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Microbial mat

A microbial mat is a multi-layered sheet of microorganisms, mainly bacteria and archaea, or bacteria alone. Microbial mats grow at interfaces between different types of material, mostly on submerged or moist surfaces, but a few survive in deserts.[1] A few are found as endosymbionts of animals.

The cyanobacterial algal mat, salty lake on the White Sea seaside

Although only a few centimetres thick at most, microbial mats create a wide range of internal chemical environments, and hence generally consist of layers of microorganisms that can feed on or at least tolerate the dominant chemicals at their level and which are usually of closely related species. In moist conditions mats are usually held together by slimy substances secreted by the microorganisms. In many cases some of the bacteria form tangled webs of filaments which make the mat tougher. The best known physical forms are flat mats and stubby pillars called stromatolites, but there are also spherical forms.

Microbial mats are the earliest form of life on Earth for which there is good fossil evidence, from 3,500 million years ago, and have been the most important members and maintainers of the planet's ecosystems. Originally they depended on hydrothermal vents for energy and chemical "food", but the development of photosynthesis allow mats to proliferate outside of these environments by utilizing a more widely available energy source, sunlight. The final and most significant stage of this liberation was the development of oxygen-producing photosynthesis, since the main chemical inputs for this are carbon dioxide and water.

As a result, microbial mats began to produce the atmosphere we know today, in which free oxygen is a vital component. At around the same time they may also have been the birthplace of the more complex eukaryote type of cell, of which all multicellular organisms are composed.[2] Microbial mats were abundant on the shallow seabed until the Cambrian substrate revolution, when animals living in shallow seas increased their burrowing capabilities and thus broke up the surfaces of mats and let oxygenated water into the deeper layers, poisoning the oxygen-intolerant microorganisms that lived there. Although this revolution drove mats off soft floors of shallow seas, they still flourish in many environments where burrowing is limited or impossible, including rocky seabeds and shores, and hyper-saline and brackish lagoons. They are found also on the floors of the deep oceans.

Because of microbial mats' ability to use almost anything as "food", there is considerable interest in industrial uses of mats, especially for water treatment and for cleaning up pollution.

Description

 
Stromatolites are formed by some microbial mats as the microbes slowly move upwards to avoid being smothered by sediment.

Microbial mats may also be referred to as algal mats and bacterial mats. They are a type of biofilm that is large enough to see with the naked eye and robust enough to survive moderate physical stresses. These colonies of bacteria form on surfaces at many types of interface, for example between water and the sediment or rock at the bottom, between air and rock or sediment, between soil and bed-rock, etc. Such interfaces form vertical chemical gradients, i.e. vertical variations in chemical composition, which make different levels suitable for different types of bacteria and thus divide microbial mats into layers, which may be sharply defined or may merge more gradually into each other.[3] A variety of microbes are able to transcend the limits of diffusion by using "nanowires" to shuttle electrons from their metabolic reactions up to two centimetres deep in the sediment – for example, electrons can be transferred from reactions involving hydrogen sulfide deeper within the sediment to oxygen in the water, which acts as an electron acceptor.[4]

The best-known types of microbial mat may be flat laminated mats, which form on approximately horizontal surfaces, and stromatolites, stubby pillars built as the microbes slowly move upwards to avoid being smothered by sediment deposited on them by water. However, there are also spherical mats, some on the outside of pellets of rock or other firm material and others inside spheres of sediment.[3]

Structure

A microbial mat consists of several layers, each of which is dominated by specific types of microorganism, mainly bacteria. Although the composition of individual mats varies depending on the environment, as a general rule the by-products of each group of microorganisms serve as "food" for other groups. In effect each mat forms its own food chain, with one or a few groups at the top of the food chain as their by-products are not consumed by other groups. Different types of microorganism dominate different layers based on their comparative advantage for living in that layer. In other words, they live in positions where they can out-perform other groups rather than where they would absolutely be most comfortable — ecological relationships between different groups are a combination of competition and co-operation. Since the metabolic capabilities of bacteria (what they can "eat" and what conditions they can tolerate) generally depend on their phylogeny (i.e. the most closely related groups have the most similar metabolisms), the different layers of a mat are divided both by their different metabolic contributions to the community and by their phylogenetic relationships.

In a wet environment where sunlight is the main source of energy, the uppermost layers are generally dominated by aerobic photosynthesizing cyanobacteria (blue-green bacteria whose color is caused by their having chlorophyll), while the lowest layers are generally dominated by anaerobic sulfate-reducing bacteria.[5] Sometimes there are intermediate (oxygenated only in the daytime) layers inhabited by facultative anaerobic bacteria. For example, in hypersaline ponds near Guerrero Negro (Mexico) various kind of mats were explored. There are some mats with a middle purple layer inhabited by photosynthesizing purple bacteria.[6] Some other mats have a white layer inhabited by chemotrophic sulfur oxidizing bacteria and beneath them an olive layer inhabited by photosynthesizing green sulfur bacteria and heterotrophic bacteria.[7] However, this layer structure is not changeless during a day: some species of cyanobacteria migrate to deeper layers at morning, and go back at evening, to avoid intensive solar light and UV radiation at mid-day.[7][8]

Microbial mats are generally held together and bound to their substrates by slimy extracellular polymeric substances which they secrete. In many cases some of the bacteria form filaments (threads), which tangle and thus increase the colonies' structural strength, especially if the filaments have sheaths (tough outer coverings).[3]

This combination of slime and tangled threads attracts other microorganisms which become part of the mat community, for example protozoa, some of which feed on the mat-forming bacteria, and diatoms, which often seal the surfaces of submerged microbial mats with thin, parchment-like coverings.[3]

Marine mats may grow to a few centimeters in thickness, of which only the top few millimeters are oxygenated.[9]

Types of environment colonized

Underwater microbial mats have been described as layers that live by exploiting and to some extent modifying local chemical gradients, i.e. variations in the chemical composition. Thinner, less complex biofilms live in many sub-aerial environments, for example on rocks, on mineral particles such as sand, and within soil. They have to survive for long periods without liquid water, often in a dormant state. Microbial mats that live in tidal zones, such as those found in the Sippewissett salt marsh, often contain a large proportion of similar microorganisms that can survive for several hours without water.[3]

Microbial mats and less complex types of biofilm are found at temperature ranges from –40 °C to +120 °C, because variations in pressure affect the temperatures at which water remains liquid.[3]

They even appear as endosymbionts in some animals, for example in the hindguts of some echinoids.[10]

Ecological and geological importance

 
Wrinkled Kinneyia-type sedimentary structures formed beneath cohesive microbial mats in peritidal zones.[11] The image shows the location, in the Burgsvik beds of Sweden, where the texture was first identified as evidence of a microbial mat.[12]
 
Kinneyia-like structure in the Grimsby Formation (Silurian) exposed in Niagara Gorge, New York
 
Blister-like microbial mat on ripple-marked surface of a Cambrian tidal flat at Blackberry Hill, Wisconsin

Microbial mats use all of the types of metabolism and feeding strategy that have evolved on Earth—anoxygenic and oxygenic photosynthesis; anaerobic and aerobic chemotrophy (using chemicals rather than sunshine as a source of energy); organic and inorganic respiration and fermentation (i..e converting food into energy with and without using oxygen in the process); autotrophy (producing food from inorganic compounds) and heterotrophy (producing food only from organic compounds, by some combination of predation and detritivory).[3]

Most sedimentary rocks and ore deposits have grown by a reef-like build-up rather than by "falling" out of the water, and this build-up has been at least influenced and perhaps sometimes caused by the actions of microbes. Stromatolites, bioherms (domes or columns similar internally to stromatolites) and biostromes (distinct sheets of sediment) are among such microbe-influenced build-ups.[3] Other types of microbial mat have created wrinkled "elephant skin" textures in marine sediments, although it was many years before these textures were recognized as trace fossils of mats.[12] Microbial mats have increased the concentration of metal in many ore deposits, and without this it would not be feasible to mine them—examples include iron (both sulfide and oxide ores), uranium, copper, silver and gold deposits.[3]

Role in the history of life

The earliest mats

Microbial mats are among the oldest clear signs of life, as microbially induced sedimentary structures (MISS) formed 3,480 million years ago have been found in western Australia.[3][13][14] At that early stage the mats' structure may already have been similar to that of modern mats that do not include photosynthesizing bacteria. It is even possible that non-photosynthesizing mats were present as early as 4,000 million years ago. If so, their energy source would have been hydrothermal vents (high-pressure hot springs around submerged volcanoes), and the evolutionary split between bacteria and archea may also have occurred around this time.[15]

The earliest mats were probably small, single-species biofilms of chemotrophs that relied on hydrothermal vents to supply both energy and chemical "food". Within a short time (by geological standards) the build-up of dead microorganisms would have created an ecological niche for scavenging heterotrophs, possibly methane-emitting and sulfate-reducing organisms that would have formed new layers in the mats and enriched their supply of biologically useful chemicals.[15]

Photosynthesis

It is generally thought that photosynthesis, the biological generation of chemical energy from light, evolved shortly after 3,000 million years ago (3 billion).[15] However an isotope analysis suggests that oxygenic photosynthesis may have been widespread as early as 3,500 million years ago.[15] The eminent researcher into Earth's earliest life, William Schopf, argues that, if one did not know their age, one would classify some of the fossil organisms in Australian stromatolites from 3,500 million years ago as cyanobacteria, which are oxygen-producing photosynthesizers.[16] There are several different types of photosynthetic reaction, and analysis of bacterial DNA indicates that photosynthesis first arose in anoxygenic purple bacteria, while the oxygenic photosynthesis seen in cyanobacteria and much later in plants was the last to evolve.[17]

The earliest photosynthesis may have been powered by infra-red light, using modified versions of pigments whose original function was to detect infra-red heat emissions from hydrothermal vents. The development of photosynthetic energy generation enabled the microorganisms first to colonize wider areas around vents and then to use sunlight as an energy source. The role of the hydrothermal vents was now limited to supplying reduced metals into the oceans as a whole rather than being the main supporters of life in specific locations.[17] Heterotrophic scavengers would have accompanied the photosynthesizers in their migration out of the "hydrothermal ghetto".[15]

The evolution of purple bacteria, which do not produce or use oxygen but can tolerate it, enabled mats to colonize areas that locally had relatively high concentrations of oxygen, which is toxic to organisms that are not adapted to it.[18] Microbial mats would have been separated into oxidized and reduced layers, and this specialization would have increased their productivity.[15] It may be possible to confirm this model by analyzing the isotope ratios of both carbon and sulfur in sediments laid down in shallow water.[15]

The last major stage in the evolution of microbial mats was the appearance of cyanobacteria, photosynthesizers which both produce and use oxygen. This gave undersea mats their typical modern structure: an oxygen-rich top layer of cyanobacteria; a layer of photosynthesizing purple bacteria that could tolerate oxygen; and oxygen-free, H2S-dominated lower layers of heterotrophic scavengers, mainly methane-emitting and sulfate-reducing organisms.[15]

It is estimated that the appearance of oxygenic photosynthesis increased biological productivity by a factor of between 100 and 1,000. All photosynthetic reactions require a reducing agent, but the significance of oxygenic photosynthesis is that it uses water as a reducing agent, and water is much more plentiful than the geologically produced reducing agents on which photosynthesis previously depended. The resulting increases in the populations of photosynthesizing bacteria in the top layers of microbial mats would have caused corresponding population increases among the chemotrophic and heterotrophic microorganisms that inhabited the lower layers and which fed respectively on the by-products of the photosynthesizers and on the corpses and / or living bodies of the other mat organisms. These increases would have made microbial mats the planet's dominant ecosystems. From this point onwards life itself produced significantly more of the resources it needed than did geochemical processes.[19]

Oxygenic photosynthesis in microbial mats would also have increased the free oxygen content of the Earth's atmosphere, both directly by emitting oxygen and because the mats emitted molecular hydrogen (H2), some of which would have escaped from the Earth's atmosphere before it could re-combine with free oxygen to form more water. Microbial mats thus played a major role in the evolution of organisms which could first tolerate free oxygen and then use it as an energy source.[19] Oxygen is toxic to organisms that are not adapted to it, but greatly increases the metabolic efficiency of oxygen-adapted organisms[18] — for example anaerobic fermentation produces a net yield of two molecules of adenosine triphosphate, cells' internal "fuel", per molecule of glucose, while aerobic respiration produces a net yield of 36.[20] The oxygenation of the atmosphere was a prerequisite for the evolution of the more complex eukaryote type of cell, from which all multicellular organisms are built.[21]

Cyanobacteria have the most complete biochemical "toolkits" of all the mat-forming organisms: the photosynthesis mechanisms of both green bacteria and purple bacteria; oxygen production; and the Calvin cycle, which converts carbon dioxide and water into carbohydrates and sugars. It is likely that they acquired many of these sub-systems from existing mat organisms, by some combination of horizontal gene transfer and endosymbiosis followed by fusion. Whatever the causes, cyanobacteria are the most self-sufficient of the mat organisms and were well-adapted to strike out on their own both as floating mats and as the first of the phytoplankton, which forms the basis of most marine food chains.[15]

Origin of eukaryotes

The time at which eukaryotes first appeared is still uncertain: there is reasonable evidence that fossils dated between 1,600 million years ago and 2,100 million years ago represent eukaryotes,[22] but the presence of steranes in Australian shales may indicate that eukaryotes were present 2,700 million years ago.[23] There is still debate about the origins of eukaryotes, and many of the theories focus on the idea that a bacterium first became an endosymbiont of an anaerobic archean and then fused with it to become one organism. If such endosymbiosis was an important factor, microbial mats would have encouraged it.[2] There are two known variations of this scenario:

  • The boundary between the oxygenated and oxygen-free zones of a mat would have moved up when photosynthesis shut down at night and back down when photosynthesis resumed after the next sunrise. Symbiosis between independent aerobic and anaerobic organisms would have enabled both to live comfortably in the zone that was subject to oxygen "tides", and subsequent endosymbiosis would have made such partnerships more mobile.[15]
  • The initial partnership may have been between anaerobic archea that required molecular hydrogen (H2) and heterotrophic bacteria that produced it and could live both with and without oxygen.[15][24]

Life on land

Microbial mats from ~1,200 million years ago provide the first evidence of life in the terrestrial realm.[25]

The earliest multicellular "animals"

 
Before:
After:
Sessile organism
anchored in mat
Animal grazing
on mat
Animals embedded
in mat
Animals
burrowing
just under
mat
    =Microbial mat
Firm, layered, anoxic, sulphidic substrate
Animals moving on / in
surface of sea-floor
Loose,
oxygenated
upper substrate
with
burrowing
animals
 
Before and after the Cambrian substrate revolution

The Ediacara biota are the earliest widely accepted evidence of multicellular "animals". Most Ediacaran strata with the "elephant skin" texture characteristic of microbial mats contain fossils, and Ediacaran fossils are hardly ever found in beds that do not contain these microbial mats.[26] Adolf Seilacher categorized the "animals" as: "mat encrusters", which were permanently attached to the mat; "mat scratchers", which grazed the surface of the mat without destroying it; "mat stickers", suspension feeders that were partially embedded in the mat; and "undermat miners", which burrowed underneath the mat and fed on decomposing mat material.[27]

The Cambrian substrate revolution

In the Early Cambrian, however, organisms began to burrow vertically for protection or food, breaking down the microbial mats, and thus allowing water and oxygen to penetrate a considerable distance below the surface and kill the oxygen-intolerant microorganisms in the lower layers. As a result of this Cambrian substrate revolution, marine microbial mats are confined to environments in which burrowing is non-existent or negligible:[28] very harsh environments, such as hyper-saline lagoons or brackish estuaries, which are uninhabitable for the burrowing organisms that broke up the mats;[29] rocky "floors" which the burrowers cannot penetrate;[28] the depths of the oceans, where burrowing activity today is at a similar level to that in the shallow coastal seas before the revolution.[28]

Current status

Although the Cambrian substrate revolution opened up new niches for animals, it was not catastrophic for microbial mats, but it did greatly reduce their extent.

How microbial mats help paleontologists

Most fossils preserve only the hard parts of organisms, e.g. shells. The rare cases where soft-bodied fossils are preserved (the remains of soft-bodied organisms and also of the soft parts of organisms for which only hard parts such as shells are usually found) are extremely valuable because they provide information about organisms that are hardly ever fossilized and much more information than is usually available about those for which only the hard parts are usually preserved.[30] Microbial mats help to preserve soft-bodied fossils by:

  • Capturing corpses on the sticky surfaces of mats and thus preventing them from floating or drifting away.[30]
  • Physically protecting them from being eaten by scavengers and broken up by burrowing animals, and protecting fossil-bearing sediments from erosion. For example, the speed of water current required to erode sediment bound by a mat is 20–30 times as great as the speed required to erode a bare sediment.[30]
  • Preventing or reducing decay both by physically screening the remains from decay-causing bacteria and by creating chemical conditions that are hostile to decay-causing bacteria.[30]
  • Preserving tracks and burrows by protecting them from erosion.[30] Many trace fossils date from significantly earlier than the body fossils of animals that are thought to have been capable of making them and thus improve paleontologists' estimates of when animals with these capabilities first appeared.[31]

Industrial uses

The ability of microbial mat communities to use a vast range of "foods" has recently led to interest in industrial uses. There have been trials of microbial mats for purifying water, both for human use and in fish farming,[32][33] and studies of their potential for cleaning up oil spills.[34] As a result of the growing commercial potential, there have been applications for and grants of patents relating to the growing, installation and use of microbial mats, mainly for cleaning up pollutants and waste products.[35]

See also

Notes

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  2. ^ a b Nobs, Stephanie-Jane; MacLeod, Fraser I.; Wong, Hon Lun; Burns, Brendan P. (2022-05-01). "Eukarya the chimera: eukaryotes, a secondary innovation of the two domains of life?". Trends in Microbiology. 30 (5): 421–431. doi:10.1016/j.tim.2021.11.003. ISSN 0966-842X. PMID 34863611. S2CID 244823103.
  3. ^ a b c d e f g h i j Krumbein, W.E.; Brehm, U.; Gerdes, G.; Gorbushina, A.A.; Levit, G.; Palinska, K.A. (2003). "Biofilm, Biodictyon, Biomat Microbialites, Oolites, Stromatolites, Geophysiology, Global Mechanism, Parahistology". In Krumbein, W.E.; Paterson, D.M.; Zavarzin, G.A. (eds.). (PDF). Kluwer Academic. pp. 1–28. ISBN 978-1-4020-1597-7. Archived from the original (PDF) on January 6, 2007. Retrieved 2008-07-09.
  4. ^ Nielsen, L.; Risgaard-Petersen, N.; Fossing, H.; Christensen, P.; Sayama, M. (2010). "Electric currents couple spatially separated biogeochemical processes in marine sediment". Nature. 463 (7284): 1071–1074. Bibcode:2010Natur.463.1071N. doi:10.1038/nature08790. PMID 20182510. S2CID 205219761.
    • Katharine Sanderson (24 February 2010). "Bacteria buzzing in the seabed". Nature News. doi:10.1038/news.2010.90.
  5. ^ Risatti, J. B.; Capman, W.C.; Stahl, D.A. (October 11, 1994). "Community structure of a microbial mat: the phylogenetic dimension". Proceedings of the National Academy of Sciences. 91 (21): 10173–7. Bibcode:1994PNAS...9110173R. doi:10.1073/pnas.91.21.10173. PMC 44980. PMID 7937858.
  6. ^ Lucas J. Stal: Physiological ecology of cyanobacteria in microbial mats and other communities, New Phytologist (1995), 131, 1–32
  7. ^ a b Garcia-Pichel F., Mechling M., Castenholz R.W., Diel Migrations of Microorganisms within a Benthic, Hypersaline Mat Community, Appl. and Env. Microbiology, May 1994, pp. 1500–1511
  8. ^ Bebout B.M., Garcia-Pichel F., UV B-Induced Vertical Migrations of Cyanobacteria in a Microbial Mat, Appl. Environ. Microbiol., Dec 1995, 4215–4222, Vol 61, No. 12
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  14. ^ Noffke, Nora; Christian, Christian; Wacey, David; Hazen, Robert M. (8 November 2013). "Microbially Induced Sedimentary Structures Recording an Ancient Ecosystem in the ca. 3.48 Billion-Year-Old Dresser Formation, Pilbara, Western Australia". Astrobiology. 13 (12): 1103–24. Bibcode:2013AsBio..13.1103N. doi:10.1089/ast.2013.1030. PMC 3870916. PMID 24205812.
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  16. ^ Schopf, J.W. (1992). "Geology and Paleobiology of the Archean Earth". In Schopf, J.W.; Klein, C. (eds.). The Proterozoic Biosphere: A Multidisciplinary Study. Cambridge University Press. ISBN 978-0-521-36615-1. Retrieved 2008-07-17.
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  19. ^ a b Hoehler, T.M.; Bebout, B.M.; Des Marais, D.J. (19 July 2001). "The role of microbial mats in the production of reduced gases on the early Earth". Nature. 412 (6844): 324–7. Bibcode:2001Natur.412..324H. doi:10.1038/35085554. PMID 11460161. S2CID 4365775.
  20. ^ . University of California, Davis. Archived from the original on September 8, 2008. Retrieved 2008-07-14.
  21. ^ Hedges, S.B.; Blair, J.E; Venturi, M.L.; Shoe, J.L (28 January 2004). "A molecular timescale of eukaryote evolution and the rise of complex multicellular life". BMC Evolutionary Biology. 4: 2. doi:10.1186/1471-2148-4-2. PMC 341452. PMID 15005799.
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  27. ^ Seilacher, A. (1999). "Biomat-related lifestyles in the Precambrian". PALAIOS. 14 (1): 86–93. Bibcode:1999Palai..14...86S. doi:10.2307/3515363. JSTOR 3515363. Retrieved 2008-07-17.
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  30. ^ a b c d e Briggs, D.E.G. (2003). "The role of biofilms in the fossilization of non-biomineralized tissues". In Krumbein, W.E.; Paterson, D.M.; Zavarzin, G.A. (eds.). Fossil and Recent Biofilms: A Natural History of Life on Earth. Kluwer Academic. pp. 281–290. ISBN 978-1-4020-1597-7. Retrieved 2008-07-09.
  31. ^ Seilacher, A. (1994). "How valid is Cruziana Stratigraphy?". International Journal of Earth Sciences. 83 (4): 752–8. Bibcode:1994GeoRu..83..752S. doi:10.1007/BF00251073. S2CID 129504434.
  32. ^ Potts, D.A.; Patenaude, E.L.; Görres, J.H.; Amador, J.A. "Wastewater Renovation and Hydraulic Performance of a Low Profile Leaching System" (PDF). GeoMatrix, Inc. Retrieved 2008-07-17.[dead link]
  33. ^ Bender, J (August 2004). "A waste effluent treatment system based on microbial mats for black sea bass Centropristis striata recycled-water mariculture". Aquacultural Engineering. 31 (1–2): 73–82. doi:10.1016/j.aquaeng.2004.02.001. Retrieved 2008-07-17.
  34. ^ . ISTworld. Archived from the original on 2011-07-23. Retrieved 2008-07-17.
  35. ^ "Compositions and methods of use of constructed microbial mats – United States Patent 6033559". Retrieved 2008-07-17.; "Silage-microbial mat system and method – United States Patent 5522985". Retrieved 2008-07-17.; "GeoMat". GeoMatrix, Inc. Retrieved 2008-07-17.[dead link] cites U.S. Patents 7351005 and 7374670

References

  • Seckbach S (2010) Microbial Mats: Modern and Ancient Microorganisms in Stratified Systems Springer, ISBN 978-90-481-3798-5.

External links

  • Jürgen Schieber. "Microbial Mat Page". Retrieved 2008-07-01. – outline of microbial mats and pictures of mats in various situations and at various magnifications.

microbial, microbial, multi, layered, sheet, microorganisms, mainly, bacteria, archaea, bacteria, alone, grow, interfaces, between, different, types, material, mostly, submerged, moist, surfaces, survive, deserts, found, endosymbionts, animals, cyanobacterial,. A microbial mat is a multi layered sheet of microorganisms mainly bacteria and archaea or bacteria alone Microbial mats grow at interfaces between different types of material mostly on submerged or moist surfaces but a few survive in deserts 1 A few are found as endosymbionts of animals The cyanobacterial algal mat salty lake on the White Sea seaside Although only a few centimetres thick at most microbial mats create a wide range of internal chemical environments and hence generally consist of layers of microorganisms that can feed on or at least tolerate the dominant chemicals at their level and which are usually of closely related species In moist conditions mats are usually held together by slimy substances secreted by the microorganisms In many cases some of the bacteria form tangled webs of filaments which make the mat tougher The best known physical forms are flat mats and stubby pillars called stromatolites but there are also spherical forms Microbial mats are the earliest form of life on Earth for which there is good fossil evidence from 3 500 million years ago and have been the most important members and maintainers of the planet s ecosystems Originally they depended on hydrothermal vents for energy and chemical food but the development of photosynthesis allow mats to proliferate outside of these environments by utilizing a more widely available energy source sunlight The final and most significant stage of this liberation was the development of oxygen producing photosynthesis since the main chemical inputs for this are carbon dioxide and water As a result microbial mats began to produce the atmosphere we know today in which free oxygen is a vital component At around the same time they may also have been the birthplace of the more complex eukaryote type of cell of which all multicellular organisms are composed 2 Microbial mats were abundant on the shallow seabed until the Cambrian substrate revolution when animals living in shallow seas increased their burrowing capabilities and thus broke up the surfaces of mats and let oxygenated water into the deeper layers poisoning the oxygen intolerant microorganisms that lived there Although this revolution drove mats off soft floors of shallow seas they still flourish in many environments where burrowing is limited or impossible including rocky seabeds and shores and hyper saline and brackish lagoons They are found also on the floors of the deep oceans Because of microbial mats ability to use almost anything as food there is considerable interest in industrial uses of mats especially for water treatment and for cleaning up pollution Contents 1 Description 1 1 Structure 1 2 Types of environment colonized 1 3 Ecological and geological importance 2 Role in the history of life 2 1 The earliest mats 2 2 Photosynthesis 2 3 Origin of eukaryotes 2 4 Life on land 2 5 The earliest multicellular animals 2 6 The Cambrian substrate revolution 2 7 Current status 3 How microbial mats help paleontologists 4 Industrial uses 5 See also 6 Notes 7 References 8 External linksDescription Edit Stromatolites are formed by some microbial mats as the microbes slowly move upwards to avoid being smothered by sediment Microbial mats may also be referred to as algal mats and bacterial mats They are a type of biofilm that is large enough to see with the naked eye and robust enough to survive moderate physical stresses These colonies of bacteria form on surfaces at many types of interface for example between water and the sediment or rock at the bottom between air and rock or sediment between soil and bed rock etc Such interfaces form vertical chemical gradients i e vertical variations in chemical composition which make different levels suitable for different types of bacteria and thus divide microbial mats into layers which may be sharply defined or may merge more gradually into each other 3 A variety of microbes are able to transcend the limits of diffusion by using nanowires to shuttle electrons from their metabolic reactions up to two centimetres deep in the sediment for example electrons can be transferred from reactions involving hydrogen sulfide deeper within the sediment to oxygen in the water which acts as an electron acceptor 4 The best known types of microbial mat may be flat laminated mats which form on approximately horizontal surfaces and stromatolites stubby pillars built as the microbes slowly move upwards to avoid being smothered by sediment deposited on them by water However there are also spherical mats some on the outside of pellets of rock or other firm material and others inside spheres of sediment 3 Structure Edit A microbial mat consists of several layers each of which is dominated by specific types of microorganism mainly bacteria Although the composition of individual mats varies depending on the environment as a general rule the by products of each group of microorganisms serve as food for other groups In effect each mat forms its own food chain with one or a few groups at the top of the food chain as their by products are not consumed by other groups Different types of microorganism dominate different layers based on their comparative advantage for living in that layer In other words they live in positions where they can out perform other groups rather than where they would absolutely be most comfortable ecological relationships between different groups are a combination of competition and co operation Since the metabolic capabilities of bacteria what they can eat and what conditions they can tolerate generally depend on their phylogeny i e the most closely related groups have the most similar metabolisms the different layers of a mat are divided both by their different metabolic contributions to the community and by their phylogenetic relationships In a wet environment where sunlight is the main source of energy the uppermost layers are generally dominated by aerobic photosynthesizing cyanobacteria blue green bacteria whose color is caused by their having chlorophyll while the lowest layers are generally dominated by anaerobic sulfate reducing bacteria 5 Sometimes there are intermediate oxygenated only in the daytime layers inhabited by facultative anaerobic bacteria For example in hypersaline ponds near Guerrero Negro Mexico various kind of mats were explored There are some mats with a middle purple layer inhabited by photosynthesizing purple bacteria 6 Some other mats have a white layer inhabited by chemotrophic sulfur oxidizing bacteria and beneath them an olive layer inhabited by photosynthesizing green sulfur bacteria and heterotrophic bacteria 7 However this layer structure is not changeless during a day some species of cyanobacteria migrate to deeper layers at morning and go back at evening to avoid intensive solar light and UV radiation at mid day 7 8 Microbial mats are generally held together and bound to their substrates by slimy extracellular polymeric substances which they secrete In many cases some of the bacteria form filaments threads which tangle and thus increase the colonies structural strength especially if the filaments have sheaths tough outer coverings 3 This combination of slime and tangled threads attracts other microorganisms which become part of the mat community for example protozoa some of which feed on the mat forming bacteria and diatoms which often seal the surfaces of submerged microbial mats with thin parchment like coverings 3 Marine mats may grow to a few centimeters in thickness of which only the top few millimeters are oxygenated 9 Types of environment colonized Edit Underwater microbial mats have been described as layers that live by exploiting and to some extent modifying local chemical gradients i e variations in the chemical composition Thinner less complex biofilms live in many sub aerial environments for example on rocks on mineral particles such as sand and within soil They have to survive for long periods without liquid water often in a dormant state Microbial mats that live in tidal zones such as those found in the Sippewissett salt marsh often contain a large proportion of similar microorganisms that can survive for several hours without water 3 Microbial mats and less complex types of biofilm are found at temperature ranges from 40 C to 120 C because variations in pressure affect the temperatures at which water remains liquid 3 They even appear as endosymbionts in some animals for example in the hindguts of some echinoids 10 Ecological and geological importance Edit Wrinkled Kinneyia type sedimentary structures formed beneath cohesive microbial mats in peritidal zones 11 The image shows the location in the Burgsvik beds of Sweden where the texture was first identified as evidence of a microbial mat 12 Kinneyia like structure in the Grimsby Formation Silurian exposed in Niagara Gorge New York Blister like microbial mat on ripple marked surface of a Cambrian tidal flat at Blackberry Hill Wisconsin Microbial mats use all of the types of metabolism and feeding strategy that have evolved on Earth anoxygenic and oxygenic photosynthesis anaerobic and aerobic chemotrophy using chemicals rather than sunshine as a source of energy organic and inorganic respiration and fermentation i e converting food into energy with and without using oxygen in the process autotrophy producing food from inorganic compounds and heterotrophy producing food only from organic compounds by some combination of predation and detritivory 3 Most sedimentary rocks and ore deposits have grown by a reef like build up rather than by falling out of the water and this build up has been at least influenced and perhaps sometimes caused by the actions of microbes Stromatolites bioherms domes or columns similar internally to stromatolites and biostromes distinct sheets of sediment are among such microbe influenced build ups 3 Other types of microbial mat have created wrinkled elephant skin textures in marine sediments although it was many years before these textures were recognized as trace fossils of mats 12 Microbial mats have increased the concentration of metal in many ore deposits and without this it would not be feasible to mine them examples include iron both sulfide and oxide ores uranium copper silver and gold deposits 3 Role in the history of life EditHistory of life 4500 4000 3500 3000 2500 2000 1500 1000 500 0 PhanProterozoicArcheanHadean Meteor Bombardment ends first geochemical signs of life Earliest stromatolites Beginning of photosynthesis Beginning of atmospheric oxygen First eukaryotes First multicellular organisms Ediacaran organisms Cambrian substrate revolution Phanerozoic eon Proterozoic eon Archean eon Hadean eonA very brief history of life on Earth Axis scale is in millions of years ago Further information Timeline of evolution The earliest mats Edit Microbial mats are among the oldest clear signs of life as microbially induced sedimentary structures MISS formed 3 480 million years ago have been found in western Australia 3 13 14 At that early stage the mats structure may already have been similar to that of modern mats that do not include photosynthesizing bacteria It is even possible that non photosynthesizing mats were present as early as 4 000 million years ago If so their energy source would have been hydrothermal vents high pressure hot springs around submerged volcanoes and the evolutionary split between bacteria and archea may also have occurred around this time 15 The earliest mats were probably small single species biofilms of chemotrophs that relied on hydrothermal vents to supply both energy and chemical food Within a short time by geological standards the build up of dead microorganisms would have created an ecological niche for scavenging heterotrophs possibly methane emitting and sulfate reducing organisms that would have formed new layers in the mats and enriched their supply of biologically useful chemicals 15 Photosynthesis Edit It is generally thought that photosynthesis the biological generation of chemical energy from light evolved shortly after 3 000 million years ago 3 billion 15 However an isotope analysis suggests that oxygenic photosynthesis may have been widespread as early as 3 500 million years ago 15 The eminent researcher into Earth s earliest life William Schopf argues that if one did not know their age one would classify some of the fossil organisms in Australian stromatolites from 3 500 million years ago as cyanobacteria which are oxygen producing photosynthesizers 16 There are several different types of photosynthetic reaction and analysis of bacterial DNA indicates that photosynthesis first arose in anoxygenic purple bacteria while the oxygenic photosynthesis seen in cyanobacteria and much later in plants was the last to evolve 17 The earliest photosynthesis may have been powered by infra red light using modified versions of pigments whose original function was to detect infra red heat emissions from hydrothermal vents The development of photosynthetic energy generation enabled the microorganisms first to colonize wider areas around vents and then to use sunlight as an energy source The role of the hydrothermal vents was now limited to supplying reduced metals into the oceans as a whole rather than being the main supporters of life in specific locations 17 Heterotrophic scavengers would have accompanied the photosynthesizers in their migration out of the hydrothermal ghetto 15 The evolution of purple bacteria which do not produce or use oxygen but can tolerate it enabled mats to colonize areas that locally had relatively high concentrations of oxygen which is toxic to organisms that are not adapted to it 18 Microbial mats would have been separated into oxidized and reduced layers and this specialization would have increased their productivity 15 It may be possible to confirm this model by analyzing the isotope ratios of both carbon and sulfur in sediments laid down in shallow water 15 The last major stage in the evolution of microbial mats was the appearance of cyanobacteria photosynthesizers which both produce and use oxygen This gave undersea mats their typical modern structure an oxygen rich top layer of cyanobacteria a layer of photosynthesizing purple bacteria that could tolerate oxygen and oxygen free H2S dominated lower layers of heterotrophic scavengers mainly methane emitting and sulfate reducing organisms 15 It is estimated that the appearance of oxygenic photosynthesis increased biological productivity by a factor of between 100 and 1 000 All photosynthetic reactions require a reducing agent but the significance of oxygenic photosynthesis is that it uses water as a reducing agent and water is much more plentiful than the geologically produced reducing agents on which photosynthesis previously depended The resulting increases in the populations of photosynthesizing bacteria in the top layers of microbial mats would have caused corresponding population increases among the chemotrophic and heterotrophic microorganisms that inhabited the lower layers and which fed respectively on the by products of the photosynthesizers and on the corpses and or living bodies of the other mat organisms These increases would have made microbial mats the planet s dominant ecosystems From this point onwards life itself produced significantly more of the resources it needed than did geochemical processes 19 Oxygenic photosynthesis in microbial mats would also have increased the free oxygen content of the Earth s atmosphere both directly by emitting oxygen and because the mats emitted molecular hydrogen H2 some of which would have escaped from the Earth s atmosphere before it could re combine with free oxygen to form more water Microbial mats thus played a major role in the evolution of organisms which could first tolerate free oxygen and then use it as an energy source 19 Oxygen is toxic to organisms that are not adapted to it but greatly increases the metabolic efficiency of oxygen adapted organisms 18 for example anaerobic fermentation produces a net yield of two molecules of adenosine triphosphate cells internal fuel per molecule of glucose while aerobic respiration produces a net yield of 36 20 The oxygenation of the atmosphere was a prerequisite for the evolution of the more complex eukaryote type of cell from which all multicellular organisms are built 21 Cyanobacteria have the most complete biochemical toolkits of all the mat forming organisms the photosynthesis mechanisms of both green bacteria and purple bacteria oxygen production and the Calvin cycle which converts carbon dioxide and water into carbohydrates and sugars It is likely that they acquired many of these sub systems from existing mat organisms by some combination of horizontal gene transfer and endosymbiosis followed by fusion Whatever the causes cyanobacteria are the most self sufficient of the mat organisms and were well adapted to strike out on their own both as floating mats and as the first of the phytoplankton which forms the basis of most marine food chains 15 Origin of eukaryotes Edit The time at which eukaryotes first appeared is still uncertain there is reasonable evidence that fossils dated between 1 600 million years ago and 2 100 million years ago represent eukaryotes 22 but the presence of steranes in Australian shales may indicate that eukaryotes were present 2 700 million years ago 23 There is still debate about the origins of eukaryotes and many of the theories focus on the idea that a bacterium first became an endosymbiont of an anaerobic archean and then fused with it to become one organism If such endosymbiosis was an important factor microbial mats would have encouraged it 2 There are two known variations of this scenario The boundary between the oxygenated and oxygen free zones of a mat would have moved up when photosynthesis shut down at night and back down when photosynthesis resumed after the next sunrise Symbiosis between independent aerobic and anaerobic organisms would have enabled both to live comfortably in the zone that was subject to oxygen tides and subsequent endosymbiosis would have made such partnerships more mobile 15 The initial partnership may have been between anaerobic archea that required molecular hydrogen H2 and heterotrophic bacteria that produced it and could live both with and without oxygen 15 24 Life on land Edit Microbial mats from 1 200 million years ago provide the first evidence of life in the terrestrial realm 25 The earliest multicellular animals Edit Before After Sessile organismanchored in mat Animal grazingon mat Animals embeddedin mat Animalsburrowingjust undermat Microbial mat Firm layered anoxic sulphidic substrate Animals moving on insurface of sea floor Loose oxygenatedupper substrate withburrowinganimals Before and after the Cambrian substrate revolution The Ediacara biota are the earliest widely accepted evidence of multicellular animals Most Ediacaran strata with the elephant skin texture characteristic of microbial mats contain fossils and Ediacaran fossils are hardly ever found in beds that do not contain these microbial mats 26 Adolf Seilacher categorized the animals as mat encrusters which were permanently attached to the mat mat scratchers which grazed the surface of the mat without destroying it mat stickers suspension feeders that were partially embedded in the mat and undermat miners which burrowed underneath the mat and fed on decomposing mat material 27 The Cambrian substrate revolution Edit In the Early Cambrian however organisms began to burrow vertically for protection or food breaking down the microbial mats and thus allowing water and oxygen to penetrate a considerable distance below the surface and kill the oxygen intolerant microorganisms in the lower layers As a result of this Cambrian substrate revolution marine microbial mats are confined to environments in which burrowing is non existent or negligible 28 very harsh environments such as hyper saline lagoons or brackish estuaries which are uninhabitable for the burrowing organisms that broke up the mats 29 rocky floors which the burrowers cannot penetrate 28 the depths of the oceans where burrowing activity today is at a similar level to that in the shallow coastal seas before the revolution 28 Current status Edit Although the Cambrian substrate revolution opened up new niches for animals it was not catastrophic for microbial mats but it did greatly reduce their extent How microbial mats help paleontologists EditMost fossils preserve only the hard parts of organisms e g shells The rare cases where soft bodied fossils are preserved the remains of soft bodied organisms and also of the soft parts of organisms for which only hard parts such as shells are usually found are extremely valuable because they provide information about organisms that are hardly ever fossilized and much more information than is usually available about those for which only the hard parts are usually preserved 30 Microbial mats help to preserve soft bodied fossils by Capturing corpses on the sticky surfaces of mats and thus preventing them from floating or drifting away 30 Physically protecting them from being eaten by scavengers and broken up by burrowing animals and protecting fossil bearing sediments from erosion For example the speed of water current required to erode sediment bound by a mat is 20 30 times as great as the speed required to erode a bare sediment 30 Preventing or reducing decay both by physically screening the remains from decay causing bacteria and by creating chemical conditions that are hostile to decay causing bacteria 30 Preserving tracks and burrows by protecting them from erosion 30 Many trace fossils date from significantly earlier than the body fossils of animals that are thought to have been capable of making them and thus improve paleontologists estimates of when animals with these capabilities first appeared 31 Industrial uses EditThe ability of microbial mat communities to use a vast range of foods has recently led to interest in industrial uses There have been trials of microbial mats for purifying water both for human use and in fish farming 32 33 and studies of their potential for cleaning up oil spills 34 As a result of the growing commercial potential there have been applications for and grants of patents relating to the growing installation and use of microbial mats mainly for cleaning up pollutants and waste products 35 See also EditBiological soil crust Cambrian substrate revolution Cyanobacteria Ediacaran type preservation Evolutionary history of life Sippewissett Microbial MatNotes Edit Schieber J Bose P Eriksson P G Banerjee S Sarkar S Altermann W Catuneanu O 2007 Atlas of Microbial Mat Features Preserved within the Siliciclastic Rock Record Elsevier ISBN 978 0 444 52859 9 Retrieved 2008 07 01 a b Nobs Stephanie Jane MacLeod Fraser I Wong Hon Lun Burns Brendan P 2022 05 01 Eukarya the chimera eukaryotes a secondary innovation of the two domains of life Trends in Microbiology 30 5 421 431 doi 10 1016 j tim 2021 11 003 ISSN 0966 842X PMID 34863611 S2CID 244823103 a b c d e f g h i j Krumbein W E Brehm U Gerdes G Gorbushina A A Levit G Palinska K A 2003 Biofilm Biodictyon Biomat Microbialites Oolites Stromatolites Geophysiology Global Mechanism Parahistology In Krumbein W E Paterson D M Zavarzin G A eds Fossil and Recent Biofilms A Natural History of Life on Earth PDF Kluwer Academic pp 1 28 ISBN 978 1 4020 1597 7 Archived from the original PDF on January 6 2007 Retrieved 2008 07 09 Nielsen L Risgaard Petersen N Fossing H Christensen P Sayama M 2010 Electric currents couple spatially separated biogeochemical processes in marine sediment Nature 463 7284 1071 1074 Bibcode 2010Natur 463 1071N doi 10 1038 nature08790 PMID 20182510 S2CID 205219761 Katharine Sanderson 24 February 2010 Bacteria buzzing in the seabed Nature News doi 10 1038 news 2010 90 Risatti J B Capman W C Stahl D A October 11 1994 Community structure of a microbial mat the phylogenetic dimension Proceedings of the National Academy of Sciences 91 21 10173 7 Bibcode 1994PNAS 9110173R doi 10 1073 pnas 91 21 10173 PMC 44980 PMID 7937858 Lucas J Stal Physiological ecology of cyanobacteria in microbial mats and other communities New Phytologist 1995 131 1 32 a b Garcia Pichel F Mechling M Castenholz R W Diel Migrations of Microorganisms within a Benthic Hypersaline Mat Community Appl and Env Microbiology May 1994 pp 1500 1511 Bebout B M Garcia Pichel F UV B Induced Vertical Migrations of Cyanobacteria in a Microbial Mat Appl Environ Microbiol Dec 1995 4215 4222 Vol 61 No 12 Che L M Andrefouet S Bothorel V Guezennec M Rougeaux H Guezennec J Deslandes E Trichet J Matheron R Le Campion T Payri C Caumette P 2001 Physical chemical and microbiological characteristics of microbial mats KOPARA in the South Pacific atolls of French Polynesia Canadian Journal of Microbiology 47 11 994 1012 doi 10 1139 cjm 47 11 994 PMID 11766060 Retrieved 2008 07 18 permanent dead link Temara A de Ridder C Kuenen J G Robertson L A February 1993 Sulfide oxidizing bacteria in the burrowing echinoid Echinocardium cordatum Echinodermata Marine Biology 115 2 179 doi 10 1007 BF00346333 S2CID 85351601 Porada H Ghergut J Bouougri El H 2008 Kinneyia Type Wrinkle Structures Critical Review And Model Of Formation PALAIOS 23 2 65 77 Bibcode 2008Palai 23 65P doi 10 2110 palo 2006 p06 095r S2CID 128464944 a b Manten A A 1966 Some problematic shallow marine structures Marine Geol 4 3 227 232 Bibcode 1966MGeol 4 227M doi 10 1016 0025 3227 66 90023 5 hdl 1874 16526 S2CID 129854399 Archived from the original on 2008 10 21 Retrieved 2007 06 18 Borenstein Seth 13 November 2013 Oldest fossil found Meet your microbial mom AP News Retrieved 15 November 2013 Noffke Nora Christian Christian Wacey David Hazen Robert M 8 November 2013 Microbially Induced Sedimentary Structures Recording an Ancient Ecosystem in the ca 3 48 Billion Year Old Dresser Formation Pilbara Western Australia Astrobiology 13 12 1103 24 Bibcode 2013AsBio 13 1103N doi 10 1089 ast 2013 1030 PMC 3870916 PMID 24205812 a b c d e f g h i j k Nisbet E G amp Fowler C M R December 7 1999 Archaean metabolic evolution of microbial mats Proceedings of the Royal Society B 266 1436 2375 doi 10 1098 rspb 1999 0934 PMC 1690475 abstract with link to free full content PDF Schopf J W 1992 Geology and Paleobiology of the Archean Earth In Schopf J W Klein C eds The Proterozoic Biosphere A Multidisciplinary Study Cambridge University Press ISBN 978 0 521 36615 1 Retrieved 2008 07 17 a b Blankenship R E 1 January 2001 Molecular evidence for the evolution of photosynthesis Trends in Plant Science 6 1 4 6 doi 10 1016 S1360 1385 00 01831 8 PMID 11164357 a b Abele D 7 November 2002 Toxic oxygen The radical life giver PDF Nature 420 27 27 Bibcode 2002Natur 420 27A doi 10 1038 420027a PMID 12422197 S2CID 4317378 a b Hoehler T M Bebout B M Des Marais D J 19 July 2001 The role of microbial mats in the production of reduced gases on the early Earth Nature 412 6844 324 7 Bibcode 2001Natur 412 324H doi 10 1038 35085554 PMID 11460161 S2CID 4365775 Introduction to Aerobic Respiration University of California Davis Archived from the original on September 8 2008 Retrieved 2008 07 14 Hedges S B Blair J E Venturi M L Shoe J L 28 January 2004 A molecular timescale of eukaryote evolution and the rise of complex multicellular life BMC Evolutionary Biology 4 2 doi 10 1186 1471 2148 4 2 PMC 341452 PMID 15005799 Knoll Andrew H Javaux E J Hewitt D Cohen P 2006 Eukaryotic organisms in Proterozoic oceans Philosophical Transactions of the Royal Society B 361 1470 1023 38 doi 10 1098 rstb 2006 1843 PMC 1578724 PMID 16754612 Brocks J J Logan G A Buick R Summons R E 13 August 1999 Archean Molecular Fossils and the Early Rise of Eukaryotes Science 285 5430 1033 6 Bibcode 1999Sci 285 1033B CiteSeerX 10 1 1 516 9123 doi 10 1126 science 285 5430 1033 PMID 10446042 Martin W amp Muller M March 1998 The hydrogen hypothesis for the first eukaryote Nature 392 6671 37 41 Bibcode 1998Natur 392 37M doi 10 1038 32096 PMID 9510246 S2CID 338885 Retrieved 2008 07 16 Prave A R 2002 Life on land in the Proterozoic Evidence from the Torridonian rocks of northwest Scotland Geology 30 9 811 812 Bibcode 2002Geo 30 811P doi 10 1130 0091 7613 2002 030 lt 0811 LOLITP gt 2 0 CO 2 ISSN 0091 7613 Runnegar B N Fedonkin M A 1992 Proterozoic metazoan body fossils In Schopf W J Klein C eds The Proterozoic biosphere The Proterozoic Biosphere A Multidisciplinary Study Cambridge University Press New York Cambridge University Press pp 369 388 ISBN 978 0 521 36615 1 Seilacher A 1999 Biomat related lifestyles in the Precambrian PALAIOS 14 1 86 93 Bibcode 1999Palai 14 86S doi 10 2307 3515363 JSTOR 3515363 Retrieved 2008 07 17 a b c Bottjer D J Hagadorn J W Dornbos S Q The Cambrian substrate revolution PDF Amherst College Archived from the original PDF on 2006 09 09 Retrieved 2008 06 28 Seilacher Adolf Luis A Buatoisb M Gabriela Mangano 2005 10 07 Trace fossils in the Ediacaran Cambrian transition Behavioral diversification ecological turnover and environmental shift Palaeogeography Palaeoclimatology Palaeoecology 227 4 323 56 Bibcode 2005PPP 227 323S doi 10 1016 j palaeo 2005 06 003 a b c d e Briggs D E G 2003 The role of biofilms in the fossilization of non biomineralized tissues In Krumbein W E Paterson D M Zavarzin G A eds Fossil and Recent Biofilms A Natural History of Life on Earth Kluwer Academic pp 281 290 ISBN 978 1 4020 1597 7 Retrieved 2008 07 09 Seilacher A 1994 How valid is Cruziana Stratigraphy International Journal of Earth Sciences 83 4 752 8 Bibcode 1994GeoRu 83 752S doi 10 1007 BF00251073 S2CID 129504434 Potts D A Patenaude E L Gorres J H Amador J A Wastewater Renovation and Hydraulic Performance of a Low Profile Leaching System PDF GeoMatrix Inc Retrieved 2008 07 17 dead link Bender J August 2004 A waste effluent treatment system based on microbial mats for black sea bass Centropristis striata recycled water mariculture Aquacultural Engineering 31 1 2 73 82 doi 10 1016 j aquaeng 2004 02 001 Retrieved 2008 07 17 Role of microbial mats in bioremediation of hydrocarbon polluted coastal zones ISTworld Archived from the original on 2011 07 23 Retrieved 2008 07 17 Compositions and methods of use of constructed microbial mats United States Patent 6033559 Retrieved 2008 07 17 Silage microbial mat system and method United States Patent 5522985 Retrieved 2008 07 17 GeoMat GeoMatrix Inc Retrieved 2008 07 17 dead link cites U S Patents 7351005 and 7374670References EditSeckbach S 2010 Microbial Mats Modern and Ancient Microorganisms in Stratified Systems Springer ISBN 978 90 481 3798 5 External links EditJurgen Schieber Microbial Mat Page Retrieved 2008 07 01 outline of microbial mats and pictures of mats in various situations and at various magnifications Retrieved from https en wikipedia org w index php title Microbial mat amp oldid 1128304848, 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