CASR NPSR1Midi 443 unknown unknown brain None None unknown None VASH2 NPPC LINC02552 OTX2 AS1Midi 444 unknown unknown brain None None unknown None PLEKHH2 OTX2 AS1 LINC02552 SEMA3C SYT2Misc 116 unknown unknown brain None None unknown None ERG PCSK6 ATP10A FAM160A1Misc 132 unknown unknown brain None None unknown None CD53 ETS1 RORBMisc 164 unknown unknown brain None None unknown None LINC01482 LINC02653 LINC01885 RP11 369E15 3Misc 165 unknown unknown brain None None unknown None LINC02752 RP11 60A8 1Misc 166 unknown unknown brain None None unknown None C10orf90 RP11 537P24 1Misc 167 unknown unknown brain None None unknown None ANO2 TRPC6 TSHZ2 RP4 678D15 1Misc 168 unknown unknown brain None None unknown None SCHLAP1 DCNMisc 170 unknown unknown brain None None unknown None DCN GRB14Misc 176 unknown unknown brain None None unknown None CARM1P1 FREM2 COBLL1 RP11 719N9 1Misc 177 unknown unknown brain None None unknown None VIPR2 CALCRL COBLL1 RP11 719N9 1 CTC 535M15 2Misc 178 unknown unknown brain None None unknown None RP11 370B11 4 RP11 719N9 1 CTC 535M15 2 CTC 340A15 2Misc 314 unknown unknown brain None None unknown None PCP2Misc 401 unknown unknown brain None None unknown None SOX11 CCBE1 NR2F2 AS1Misc 404 unknown unknown brain None None unknown None LINC02306 LINC02263 AC011288 2Mmb 323 unknown unknown brain None None unknown None TAC1 RP11 284G10 1 RP3 401D24 1Mmb 324 unknown unknown brain None None unknown None LINC00410 RBMS3 AS2 TAC1Mmb 325 unknown unknown brain None None unknown None FSHR LINC00410 RP11 460M2 1 RP3 401D24 1Mmb 326 unknown unknown brain None None unknown None SIM1 PITX2 CRHBP RP3 401D24 1Mmb 327 unknown unknown brain None None unknown None LINC00410 TAFA4 RP3 401D24 1Mmb 328 unknown unknown brain None None unknown None LINC00410 CFAP299Mmb 329 unknown unknown brain None None unknown None SIM1 LINC02196 PRLR FBXL7Mmb 330 unknown unknown brain None None unknown None PITX2 NTNG1 RP3 401D24 1Mmb 331 unknown unknown brain None None unknown None PITX2 SEMA3C RP11 115D10 1Mmb 332 unknown unknown brain None None unknown None SIM1 FRMPD2 ONECUT2 MYO1BMmb 333 unknown unknown brain None None unknown None SIM1 CD36 LTBP1Mono 3 unknown unknown brain None None unknown None FCN1Monocyte Derived Cell unknown unknown kidney None None unknown None MSR1 ITGAX HLA DQA1 HLA DRB1 CSF2RA CD14 TRPM2Monocytoid B Cell unknown unknown lymph node None None unknown None AICDA CD19 IGHMMyeloid progenitor unknown unknown Bone marrow None None unknown None SPI1 IRF8 CEBPB KLF4Myofibroblast unknown unknown lymph node None None unknown None ACTA2 COL1A1 COL3A1NK CD56bright unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A IL7R SPTSSB XCL1 XCL2 CD56NK cell unknown unknown large intestine None None unknown None CD56 CD57 CD11c NKG2DNaive B Cell unknown unknown lymph node None None unknown None CD19 MS4A1 IGHD FCER2 HLA DRA SELLNaive CD4 T cell unknown unknown lymph node None None unknown None CD3D CCR7 SELLNaive CD8 T cell unknown unknown lymph node None None unknown None CD3D CD8A CCR7 SELLNatural Killer Cell unknown unknown lymph node None None unknown None ID2 KLRD1Nkcell 2 unknown unknown brain None None unknown None GNLY NKG7OPC L1 6 PDGFRA COL20A1 unknown unknown brain None None unknown None FAM222A KIF25 TGFAOPC 32 unknown unknown brain None None unknown None MROH9 RP1 45C12 1OPC 33 unknown unknown brain None None unknown None OLIG1 APOD RP1 45C12 1OPC 34 unknown unknown brain None None unknown None OLIG1 RP4 668E10 4 RP11 197H3 1OPC 35 unknown unknown brain None None unknown None OLIG1 MIR3681HG RP4 668E10 4OPC 36 unknown unknown brain None None unknown None LINC01608 RP4 668E10 4Oligo L2 6 OPALIN FTH1P3 unknown unknown brain None None unknown None STK32A VCANOligo L2 6 OPALIN MAP6D1 unknown unknown brain None None unknown None ENPP2 LOC101927459Oligo L3 6 OPALIN ENPP6 unknown unknown brain None None unknown None ENPP2 LINC01378 MBP ST18Oligo L5 6 OPALIN LDLRAP1 unknown unknown brain None None unknown None LOC105376917 OPALIN OBI1 AS1Oligo 40 unknown unknown brain None None unknown None OPALIN PLP1 ERBB4Oligo 44 unknown unknown brain None None unknown None SLC5A11 ANLN CARNS1 TF MOBPOligo 45 unknown unknown brain None None unknown None SLC5A11 OPALIN MOBP CERCAMOligo 46 unknown unknown brain None None unknown None LINC01608 RNASE1 CNDP1Oligo 47 unknown unknown brain None None unknown None OPALIN LINC01608 PLP1Oligo 48 unknown unknown brain None None unknown None OPALIN RP11 38B6 1Oligo 49 unknown unknown brain None None unknown None SLC5A11 CARNS1 TF CRYAB AC084149 2Oligo 50 unknown unknown brain None None unknown None PTCSC3 SLC5A11Oligodendrocyte unknown unknown spinal cord None None unknown None MOGOligodendrocyte Precursor Cell unknown unknown spinal cord None None unknown None BEST3Paneth unknown unknown large intestine None None unknown None DEFA5Paneth unknown unknown large intestine None None unknown None defensin alpha 5Paneth cell unknown unknown Small Intestine None None unknown None LYZ DEFA5Per 21 unknown unknown brain None None unknown None NDUFA4L2 RERGLPer 22 unknown unknown brain None None unknown None CARMN SLC19A1Per 23 unknown unknown brain None None unknown None ASPN SLC6A12 SLC6A13Pericyte unknown unknown lymph node None None unknown None PDGFRalpha PDGFRbeta Plasma Cell unknown unknown lymph node None None unknown None CD38 IRF4 PRDM1 SDC1Plasmablast unknown unknown lymph node None None unknown None CD38 IRF4 PRDM1 SDC1Plasmacytoid Dendritic Cell unknown unknown Bone marrow None None unknown None GZMB JCHAIN SERPINF1Plasmacytoid Dendritic Cell unknown unknown lymph node None None unknown None IL3RA CLEC4C GZMB IGJPlasmacytoid Dendritic Cell pDC unknown unknown Blood None None unknown None GZMB JCHAIN SERPINF1Prefibrocartilage Chondrocyte unknown unknown knee None None unknown None PRG4 COL2A1 CTHRC1Prehypertrophic Chondrocyte unknown unknown knee None None unknown None FST C11orf96 INHBARegulatory Chondrocyte 1 unknown unknown knee None None unknown None ANGPTL4 CHI3L1 CHI3L2Regulatory Chondrocyte 2 unknown unknown knee None None unknown None MT1G MT1E MT1HReparative Chondrocyte unknown unknown knee None None unknown None CILP LOX ACANSOX9 epithelial cell unknown unknown Uterus None None unknown None EPCAM SOX9 MMP7Smooth Muscle Cell unknown unknown lymph node None None unknown None ACTA2Splat 235 unknown unknown brain None None unknown None NPY NOS1Splat 237 unknown unknown brain None None unknown None BCHE PDGFD CMTM8Splat 238 unknown unknown brain None None unknown None ST18 IL1RAPL2Splat 313 unknown unknown brain None None unknown None LINC02770 RP11 410K21 2Splat 334 unknown unknown brain None None unknown None GNG8 POU4F1Splat 335 unknown unknown brain None None unknown None HSPD1P8 AC003099 2Splat 336 unknown unknown brain None None unknown None FAM83B ONECUT1Splat 337 unknown unknown brain None None unknown None ONECUT1 C5orf64 TAFA4Splat 338 unknown unknown brain None None unknown None HOXD3 FSHR RP11 354K4 2Splat 339 unknown unknown brain None None unknown None SLC6A5 LINC01798 MEIS1Splat 340 unknown unknown brain None None unknown None ONECUT1 LHX9 LINC01798Splat 341 unknown unknown brain None None unknown None LINC01036 EBF2 EBF3Splat 342 unknown unknown brain None None unknown None LINC01036 LINC02306Splat 343 unknown unknown brain None None unknown None CASZ1 EBF2 HOXB3Splat 344 unknown unknown brain None None unknown None EBF3 DOCK8 AC067959 1Splat 345 unknown unknown brain None None unknown None LMX1B HOXB3 RP11 221G19 1Splat 346 unknown unknown brain None None unknown None ITGA11 LMX1BSplat 347 unknown unknown brain None None unknown None PAX2 HOXB3 EBF3Splat 348 unknown unknown brain None None unknown None HOXD3 SALL3Splat 349 unknown unknown brain None None unknown None HOXD3 TSPAN18 AC079135 1Splat 350 unknown unknown brain None None unknown None SLC6A5 TTR ADAMTSL1 HTR2CSplat 351 unknown unknown brain None None unknown None LINC00261 OTX2 AS1Splat 352 unknown unknown brain None None unknown None LINC01210 LHX1 EBF3 GATA3Splat 353 unknown unknown brain None None unknown None HPGD GATA3 CTC 535M15 2Splat 354 unknown unknown brain None None unknown None LHX1 TCF7L2 RP11 66G15 1Splat 355 unknown unknown brain None None unknown None KIZ AS1 GATA3 ZFPM2 AS1 TRHDESplat 356 unknown unknown brain None None unknown None GATA3 SATB1 AS1 CTC 535M15 2Splat 357 unknown unknown brain None None unknown None EMX2 TFAP2B LEF1Splat 358 unknown unknown brain None None unknown None TFAP2B GATA3 GRIK1 ZFHX3 TAFA1Splat 359 unknown unknown brain None None unknown None TFAP2B OTX2 AS1 LEF1Splat 360 unknown unknown brain None None unknown None OTX2 LEF1 NDST4Splat 361 unknown unknown brain None None unknown None GATA3 SIX3 TAC1Splat 362 unknown unknown brain None None unknown None PREX2 PTPRK FSTL5 LUZP2Splat 363 unknown unknown brain None None unknown None EBF2 ST8SIA6 NR2F2 AS1Splat 364 unknown unknown brain None None unknown None TFAP2D NDST4 CTC 340A15 2Splat 365 unknown unknown brain None None unknown None HTR2C ZFHX3 MEIS2 GNAS CALM1 CNTN1Splat 366 unknown unknown brain None None unknown None EBF3 KLHL1 DACH1 TCF7L2Splat 367 unknown unknown brain None None unknown None TAC1 PRLR TCF7L2Splat 368 unknown unknown brain None None unknown None EBF3 EBF1 TCF7L2 SNHG14Splat 369 unknown unknown brain None None unknown None TFAP2B LHX9 RP4 678D15 1Splat 370 unknown unknown brain None None unknown None EBF2 LGR5 EBF3 LEF1Splat 371 unknown unknown brain None None unknown None CPA6 NPSR1 BNC2Splat 373 unknown unknown brain None None unknown None SHOX2 PDGFD LHX2 TCF7L2Splat 374 unknown unknown brain None None unknown None TFAP2B LMX1ASplat 375 unknown unknown brain None None unknown None POU4F1 CRNDE CBLN2Splat 376 unknown unknown brain None None unknown None ZFHX3 RP11 491F9 1Splat 377 unknown unknown brain None None unknown None LHX1 DIRAS3 ZIC2Splat 378 unknown unknown brain None None unknown None ONECUT1 ISL1Splat 379 unknown unknown brain None None unknown None OTP SLC6A5 EBF2Splat 380 unknown unknown brain None None unknown None SLC6A5 EBF3 NXPH2 HTR2CSplat 381 unknown unknown brain None None unknown None OTP EBF2 EBF1Splat 382 unknown unknown brain None None unknown None SST RSPO3 TCF7L2Splat 383 unknown unknown brain None None unknown None EBF2 LMX1A PITX2Splat 384 unknown unknown brain None None unknown None CDH23 PITX2 LMX1ASplat 385 unknown unknown brain None None unknown None AR LMX1ASplat 386 unknown unknown brain None None unknown None TACR3 HOXB3 NR4A2Splat 387 unknown unknown brain None None unknown None PAX5 EBF2Splat 388 unknown unknown brain None None unknown None LINC01798 LAMA1 NPFFR2Splat 389 unknown unknown brain None None unknown None GATA3 DACH1 FIGNSplat 390 unknown unknown brain None None unknown None POU6F2 ZIC1 NRXN3 SNHG14Splat 391 unknown unknown brain None None unknown None PDGFD ST18 CDH12 CTC 535M15 2 CTC 340A15 2Splat 392 unknown unknown brain None None unknown None FGF10 LHX6Splat 393 unknown unknown brain None None unknown None ISL1 SIX3 RNF220Splat 394 unknown unknown brain None None unknown None LINC01798 LHX9 NPNTSplat 395 unknown unknown brain None None unknown None SLC6A3Splat 396 unknown unknown brain None None unknown None LMX1B GATA3 SEMA3DSplat 397 unknown unknown brain None None unknown None SLC6A4 TPH2Splat 398 unknown unknown brain None None unknown None PHOX2B CRNDESplat 399 unknown unknown brain None None unknown None TFAP2B RNF220 MEIS2Splat 400 unknown unknown brain None None unknown None LHX8 SLC5A7Splat 402 unknown unknown brain None None unknown None LMNTD1 SST LINC02822Splat 403 unknown unknown brain None None unknown None FRMD7 PCBP3Splat 409 unknown unknown brain None None unknown None GLP1R TAC3 ST18Splat 410 unknown unknown brain None None unknown None AVPSplat 411 unknown unknown brain None None unknown None PPP1R17 RORB PDE3ASplat 412 unknown unknown brain None None unknown None ISL1 LEF1 RP11 964E11 3Splat 413 unknown unknown brain None None unknown None SIM1 PITX2 CTC 340A15 2Splat 414 unknown unknown brain None None unknown None OTP SIM1 RP11 964E11 3Splat 415 unknown unknown brain None None unknown None PEG10 GNASSplat 416 unknown unknown brain None None unknown None HMX3 ISL1 DIRAS3Splat 417 unknown unknown brain None None unknown None DLK1 OTP ISL1Splat 418 unknown unknown brain None None unknown None FEZF1 RP11 964E11 3Splat 420 unknown unknown brain None None unknown None OTP ZIC1 CTC 552D5 1Splat 421 unknown unknown brain None None unknown None ESR1 STK32BSplat 422 unknown unknown brain None None unknown None TMEM255A LHX6 PEG10 ADARB2Splat 423 unknown unknown brain None None unknown None PROX1 SOX6 TSHZ2Splat 424 unknown unknown brain None None unknown None CYP19A1 LHX6 NR2F2 ZBTB7CSplat 425 unknown unknown brain None None unknown None ESR1 LHX6 NR2F2 AS1 SATB1 AS1Splat 428 unknown unknown brain None None unknown None FREM2 STK32B RP11 649A16 1Splat 429 unknown unknown brain None None unknown None FREM2 PRDM16 MYO5BSplat 431 unknown unknown brain None None unknown None PGR TBX3Splat 432 unknown unknown brain None None unknown None HDCSympathetic Neuron unknown unknown lymph node None None unknown None NCAM1 UCHL1T Cell unknown unknown lymph node None None unknown None CD3D CD4T Cell unknown unknown lymph node None None unknown None CD3D CD8AT Cell Zone Reticular Cell unknown unknown lymph node None None unknown None CCL19 CCL21 IL7T Cytotoxic Cell unknown unknown lymph node None None unknown None CD3D CD8A GZMB GZMKT Follicular Helper Cell unknown unknown lymph node None None unknown None CD3D CD4 CXCR5 MAF PDCD1T Follicular Regulatory Cell unknown unknown lymph node None None unknown None CD3D CD4 CXCR5 FOXP3 IL2RAT Regulatory Cell unknown unknown lymph node None None unknown None FOXP3 IL2RA CTLA4T cell unknown unknown Uterus None None unknown None CD69 HMGB2 CD3G IL7R CXCR4 CCL5T follicular helper cell unknown unknown thoracic thymus None None unknown None ALG13 CCNH DDIT4 EIF4A3 FAM177A1 FLT3LG FOSB IL7R NDUFV2 NR4A2T helper unknown unknown large intestine None None unknown None CD3 CD4T helper unknown unknown large intestine None None unknown None CD3 CD8T killer unknown unknown large intestine None None unknown None CD3 CD8T killer unknown unknown large intestine None None unknown None CD3 CD4 FOXP3T reg unknown unknown large intestine None None unknown None CD3 CD4 FOXP3T reg unknown unknown large intestine None None unknown None CD19 CD79aT regulatory unknown unknown Blood None None unknown None TRAC TRBC1 IL7R TRAT1 LTB AQP3 FOXP3 TNFRSF25 TIGIT CCR6 TNFRSF4T regulatory unknown unknown Bone marrow None None unknown None TRAC TRBC1 IL7R TRAT1 LTB AQP3 FOXP3 TNFRSF25 TIGIT CCR6 TNFRSF4TBet low Liver NK cell unknown unknown liver None None unknown None TBX21 eomesTcell 1 unknown unknown brain None None unknown None CD2 THEMISTh1 cell unknown unknown lymph node None None unknown None CD3D IL7R ID2Th17 cell unknown unknown lymph node None None unknown None CD3D CCR6 IL7R ID2Th17 cell unknown unknown thoracic thymus None None unknown None ANXA1 CARHSP1 CD40LG IL7R KLRB1 NOSIP PLAC8 SORL1 ZBTB16Th2 cell unknown unknown lymph node None None unknown None CD3D IL7R ID2Thex 372 unknown unknown brain None None unknown None FAM9B PTH2R RNF220 TCF7L2Thex 445 unknown unknown brain None None unknown None MAP3K20 KCNH8 RP11 354K4 2Thex 446 unknown unknown brain None None unknown None DCDC2C RP11 354K4 2Thex 447 unknown unknown brain None None unknown None LINC01695 ST8SIA6 TGFBR2 KCNH8Thex 448 unknown unknown brain None None unknown None NDRG1 ETV1Thex 449 unknown unknown brain None None unknown None CASQ2 NTS EDNRBThex 450 unknown unknown brain None None unknown None CASQ2 ADAMTS12 AC092684 1Thex 451 unknown unknown brain None None unknown None CASQ2 CD226 AC092684 1Thex 452 unknown unknown brain None None unknown None ITM2A HPSE2 PVALBThex 453 unknown unknown brain None None unknown None CARTPT RGS16 PNOCThex 454 unknown unknown brain None None unknown None TAFA4 AP000331 1Thex 455 unknown unknown brain None None unknown None LINC01151 FSHRThex 456 unknown unknown brain None None unknown None LINC02296 ST8SIA6 BMP6 TCF7L2Thex 457 unknown unknown brain None None unknown None LINC01036 FAM163AThex 458 unknown unknown brain None None unknown None NTS RGS16 LINC01320Thex 459 unknown unknown brain None None unknown None SLITRK6 MCUB RNF220Thex 460 unknown unknown brain None None unknown None DMRTA1 LINC01239Tingible Body Macrophage unknown unknown lymph node None None unknown None CD4 CD14 HLA DRA ITGAXTransitional principal intercalated cell unknown unknown kidney None None unknown None FXYD4 SLC4A9 SLC26A7ULIT 120 unknown unknown brain None None unknown None GLP2R LINC01378 TRPC6 SEMA3CULIT 121 unknown unknown brain None None unknown None TTC6 LAMP5 ANKRD20A11P AC011288 2 RP4 809F18 1ULIT 122 unknown unknown brain None None unknown None LINC01500 LINC00507 PDGFDULIT 123 unknown unknown brain None None unknown None LINC02306 LINC02263 PDGFD RP11 191L9 4ULIT 124 unknown unknown brain None None unknown None LINC00508 LINC02306 RP11 380P13 1 RP11 335E8 3ULIT 125 unknown unknown brain None None unknown None LINC02306 LINC01331 CYP1B1 AS1 RP11 335E8 3ULIT 126 unknown unknown brain None None unknown None RP11 120L14 1 RP11 632B21 2 AJ006998 2ULIT 127 unknown unknown brain None None unknown None CARM1P1 RP11 120L14 1 AJ006998 2ULIT 128 unknown unknown brain None None unknown None LAMA2 COL5A2 LINC02055 RP11 387P12 1ULIT 129 unknown unknown brain None None unknown None LINC00326 LINC02296 CTD 2050E21 1ULIT 130 unknown unknown brain None None unknown None LINC02296 COL5A2 RP11 370K2 1 RP11 191L9 4ULIT 131 unknown unknown brain None None unknown None LINC02306 AC067959 1 RP11 191L9 4ULIT 133 unknown unknown brain None None unknown None RORB ADAMTS17 POU6F2 TRPC3ULIT 134 unknown unknown brain None None unknown None VIPR2 RP11 484I6 9 CTB 57H20 1ULIT 135 unknown unknown brain None None unknown None COL22A1 RP11 197K6 1 CTD 2058B24 2ULIT 138 unknown unknown brain None None unknown None LINC02306 RP11 404H1 1 RP11 320L2 1URL 297 unknown unknown brain None None unknown None RBP3URL 308 unknown unknown brain None None unknown None EOMES RP11 312A15 5URL 309 unknown unknown brain None None unknown None ABCA13 RP11 340A13 4URL 310 unknown unknown brain None None unknown None RELN RP11 81F8 1 RP11 97F8 2 RP11 649A16 1URL 311 unknown unknown brain None None unknown None ETV1 RP11 81F8 1 RP11 649A16 1URL 312 unknown unknown brain None None unknown None TTR RP11 81F8 1 RP5 1101C3 1VLMC L1 5 PDGFRA COLEC12 unknown unknown brain None None unknown None COL1A2 COLEC12VendAC 14 unknown unknown brain None None unknown None SEMA3G HERC2P3VendA 18 unknown unknown brain None None unknown None MGP MECOMVendC 15 unknown unknown brain None None unknown None HMCN1 ABCG2 MECOMVendPLVAP 13 unknown unknown brain None None unknown None PLVAPVendVC 16 unknown unknown brain None None unknown None TRPM6 MECOMVendV 17 unknown unknown brain None None unknown None IL1R1 SRGNVentral Excitatory Neuron 1 unknown unknown spinal cord None None unknown None ZFHX3 POU6F2 ONECUT2Ventral Excitatory Neuron 2 unknown unknown spinal cord None None unknown None ZFHX3 FOXP2 RNF220Ventral Excitatory Neuron 3 unknown unknown spinal cord None None unknown None ZFHX3 CDH9 NR4A2Ventral Inhibitory Neuron 1 unknown unknown spinal cord None None unknown None NFIX PROX1Ventral Inhibitory Neuron 2 unknown unknown spinal cord None None unknown None ZFHX3 FOXP2 GATA3Ventral Inhibitory Neuron 3 unknown unknown spinal cord None None unknown None ZFHX3 ASAH2 GAS1RRVsmc 19 unknown unknown brain None None unknown None ACTA2 MECOMVsmc 20 unknown unknown brain None None unknown None ACTA2 TAGLNabsorptive unknown unknown large intestine None None unknown None keratin 20 BEST4absorptive unknown unknown Small Intestine None None unknown None CA2 SIadipocyte unknown unknown large intestine None None unknown None S100adult endothelial progenitor cell unknown unknown respiratory system None None unknown None KIT APLNRadventitial fibroblast unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 COL6A3 FBLN1 LUM MFAP5 SCARA5 DCLK1adventitial fibroblast unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 COL6A3 FBLN1 LUM MFAP5 PI16 PLA2G2A SLPI SCARA5 DCLK1airway deuterosomal cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 DEUP1 FOXN4 CDC20B TYMS FOXJ1airway deuterosomal cell unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 DEUP1 FOXN4 CDC20B TYMS FOXJ1airway submucosal gland ciliated duct cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 FOXJ1 TUBA1A DYNLRB2 TUBB4B RSPH1airway submucosal gland ciliated duct cells unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 FOXJ1 TUBA1A DYNLRB2 TUBB4B RSPH1airway submucosal gland collecting duct epithelial cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 PLUNC MIA ALDH1A3 RARRES1airway submucosal gland collecting duct epithelial cell unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 BPIFA1 MIA ALDH1A3 RARRES1airway submucosal gland collecting duct epithelial cell unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 PLUNC MIA ALDH1A3 RARRES1airway submucosal gland duct basal cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 FOXC1 KRT14 CTNNB1airway submucosal gland duct basal cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 NGFR KRT14 CTNNB1airway submucosal gland duct basal cell unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 FOXC1 KRT14 CTNNB1airway submucosal gland duct basal cell unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 FOXC1 KRT14 CTNNB1airway submucosal gland duct ciliated cell unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 FOXJ1 DYNLRB2 RSPH1alveolar macrophage unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A SIGLEC1 MRC1 CD163 FABP4 MARCO CYP27A1 PPARGalveolar macrophage CCL3 unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A SIGLEC1 MRC1 CD163 CCL3 FABP4 MARCO CYP27A1 PPARGalveolar macrophage MT positive unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A SIGLEC1 MRC1 CD163 MT1E FABP4 MARCO CYP27A1 PPARGalveolar macrophage proliferating unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A SIGLEC1 MRC1 CD163 CDK1 FABP4 MARCO CYP27A1 PPARGalveolar type 1 fibroblast cell unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 COL6A3 FBLN1 LUM WNT2 TCF21 FGFR4alveolar type 1 fibroblast cell unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 COL6A3 FBLN1 LUM WNT2 TCF21 FGFR4 INMT CES1 SAA1 VEGFDalveolar type I cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 SFTA2 SLC39A8 HOPX AGER CLIC5 RTKN2 AQP4 SCEL GRAMD2Aalveolar type II cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 SFTA2 SLC39A8 HOPX MFSD2A ABCA3 SFTPA2 LAMP3 BMP1apocrine unknown unknown large intestine None None unknown None keratin 7 keratin 19arteriole endothelial cell unknown unknown large intestine None None unknown None CD31 CD34 CD36arteriole endothelium unknown unknown large intestine None None unknown None CD31 CD34 CD36basal cell of bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 NGFRbasal cell of epithelium of lobular bronchiole unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 NGFRbasal cell of epithelium of respiratory bronchiole unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 SCGB3A2 KLK11 SOX4 SCGB1A1basal cell of epithelium of terminal bronchiole unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 NGFRbasal cell of epithelium of trachea unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 NGFRbasal cell of prostatic urethra unknown unknown prostate gland None None unknown None KRT5 S100A2 KRT15basal epithelial cell of tracheobronchial tree unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5basal epithelial cell of tracheobronchial tree unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 NGFRbasophil unknown unknown Blood None None unknown None HDC CLC CPA3 IL5RA GATA2 MS4A3 IL3RAbasophil unknown unknown Bone marrow None None unknown None HDC CLC CPA3 IL5RA GATA2 MS4A3 IL3RAbasophil unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A FCER1G C1orf162 CLEC7Ablood endothelial cell unknown unknown thoracic thymus None None unknown None A2M AQP1 BCAM IFI27 NPDC1 PLVAP RAMP2 RNASE1 SPARCL1 TM4SF1blood vessel smooth muscle cell unknown unknown pulmonary vascular system None None unknown None COL1A2 DCN MFAP4 PLN NTRK3 NOTCH3 HEY2blood vessel smooth muscle cell unknown unknown systemic artery None None unknown None COL1A2 DCN MFAP4 PLN NTRK3 NOTCH3 HEY2blood vessel smooth muscle cell unknown unknown venous blood vessel None None unknown None COL1A2 DCN MFAP4 PLN NTRK3 NOTCH3 HEY2blood vessel smooth muscle cell unknown unknown bronchial artery None None unknown None COL1A2 DCN MFAP4 ACTA2 DES NOTCH3 HEY2 NTRK3 ITGA7 MYH11blood vessel smooth muscle cell unknown unknown bronchial vein None None unknown None COL1A2 DCN MFAP4 ACTA2 DES NOTCH3 HEY2 NTRK3 ITGA7 MYH11bronchial smooth muscle cell unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 ACTA2 DES CNN1 MYH11 PLN LGR6 FAM83Dbronchial smooth muscle cell unknown unknown extrapulmonary bronchus None None unknown None COL1A2 DCN MFAP4 ACTA2 DES CNN1 MYH11 PLN LGR6 FAM83Dbronchiolar smooth muscle cell unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 ACTA2 DES CNN1 TAGLN PLN LGR6 MYH11cDC1 CD141 positive myeloid dendritic cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A FCER1G C1orf162 CLEC7A CD141 HLA DRB1 CLEC9A CADM1 FLT3cDC2 CD1c positive myeloid dendritic cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A FCER1G C1orf162 CLEC7A CD1c HLA DRB1 CLEC10A FCGR2B SIRPACD172acapillary endothelial cell unknown unknown prostate gland None None unknown None GJA1 CA4 PECAM1capillary endothelium unknown unknown large intestine None None unknown None CD31 CD34 CD36capsule mesenchymal stromal cell unknown unknown kidney None None unknown None Foxd1 VSX2ciliated cell of terminal ciliated ducts of submucosal glands unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 FOXJ1 TUBA1A DYNLRB2 TUBB4B RSPH1ciliated cell of the bronchus unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 FOXJ1 RSPH1 DYNLRB2 TUBB4Bciliated cell of the bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 FOXJ1 RSPH1 DYNLRB2 TUBB4B DNAH12ciliated columnar cell of tracheobronchial tree unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 FOXJ1 DYNLRB2 TUBB4B RSPH1ciliated epithelial cell unknown unknown Uterus None None unknown None EPCAM PIFO TPPP3 FOXJ1classical inflammatory monocyte unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A FCER1G C1orf162 CLEC7A CD14 S100A9 VCAN CCR2 FCN1club cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 SCGB1A1 SCGB3A2 CYP2F1club cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 SCGB1A1 SCGB3A2 CYP2F2columnar unknown unknown large intestine None None unknown None keratin 7common lymphoid progenitor unknown unknown Bone marrow None None unknown None CYGB ADA PRDX1 LAT2 UMODL1 CD200common myeloid progenitor unknown unknown Bone marrow None None unknown None HPGDS GATA2 CYTL1 SERPINB1 MESTconnective tissue type mast cell unknown unknown respiratory system None None unknown None MS4A2 SLC18A2 RGS13 TPSAB1 CPA3 KIT CMA1conventional dendritic cell 1 unknown unknown thoracic thymus None None unknown None BATF3 C1orf54 CLEC9A CPVL DNASE1L3 HLA DPA1 IRF8 LGALS2 LYZ RGCCconventional dendritic cell 2 unknown unknown thoracic thymus None None unknown None ALDH2 CD1C CLEC10A CTSH GSN HLA DQA1 HAL DQB1 JAML LGALS2 MNDAcortical thymic epithelial cell unknown unknown thoracic thymus None None unknown None CCL25 COX7A1 CTSV GNG11 PDLIM1 PLTP PRSS16 PSMB11 S100A14 SCXcorticomedullary thymic epithelial cell unknown unknown thoracic thymus None None unknown None CCL2 CCL25 CTSV CYR61 HCFC1R1 KRT5 P3H2 PLTP TDGF1 TFPI2cytotoxic CD4 T cell unknown unknown thoracic thymus None None unknown None ARID5B CKLF CST7 DUSP4 GZMA GZMK IL10 PRDM1 RGS1 RNF19Adendritic cell unknown unknown large intestine None None unknown None HLA DR CD11c CD123dendritic cell unknown unknown large intestine None None unknown None integrin subunit alpha E CD103 integrin subunit alpha M CD11bdendritic cell type 1 unknown unknown Bone marrow None None unknown None CLEC9A CADM1 XCR1dendritic cell type 1 DC1 unknown unknown Blood None None unknown None CLEC9A CADM1 XCR1dendritic cell type 2 unknown unknown Bone marrow None None unknown None CD1C FCER1A CLEC10A HLA DQA2 HLA DPB1 FCGR2Bdendritic cell type 2 DC2 unknown unknown Blood None None unknown None CD1C FCER1A CLEC10A HLA DQA2 HLA DPB1 FCGR2Bdendritic cell type 3 unknown unknown Bone marrow None None unknown None CD1C FCER1A CLEC10A S100A8 S100A9 CD36 CD163dendritic cell type 3 DC3 unknown unknown Blood None None unknown None CD1C FCER1A CLEC10A S100A8 S100A9 CD36 CD163double negative thymocyte 2 unknown unknown thoracic thymus None None unknown None BCL11B CD3E CD7 CD34 CD44 GATA3 MME PTCRA SPI1 TCF7double negative thymocyte 3 unknown unknown thoracic thymus None None unknown None BCL11B CD3E CD7 CD34 GATA3 MME PTCRA RAG2 TCF7double negative thymocyte 4 unknown unknown thoracic thymus None None unknown None BCL11B CD1A CD3E CD7 DNTT GATA3 MME PTCRA RAG2 TCF7double positive thymocyte unknown unknown thoracic thymus None None unknown None CD1A CD1B CD1E CD8A CD8B ELOVL4 SH3TC1 SMPD3 UHRF1early Megakaryocyte unknown unknown Bone marrow None None unknown None GATA2 FCER1A PLEK CAVIN2 PDLIM1early erythroid unknown unknown Bone marrow None None unknown None MYC APOC1 PRSS57 KCNH2 EPCAM CD36 KLF1 GATA1early thymic progenitor unknown unknown thoracic thymus None None unknown None BCL11B CD7 CD19 CD34 CD44 CD79B GATA3 IRF8 MPO SPI1eccrine unknown unknown large intestine None None unknown None keratin 7 keratin 19effector memory CD4 positive alpha beta T cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A CD3E IL7R CD3E CD4effector memory CD8 positive alpha beta T cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A CD3E CD8A CD3e CD3Dendocrine lineage cell unknown unknown Small Intestine None None unknown None CRYBA2endothelial cell unknown unknown Uterus None None unknown None CD34 SEMA3G ACKR1endothelial cell of artery unknown unknown systemic artery None None unknown None CLDN5 NOTCH4 CLEC14A ECSCR DKK2 GJA5 EFNB2 HEY1 SOX17endothelial cell of artery unknown unknown bronchial artery None None unknown None CLDN5 NOTCH4 CLEC14A ECSCR EFNB2 GJA5 IGFBP3 BMX DKK2endothelial cell of artery unknown unknown prostate gland None None unknown None GJA4 IGFBP3 PECAM1endothelial cell of respiratory system lymphatic vessel unknown unknown respiratory system None None unknown None CLDN5 ECSCR MMRN1 PROX1 CCL21 LYVE1endothelial cells unknown unknown Small Intestine None None unknown None NOVA2 SOX17endovascular extravillous trophoblast unknown unknown placenta None None unknown None HLA G KRT7 MCAM CDH5enterocyte unknown unknown Small Intestine None None unknown None BEST4 CA7 NEURL1 HES1eosinophil unknown unknown Blood None None unknown None HDC CLC CPA3 IL5RA GATA2 MS4A3 HPGDSeosinophil unknown unknown Bone marrow None None unknown None HDC CLC CPA3 IL5RA GATA2 MS4A3 HPGDSeosinophil unknown unknown large intestine None None unknown None CD11b CD294epithelial stem cell unknown unknown large intestine None None unknown None RGMB SOX9 CD44 Lgr5 LRIG1 SMOC2erythroid unknown unknown thoracic thymus None None unknown None AHSP ALAS2 BLVRB FAM178B HBA1 HBA2 HBB HBG1 HBG2 HBMfibroblast unknown unknown large intestine None None unknown None Col6A1 Col6A2fibroblast unknown unknown Small Intestine None None unknown None COL6A1 COL6A2fibroblast of pulmonary artery unknown unknown pulmonary vascular system None None unknown None COL1A2 MMP2fibroblasts unknown unknown Small Intestine None None unknown None COL6A1 COL6A2gamma delta T cell unknown unknown thoracic thymus None None unknown None AES ANXA1 CCR9 FCGRT LAT SELL SH3BP5 SMPD3 TESPA1 TRDCganglion unknown unknown large intestine None None unknown None peripherin MAP 2glandular epithelial cell unknown unknown Uterus None None unknown None EPCAM SCGB2A2 PAEP CXCL8glomus cell unknown unknown large intestine None None unknown None actin alpha 2 smooth muscle dopamine receptor D2goblet unknown unknown large intestine None None unknown None keratin 20 MUC2goblet cell unknown unknown Small Intestine None None unknown None MUC2 ITLN1 SLC26A2 CLCA4goblet cell of epithelium of lobar bronchus unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 MUC5AC SPDEF MUC5B TFF2 AGR2goblet cell of epithelium of lobar bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 MUC5AC SPDEF MUC5B TFF2 AGR2granulocyte macrophage progenitor cell unknown unknown Bone marrow None None unknown None CD34 CALR CLEC11A MPO AZU1group 3 innate lymphoid cell unknown unknown thoracic thymus None None unknown None CD52 IL7R JAML KLRB1 KRT86 LST1 LTB S100A4 TMIGD2 TRDChemopoietic stem cell unknown unknown Bone marrow None None unknown None AVP CRHBP NPR3 BEX1 PROM1 CD34 HLF MLLT3immature B cell unknown unknown Blood None None unknown None CD19 PAX5 IGHM MS4A1immature B cell unknown unknown Bone marrow None None unknown None CD19 PAX5 IGHM MS4A1immature NKT cell unknown unknown thoracic thymus None None unknown None CCL5 CD8A CST7 GIMAP4 GZMK GZMM NKG7 SAMD3 XCL1innate lymphoid cell unknown unknown large intestine None None unknown None CD127 CD117 CD161innate lymphoid cell unknown unknown Uterus None None unknown None CD69 KIT IL7R CXCR4 CCL5 SPINK2interstitial cell of Cajal unknown unknown large intestine None None unknown None CD117 CD34interstitial extravillous trophoblast unknown unknown placenta None None unknown None HLA G KRT7 MCAM PLAC8ionocyte epithelia unknown unknown prostate gland None None unknown None FOXI1 ATP6V0A4 DGKIkeratinocyte unknown unknown large intestine None None unknown None keratin 5 6 p60langerhans unknown unknown large intestine None None unknown None CD1a langerinlangerhans cells unknown unknown large intestine None None unknown None CD1a langerinlate erythroid unknown unknown Bone marrow None None unknown None HBB ALAS2 BPGM HBA2 HBG1 DCAF12 ADIPOR1luminal epithelial cell unknown unknown Uterus None None unknown None EPCAM LGR5 PTGS1lung ciliated cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 FOXJ1 RSPH1 DYNLRB2 TUBB4Blung megakaryocyte unknown unknown respiratory system None None unknown None ITGA2B ITGB3 PF4 GP1BAlung neuroendocrine cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 ASCL1 GRP CHGA CALCAlung neuroendocrine cell unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 ASCL1 GRP CALCA CHGAlung parenchyma resident eosinophil unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A EPX EAR11lung perichondrial fibroblast unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 COL6A3 FBLN1 LUM COL2A1lung perichondrial fibroblast unknown unknown extrapulmonary bronchus None None unknown None COL1A2 DCN MFAP4 COL6A3 FBLN1 COL2A1 LUMlung pericyte unknown unknown respiratory system None None unknown None COL1A2 DCN LAMC3 HIGD1B COX4I2 TRPC6 PDGFRBlymph node lymphatic vessel endothelial cell unknown unknown prostate gland None None unknown None LYVE1 FLT4 PECAM1lymphatic endothelial cell unknown unknown lymph vasculature None None unknown None FLT4 VEGFR 3 lymphatic endothelial cell unknown unknown thoracic thymus None None unknown None CCL21 FABP5 LAPTM5 MMRN1 NTS NUPR1 PROX1 SDPR TFF3 TFPIlymphatic endothelium unknown unknown large intestine None None unknown None CD31 podoplaninlymphatic endothelium unknown unknown large intestine None None unknown None PDL1 CD56 PGP9 5lympho myeloid progenitor cell unknown unknown Bone marrow None None unknown None CD34 BCL11A IL2RG JCHAIN SOX4 SYKlymphocyte unknown unknown Uterus None None unknown None PTPRC NCAM1macrophage unknown unknown large intestine None None unknown None HLA DR CD163 CD206 CD11b CD68macrophage unknown unknown large intestine None None unknown None CD3 CD4macrophage unknown unknown Small Intestine None None unknown None CD14macrophage unknown unknown thoracic thymus None None unknown None APOE C1QA C1QB C1QC LGMN MS4A7 RNASE1 SELENOP SLC40A1 STAB1macrophage unknown unknown Uterus None None unknown None CD68 CD14 CSF1R IL1B SEPP1mast cell unknown unknown Bone marrow None None unknown None HDC CLC CPA3 IL5RA GATA2 MS4A3 HPGDS TPSAB1 KITmast cell unknown unknown large intestine None None unknown None CD117 MCTmast cell unknown unknown Small Intestine None None unknown None HDCmast cell unknown unknown thoracic thymus None None unknown None CPA3 GATA2 HDC HPGDS IL1RL1 LMO4 PLIN2 TNFSF10 TPSAB1 TPSB2mast cell unknown unknown Uterus None None unknown None CD69 MS4A2 KIT CSF1mature CD8 T cell unknown unknown Blood None None unknown None CCL5 GZMH IL32 CD8A DUSP2 KLRG1 TRGC2 GZMKmature CD8 T cell unknown unknown Bone marrow None None unknown None CCL5 GZMH IL32 CD8A DUSP2 KLRG1 TRGC2 GZMKmature NK T cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A CD3E IL7R NCAM1 CD3Emature Natural killer unknown unknown Blood None None unknown None TRDC KLRB1 CLIC3 CST7 GZMA GZMB PRF1 FCGR3Amature Natural killer unknown unknown Bone marrow None None unknown None TRDC KLRB1 CLIC3 CST7 GZMA GZMB PRF1 FCGR3Amedullary thymic epithelial cell type 1 unknown unknown thoracic thymus None None unknown None CCL19 CH25H CLU FN1 KRT5 KRT14 KRT15 KRT19 PTGDS SAA1medullary thymic epithelial cell type 2 unknown unknown thoracic thymus None None unknown None CALML3 CCL19 CSTA FGF17 HLA DQA1 KRT17 NTHL1 SNCG TYW3 VIMmedullary thymic epithelial cell type 3 unknown unknown thoracic thymus None None unknown None CALML5 DEFB1 KRT6A KRT19 LYD PERP S100A9 SFN SLP1 SPINK5medullary thymic epithelial cell type 4 unknown unknown thoracic thymus None None unknown None ANXA1 ANXA4 BMX EPCAM FOXI1 HEPACAM2 KRT8 KRT18 LRMP RASSF6megakaryocyte erythroid mast cell progenitor unknown unknown Bone marrow None None unknown None CD34 SPINK2 PRSS57 GATA2 TESPA1 IL1B CTNNBL1 GATA1melanocyte unknown unknown large intestine None None unknown None S100 melanA SOX10memory B cell unknown unknown Blood None None unknown None CD19 MS4A1 IGHA1 IGHG1 CD82 SELL CD27memory B cell unknown unknown Bone marrow None None unknown None CD19 MS4A1 IGHA1 IGHG1 CD82 SELL CD27memory B cell unknown unknown thoracic thymus None None unknown None ADAM28 BANK1 CRIP1 GPR183 HLA DQA1 HLA DRA IGHA1 LY86 MS4A1 TNFRSF13Bmesothelial cell unknown unknown large intestine None None unknown None keratin 8 keratin 18 calretininmesothelial cell of visceral pleura unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 WT1 UPK3B ITLN1mid erythroid unknown unknown Bone marrow None None unknown None CD36 KLF1 TSPO2 RHAG RHCE SPTA1migratory dendritic cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A FCER1G C1orf162 CLEC7A CCR7 CCL19 LAD1monocyte unknown unknown thoracic thymus None None unknown None CD52 CTSS FCN1 LYZ S100A4 S100A6 S100A8 S100A9 S100A12 VCANmotor neuron unknown unknown spinal cord None None unknown None SNAP25 PRPHmucosal invariant T cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A CD3E IL7R KLRB1 PRF1 KLRG1mucus secreting cell of bronchus submucosal gland unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 MUC5B SPDEF AGR2mucus secreting cell of bronchus submucosal gland unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 MUC5B SPDEF AGR2mucus secreting cell of trachea gland unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 MUC5B SPDEF AGR2multipotent progenitor cell unknown unknown Bone marrow None None unknown None CD34 SPINK2 FLT3muscle unknown unknown large intestine None None unknown None aSMA smoothelinmyelocyte unknown unknown Bone marrow None None unknown None LCN2 CAMP LTF STOM CEACAM8myo medullary thymic epithelial cell unknown unknown thoracic thymus None None unknown None ACTA1 KLHL41 MYLPF MYOG NEB NNAT TNNI2 TNNT3 TPM2 TTNmyoepithelial unknown unknown large intestine None None unknown None aSMAmyoepithelial cell of bronchus submucosal gland unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 ACTA2 MYH11 KRT14 KRT5 CNN1myoepithelial cell of bronchus submucosal gland unknown unknown respiratory system None None unknown None CDH1 FXYD3 EPCAM ELF3 ACTA2 MYH11 KRT14 KRT5 CNN1myoepithelial cell of bronchus submucosal gland unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 ACTA2 MYH11 KRT14 KRT5 CNN1myoepithelial cell of trachea gland unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 ACTA2 MYH11 KRT14 KRT5 CNN1myofibroblast unknown unknown large intestine None None unknown None aSMAmyofibroblast unknown unknown Small Intestine None None unknown None TP53I3 DES ACTG2 CNN1naive B cell unknown unknown Blood None None unknown None CD19 PAX5 IGHM MS4A1 CD40 FCER2naive B cell unknown unknown Bone marrow None None unknown None CD19 PAX5 IGHM MS4A1 CD40 FCER2naive B cell unknown unknown thoracic thymus None None unknown None BIRC3 CD22 CD79A FCER2 HLA DQB1 HLA DRA IGHD IGHM MS4A1 TCL1Anaive thymus derived CD4 positive alpha beta T cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A CD3E IL7R CCR7 LEF1naive thymus derived CD8 positive alpha beta T cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A CD3E IL7R CD8B CCR7 MYC GMNNnatural killer cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A NKG7 KLRD1 TBX21 EOMES NKp46natural killer cell unknown unknown thoracic thymus None None unknown None CMC1 GNLY HOPX KLRB1 KLRC1 KLRD1 KLRF1 NKG7 TYROBP XCL2nerve unknown unknown large intestine None None unknown None PDL1 CD56 PGP9 5nerve unknown unknown large intestine None None unknown None S100 SOX10 PGP9 5nerve schwann cell unknown unknown large intestine None None unknown None S100 CD56 PGP9 5neuro medullary thymic epithelial cell unknown unknown thoracic thymus None None unknown None BEX1 CAMK2B CIB2 CLDN3 HES6 KIF19 MAP1B NNATneuroendocrine unknown unknown large intestine None None unknown None chromogranin A synaptophysin INSM1 INSL5neuroendocrine cell unknown unknown large intestine None None unknown None chromogranin A synaptophysin INSM1neuroendocrine cell of epithelium of lobar bronchus unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 ASCL1 GRP CHGA CALCAneuroendocrine cell of epithelium of lobar bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 ASCL1 GRP CHGA CALCAneutrophil unknown unknown Blood None None unknown None ITGAM MMP9 PGLYRP1 ORM1 S100A12 FCN1neutrophil unknown unknown Bone marrow None None unknown None ITGAM MMP9 PGLYRP1 ORM1 S100A12 FCN1neutrophil unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A FCER1G C1orf162 CLEC7A CSF3R FCGR3Bneutrophil normally intravascular only unknown unknown large intestine None None unknown None CD15 CD16non classical or patrolling monocyte unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A FCER1G C1orf162 CLEC7A MS4A7 CSF1R RGS18perichondrial fibroblast unknown unknown trachea None None unknown None COL1A2 DCN MFAP4 COL6A3 FBLN1 LGR4 LGR6 FLNB FGFR2pericryptal fibroblastic sheath unknown unknown large intestine None None unknown None aSMA WNT2B RSPO3pericryptal fibroblastic sheath unknown unknown large intestine None None unknown None aSMApericyte unknown unknown large intestine None None unknown None PDGFRBpericyte unknown unknown large intestine None None unknown None CD31perineurial cell unknown unknown large intestine None None unknown None CD34perivascular smooth muscle cell unknown unknown large intestine None None unknown None aSMAperivascular support cell unknown unknown Uterus None None unknown None ACTA2 MYH11plasma unknown unknown Small Intestine None None unknown None IGLL5plasma cell unknown unknown Bone marrow None None unknown None SDC1 DERL3 MZB1 IGKC SEC11C IGHG1 IGHA1 TNFRSF17plasma cell unknown unknown large intestine None None unknown None CD138plasma cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A MS4A1 BANK1 DERL3 MZB1 SDC1 CD38plasma cell unknown unknown thoracic thymus None None unknown None DERL3 FKBP11 IGHG1 IGHG3 IGKC JCHAIN MZB1 SEC11C SSR4 XBP1plasmacytoid dendritic cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A FCER1G C1orf162 CLEC7A IL3RA HLA DRB1 CLEC4C NRP1 CXCR3plasmacytoid dendritic cell unknown unknown thoracic thymus None None unknown None CCDC50 GZMB IL3RA IRF7 IRF8 JCHAIN LILRA4 PLAC8 PLD4 UGCGprecursor B cell unknown unknown Bone marrow None None unknown None CD19 PAX5 IGHM IGHDpro B progenitor unknown unknown Bone marrow None None unknown None DNTT MME VPREB1 RAG1promonocyte unknown unknown Bone marrow None None unknown None CX3CR1 CCR2 HLA DRA S100A4 S100A6 CST3promyelocyte unknown unknown Bone marrow None None unknown None MPO ELANE CTSG PRTN3 AZU1pulmonary artery endothelial cell unknown unknown pulmonary vascular system None None unknown None CLDN5 NOTCH4 CLEC14A ECSCRpulmonary ionocyte unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 ASCL3 FOXI1 BSND CLCNKBpulmonary ionocyte unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 ASCL3 FOXI1 BSND CLCNKBregulatory CD4 T cell unknown unknown large intestine None None unknown None CD4 FOXP3 CD25regulatory T cell unknown unknown respiratory system None None unknown None CD53 PTPRC CORO1A CD3E IL7R FOXP3 CTLA4 TNFRSF4 RTKN2 FANK1regulatory T cells unknown unknown thoracic thymus None None unknown None BATF CARD16 CTLA4 FOXP3 GBP2 IL32 PIM2 PMAIP1 S100A4 TIGITrespiratory suprabasal cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 NGFR KRT19 NOTCH3 KRT4respiratory suprabasal cell unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 TP63 KRT5 NGFR KRT19 NOTCH3schwann cell unknown unknown large intestine None None unknown None S100 calcium binding protein A2sebocyte unknown unknown large intestine None None unknown None keratin 7secondary crest myofibroblast unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 LTBP2 PDGFRA ACTA2 C1QTNF7 MYH11serous cell of epithelium of bronchus unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 PIGR LYZ LPO LTFserous cell of epithelium of trachea unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 LYZ PRR4 LPO LTFserous secreting cell of bronchus submucosal gland unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 PIGR LYZ LPO LTFskeletal muscle unknown unknown large intestine None None unknown None DESsmooth muscle unknown unknown large intestine None None unknown None aSMAsmooth muscle cell of the pulmonary artery unknown unknown pulmonary vascular system None None unknown None COL1A2 DCN MFAP4 PLN NTRK3 NOTCH3 HEY2squamous unknown unknown large intestine None None unknown None keratin 5 6 p60stem cell unknown unknown Small Intestine None None unknown None LGR5 ASCL2 OLFM4 RNF43stromal cell unknown unknown Uterus None None unknown None IGF1 PCOLCE MMP11 OGNsubepithelial membrane unknown unknown large intestine None None unknown None aSMAsurface intraepithelial CD4 lymphocyte unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD3 TCR CD4surface intraepithelial CD4 CD8 lymphocyte alpha beta unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD3 TCRsurface intraepithelial CD8 alph alpha positive alpha beta lymphocyte unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD3 TCR CD8surface intraepithelial CD8 alph beta positive alpha beta lymphocyte unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD3 TCR CD8surface intraepithelial CD8 alpha alpha positive alpha beta lymphocyte unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD3 TCR CD8surface intraepithelial CD8 alpha beta positive alpha beta lymphocyte unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD3 TCR CD8surface intraepithelial CD8 lymphocyte gamma delta unknown unknown large intestine None None unknown None CD3 CD7 CD2 CD5 CD3 TCR CD8sympathetic neuron unknown unknown respiratory system None None unknown None TUBB3thymic capsular fibroblast unknown unknown thoracic thymus None None unknown None C7 DPT HSPB6 MFAP4 PTGDS PTN RBP5 RSPO3 SPARCL1 SRPXthymic interlobular fibroblast unknown unknown thoracic thymus None None unknown None COL1A1 COL1A2 COL3A1 COL14A1 FBN1 FN1 IGFBP6 LUM MGP OGNtissue resident mucosal type mast cell unknown unknown respiratory system None None unknown None MS4A2 SLC18A2 RGS13 TPSAB1 TPSB2 KITtracheal goblet cell unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 MUC5AC SPDEF MUC5B TFF2tracheobronchial chondrocyte unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 COL2A1tracheobronchial chondrocyte unknown unknown extrapulmonary bronchus None None unknown None COL1A2 DCN MFAP4 COL2A1tracheobronchial chondrocyte unknown unknown trachea None None unknown None COL1A2 DCN MFAP4 COL2A1tracheobronchial goblet cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 MUC5AC SPDEF MUC5B TFF2 AGR2tracheobronchial smooth muscle unknown unknown respiratory system None None unknown None COL1A2 DCN MFAP4 ACTA2 DES CNN1 MYH11 PLN LGR6 FAM83Dtracheobronchial smooth muscle cell unknown unknown trachea None None unknown None COL1A2 DCN MFAP4 ACTA2 DES CNN1 MYH11 PLN LGR6 FAM83Dtransient amplifying cell unknown unknown large intestine None None unknown None keratin 20transitional unknown unknown large intestine None None unknown None keratin 7 keratin 19transitional B cell unknown unknown Blood None None unknown None IGLL5 SOX4 BCL7A TCL1A FCRLA CD24transitional B cell unknown unknown Bone marrow None None unknown None IGLL5 SOX4 BCL7A TCL1A FCRLA CD24transitional Dendritic Cell unknown unknown Bone marrow None None unknown None AXL SIGLEC6 CD22transitional Dendritic Cell tDC unknown unknown Blood None None unknown None AXL SIGLEC6 CD22tuft cell unknown unknown large intestine None None unknown None keratin 20 DCLK1 TRPM5 POU2F3 PTGS1tuft cell unknown unknown respiratory system None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 POU2F3 ASCL2 TRPM5 DCLK1tuft cell unknown unknown extrapulmonary bronchus None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 POU2F3 ASCL2 TRPM5 DCLK1tuft cell unknown unknown Small Intestine None None unknown None DCLK1 IRF7 SELENBP1tuft cell unknown unknown trachea None None unknown None CDH1 EPCAM ELF3 FXYD3 TSPAN1 POU2F3 ASCL2 TRPM5 DCLK1uterine dendritic cells unknown unknown Uterus None None unknown None IL1B CD68uterine macrophage unknown unknown placenta None None unknown None CD68 ITGAX CD209 MRC1uterine natural killer cell unknown unknown Uterus None None unknown None CD69 HMGB2 NCAM1 CCL5uterine smooth muscle type II cell unknown unknown Uterus None None unknown None ACTA2 MYH11 ACTG2vein endothelial cell unknown unknown prostate gland None None unknown None SELP CSF3 PECAM1vein endothelial cell of respiratory system unknown unknown respiratory system None None unknown None CLDN5 NOTCH4 CLEC14A ECSCR ACKR1 PDZRN4 NRF2vein endothelial cell of respiratory system unknown unknown pulmonary vascular system None None unknown None CLDN5 NOTCH4 CLEC14A ECSCR MMRN1vein endothelial cell of respiratory system unknown unknown venous blood vessel None None unknown None CLDN5 NOTCH4 CLEC14A ECSCR ACKR1 PLVAPvein endothelial cell of respiratory system unknown unknown bronchial vein None None unknown None CLDN5 NOTCH4 CLEC14A ECSCR EPHB4 NR2F2 ACKR1vein endothelial cell of respiratory system unknown unknown bronchial vein None None unknown None CLDN5 NOTCH4 CLEC14A ECSCR EFNB4 Nr2F2 ACKR1venous endothelium unknown unknown large intestine None None unknown None CD31 CD34 CD36venule endothelium unknown unknown large intestine None None unknown None CD31 CD34 CD36 List of databases relevant to this list editName Provider Sources of revenue sponsorsHubMap 18 A series of US based universities UnknownSee also editList of human cell types derived from the germ layers Human Cell AtlasReferences edit Hatton IA Galbraith ED Merleau NS Miettinen TP Smith BM Shander JA September 2023 The human cell count and size distribution Proceedings of the National Academy of Sciences of the United States of America 120 39 e2303077120 doi 10 1073 pnas 2303077120 PMC 10523466 PMID 37722043 a b Mapping the human body one cell at a time New study reveals the intricate relationship between cell size and count News Medical net 2023 09 19 Retrieved 2023 10 18 Society Max Planck Cellular cartography Charting the sizes and abundance of our body s cells reveals mathematical order underlying life medicalxpress com Retrieved 2023 10 18 a b Sender R Fuchs S Milo R August 2016 Revised Estimates for the Number of Human and Bacteria Cells in the Body PLOS Biology 14 8 e1002533 doi 10 1371 journal pbio 1002533 PMC 4991899 PMID 27541692 Hewings Martin Y 12 July 2017 How many cells are in the human body Medical News Today Retrieved 28 June 2023 Zimmer C 23 October 2013 How Many Cells Are In Your Body National Geographic Archived from the original on April 3 2021 Retrieved 29 June 2023 Hatton Ian A Galbraith Eric D Merleau Nono S C Miettinen Teemu P Smith Benjamin McDonald Shander Jeffery A 2023 09 26 The human cell count and size distribution Proceedings of the National Academy of Sciences 120 39 doi 10 1073 pnas 2303077120 ISSN 0027 8424 PMC 10523466 PMID 37722043 Home humancellatlas org Retrieved 5 May 2023 NIH to build a detailed map of cells within the human body National Institutes of Health NIH 26 September 2018 Retrieved 5 May 2023 Davis D The ambitious quest to map every cell in our body BBC Retrieved 5 May 2023 The HuBMAP Human BioMolecular Atlas Program HuBMAP Consortium Retrieved 5 May 2023 The Human Protein Atlas www proteinatlas org Retrieved 19 July 2023 Siibra Explorer atlases ebrains eu Retrieved 2023 07 02 Medical Data Analytics The Human Brain Project Retrieved 2 July 2023 Gilbert SF 2000 Endoderm Developmental Biology 6th ed Sunderland MA Sinauer Associates Retrieved 2023 07 02 Brunner Gland an overview ScienceDirect Topics www sciencedirect com Retrieved 2023 12 10 CCF ASCT B Reporter Hubmap Consortium The Human BioMolecular Atlas Program HuBMAP commonfund nih gov 5 January 2017 Retrieved 2023 07 12 External links edit nbsp Wikimedia Commons has media related to Human cells Human Cell Tree Map Human Cell Atlas Retrieved from https en wikipedia org w index php title List of distinct cell types in the adult human body amp oldid 1217553221, wikipedia, wiki, book, books, library,

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