^Chen, Jim X. (2008), Springer (ed.), Guide to Graphics Software Tools, p. 471, ISBN978-1-84800-900-4
^ abHerráez, A (2006), "Biomolecules in the Computer: Jmol to the Rescue", Biochemistry and Molecular Biology Education, 34 (4): 255–61, doi:10.1002/bmb.2006.494034042644, PMID 21638687, S2CID 36319720
^Herráez, A (2007), Lulu (ed.), How to Use Jmol to Study and Present Molecular Structures, Volume 1, p. 21, ISBN978-1-84799-259-8
^. Archived from the original on 2018-01-01. Retrieved 2015-11-02.
External links
Wikimedia Commons has media related to Jmol.
Official website
with listings of , , and
Willighagen, Egon; Howard, Miguel (June 2007). "Fast and Scriptable Molecular Graphics in Web Browsers without Java3D". Nature Precedings. doi:10.1038/npre.2007.50.1.
Jmol extension for MediaWiki
Biomodel
Molview
July 14, 2023
jmol, legal, procedure, judgment, matter, computer, software, molecular, modelling, chemical, structures, dimensions, returns, representation, molecule, that, used, teaching, tool, research, chemistry, biochemistry, written, programming, language, java, operat. For the legal procedure see judgment as a matter of law Jmol is computer software for molecular modelling chemical structures in 3 dimensions 3 Jmol returns a 3D representation of a molecule that may be used as a teaching tool 4 or for research e g in chemistry and biochemistry It is written in the programming language Java so it can run on the operating systems Windows macOS Linux and Unix if Java is installed It is free and open source software released under a GNU Lesser General Public License LGPL version 2 0 A standalone application and a software development kit SDK exist that can be integrated into other Java applications such as Bioclipse and Taverna JmolJmol three dimensional structure rendering of streptavidinDeveloper s Jmol development teamInitial release2001 22 years ago 2001 Stable release14 31 34 1 7 March 2021 2 years ago 7 March 2021 Repositorysourceforge wbr net wbr projects wbr jmolWritten inJavaOperating systemCross platformPlatformSystems with Java and Web browsers without JavaAvailable in16 languagesList of languagesCatalan Chinese Czech Danish Dutch English French German Hungarian Indonesian Italian Korean Portuguese Spanish Turkish Ukrainian 2 TypeMolecular modellingLicenseLGPL 2 0Websitewww wbr jmol wbr orgA popular feature is an applet that can be integrated into web pages to display molecules in a variety of ways For example molecules can be displayed as ball and stick models space filling models ribbon diagrams etc 5 Jmol supports a wide range of chemical file formats including Protein Data Bank pdb Crystallographic Information File cif MDL Molfile mol and Chemical Markup Language CML There is also a JavaScript only HTML5 version JSmol that can be used on computers with no Java 6 The Jmol applet among other abilities offers an alternative to the Chime plug in 4 which is no longer under active development While Jmol has many features that Chime lacks it does not claim to reproduce all Chime functions most notably the Sculpt mode Chime requires plug in installation and Internet Explorer 6 0 or Firefox 2 0 on Microsoft Windows or Netscape Communicator 4 8 on Mac OS 9 Jmol requires Java installation and operates on a wide variety of platforms For example Jmol is fully functional in Mozilla Firefox Internet Explorer Opera Google Chrome and Safari Screenshots Edit Crystal structure of an H ACA box RNP from Pyrococcus furiosus Highlighting two salt bridges in hemoglobin tetramer hemo group as sticks at bottom right A fragment of transcription factor TFIIIA forming three consecutive zinc finger motifs bound to a stretch of DNA Eubacterial 70S Ribosome from Thermus thermophilus See also Edit Free and open source software portalChemistry Development Kit CDK Comparison of software for molecular mechanics modeling List of free and open source software packages List of molecular graphics systems Molecular graphics Molecule editor Proteopedia PyMOL SAMSON SMILESReferences Edit Error Unable to display the reference properly See the documentation for details Jmol translations Chen Jim X 2008 Springer ed Guide to Graphics Software Tools p 471 ISBN 978 1 84800 900 4 a b Herraez A 2006 Biomolecules in the Computer Jmol to the Rescue Biochemistry and Molecular Biology Education 34 4 255 61 doi 10 1002 bmb 2006 494034042644 PMID 21638687 S2CID 36319720 Herraez A 2007 Lulu ed How to Use Jmol to Study and Present Molecular Structures Volume 1 p 21 ISBN 978 1 84799 259 8 JSmol Archived from the original on 2018 01 01 Retrieved 2015 11 02 External links Edit Wikimedia Commons has media related to Jmol Official website Wiki with listings of websites wikis and moodles Willighagen Egon Howard Miguel June 2007 Fast and Scriptable Molecular Graphics in Web Browsers without Java3D Nature Precedings doi 10 1038 npre 2007 50 1 Jmol extension for MediaWiki Biomodel Molview Retrieved from https en wikipedia org w index php title Jmol amp oldid 1157036056, wikipedia, wiki, book, books, library,