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Wikipedia

Transcription termination factor, RNA polymerase I

January 01, 1970

Not to be confused with thyroid transcription factor 1.

Transcription termination factor 1 is a protein that in humans is encoded by the TTF1 gene.[5][6]

TTF1
Identifiers
AliasesTTF1, TTF-1, TTF-I, Transcription termination factor, RNA polymerase I, transcription termination factor 1
External IDsOMIM: 600777; MGI: 105044; HomoloGene: 135863; GeneCards: TTF1; OMA:TTF1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez

7270

22130

Ensembl

ENSG00000125482

ENSMUSG00000026803

UniProt

Q15361

Q62187

RefSeq (mRNA)

NM_001205296
NM_007344

NM_009442

RefSeq (protein)

NP_001192225
NP_031370

NP_033468

Location (UCSC)Chr 9: 132.38 – 132.41 MbChr 2: 28.95 – 28.98 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse


References edit

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000125482 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026803 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Evers R, Grummt I (Aug 1995). "Molecular coevolution of mammalian ribosomal gene terminator sequences and the transcription termination factor TTF-I". Proc Natl Acad Sci U S A. 92 (13): 5827–31. Bibcode:1995PNAS...92.5827E. doi:10.1073/pnas.92.13.5827. PMC 41594. PMID 7597036.
  6. ^ "Entrez Gene: TTF1 transcription termination factor, RNA polymerase I".

Further reading edit

  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Jansa P, Mason SW, Hoffmann-Rohrer U, Grummt I (1998). "Cloning and functional characterization of PTRF, a novel protein which induces dissociation of paused ternary transcription complexes". EMBO J. 17 (10): 2855–64. doi:10.1093/emboj/17.10.2855. PMC 1170626. PMID 9582279.
  • Muth V, Nadaud S, Grummt I, Voit R (2001). "Acetylation of TAF(I)68, a subunit of TIF-IB/SL1, activates RNA polymerase I transcription". EMBO J. 20 (6): 1353–62. doi:10.1093/emboj/20.6.1353. PMC 145524. PMID 11250901.
  • Strohner R, Nemeth A, Jansa P, et al. (2001). "NoRC--a novel member of mammalian ISWI-containing chromatin remodeling machines". EMBO J. 20 (17): 4892–900. doi:10.1093/emboj/20.17.4892. PMC 125270. PMID 11532953.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Humphray SJ, Oliver K, Hunt AR, et al. (2004). "DNA sequence and analysis of human chromosome 9". Nature. 429 (6990): 369–74. Bibcode:2004Natur.429..369H. doi:10.1038/nature02465. PMC 2734081. PMID 15164053.
  • Colland F, Jacq X, Trouplin V, et al. (2004). "Functional proteomics mapping of a human signaling pathway". Genome Res. 14 (7): 1324–32. doi:10.1101/gr.2334104. PMC 442148. PMID 15231748.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Nousiainen M, Silljé HH, Sauer G, et al. (2006). "Phosphoproteome analysis of the human mitotic spindle". Proc. Natl. Acad. Sci. U.S.A. 103 (14): 5391–6. Bibcode:2006PNAS..103.5391N. doi:10.1073/pnas.0507066103. PMC 1459365. PMID 16565220.
  • Takano T, Ito Y, Matsuzuka F, et al. (2007). "Quantitative measurement of telomerase reverse transcriptase, thyroglobulin and thyroid transcription factor 1 mRNAs in anaplastic thyroid carcinoma tissues and cell lines". Oncol. Rep. 18 (3): 715–20. doi:10.3892/or.18.3.715. PMID 17671725.


 

This article on a gene on human chromosome 9 is a stub. You can help Wikipedia by expanding it.

January 01, 1970
transcription, termination, factor, polymerase, confused, with, thyroid, transcription, factor, transcription, termination, factor, protein, that, humans, encoded, ttf1, gene, ttf1identifiersaliasesttf1, transcription, termination, factor, 1external, idsomim, . Not to be confused with thyroid transcription factor 1 Transcription termination factor 1 is a protein that in humans is encoded by the TTF1 gene 5 6 TTF1IdentifiersAliasesTTF1 TTF 1 TTF I Transcription termination factor RNA polymerase I transcription termination factor 1External IDsOMIM 600777 MGI 105044 HomoloGene 135863 GeneCards TTF1 OMA TTF1 orthologsGene location Human Chr Chromosome 9 human 1 Band9q34 13Start132 375 548 bp 1 End132 406 851 bp 1 Gene location Mouse Chr Chromosome 2 mouse 2 Band2 2 A3Start28 950 274 bp 2 End28 977 668 bp 2 RNA expression patternBgeeHumanMouse ortholog Top expressed intrabecular boneoocytesecondary oocytepyloruspericardiumcardianipplesuperior surface of tonguevena cavaponsTop expressed insubmandibular glandspermatocytePaneth cellthymusmorularenal corpusclecrypt of lieberkuhn of small intestinespleenyolk sacfemale urethraMore reference expression dataBioGPSMore reference expression dataGene ontologyMolecular functionDNA binding DNA binding transcription factor activity RNA polymerase II specific sequence specific DNA binding chromatin bindingCellular componentplasma membrane nucleolus nucleoplasm cytosol nucleusBiological processDNA templated transcription termination negative regulation of DNA replication regulation of transcription DNA templated transcription DNA templated regulation of transcription by RNA polymerase II cell differentiation termination of RNA polymerase I transcriptionSources Amigo QuickGOOrthologsSpeciesHumanMouseEntrez727022130EnsemblENSG00000125482ENSMUSG00000026803UniProtQ15361Q62187RefSeq mRNA NM 001205296NM 007344NM 009442RefSeq protein NP 001192225NP 031370NP 033468Location UCSC Chr 9 132 38 132 41 MbChr 2 28 95 28 98 MbPubMed search 3 4 WikidataView Edit HumanView Edit MouseReferences edit a b c GRCh38 Ensembl release 89 ENSG00000125482 Ensembl May 2017 a b c GRCm38 Ensembl release 89 ENSMUSG00000026803 Ensembl May 2017 Human PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Mouse PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Evers R Grummt I Aug 1995 Molecular coevolution of mammalian ribosomal gene terminator sequences and the transcription termination factor TTF I Proc Natl Acad Sci U S A 92 13 5827 31 Bibcode 1995PNAS 92 5827E doi 10 1073 pnas 92 13 5827 PMC 41594 PMID 7597036 Entrez Gene TTF1 transcription termination factor RNA polymerase I Further reading editMaruyama K Sugano S 1994 Oligo capping a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides Gene 138 1 2 171 4 doi 10 1016 0378 1119 94 90802 8 PMID 8125298 Bonaldo MF Lennon G Soares MB 1997 Normalization and subtraction two approaches to facilitate gene discovery Genome Res 6 9 791 806 doi 10 1101 gr 6 9 791 PMID 8889548 Suzuki Y Yoshitomo Nakagawa K Maruyama K et al 1997 Construction and characterization of a full length enriched and a 5 end enriched cDNA library Gene 200 1 2 149 56 doi 10 1016 S0378 1119 97 00411 3 PMID 9373149 Jansa P Mason SW Hoffmann Rohrer U Grummt I 1998 Cloning and functional characterization of PTRF a novel protein which induces dissociation of paused ternary transcription complexes EMBO J 17 10 2855 64 doi 10 1093 emboj 17 10 2855 PMC 1170626 PMID 9582279 Muth V Nadaud S Grummt I Voit R 2001 Acetylation of TAF I 68 a subunit of TIF IB SL1 activates RNA polymerase I transcription EMBO J 20 6 1353 62 doi 10 1093 emboj 20 6 1353 PMC 145524 PMID 11250901 Strohner R Nemeth A Jansa P et al 2001 NoRC a novel member of mammalian ISWI containing chromatin remodeling machines EMBO J 20 17 4892 900 doi 10 1093 emboj 20 17 4892 PMC 125270 PMID 11532953 Strausberg RL Feingold EA Grouse LH et al 2003 Generation and initial analysis of more than 15 000 full length human and mouse cDNA sequences Proc Natl Acad Sci U S A 99 26 16899 903 Bibcode 2002PNAS 9916899M doi 10 1073 pnas 242603899 PMC 139241 PMID 12477932 Humphray SJ Oliver K Hunt AR et al 2004 DNA sequence and analysis of human chromosome 9 Nature 429 6990 369 74 Bibcode 2004Natur 429 369H doi 10 1038 nature02465 PMC 2734081 PMID 15164053 Colland F Jacq X Trouplin V et al 2004 Functional proteomics mapping of a human signaling pathway Genome Res 14 7 1324 32 doi 10 1101 gr 2334104 PMC 442148 PMID 15231748 Gerhard DS Wagner L Feingold EA et al 2004 The status quality and expansion of the NIH full length cDNA project the Mammalian Gene Collection MGC Genome Res 14 10B 2121 7 doi 10 1101 gr 2596504 PMC 528928 PMID 15489334 Nousiainen M Sillje HH Sauer G et al 2006 Phosphoproteome analysis of the human mitotic spindle Proc Natl Acad Sci U S A 103 14 5391 6 Bibcode 2006PNAS 103 5391N doi 10 1073 pnas 0507066103 PMC 1459365 PMID 16565220 Takano T Ito Y Matsuzuka F et al 2007 Quantitative measurement of telomerase reverse transcriptase thyroglobulin and thyroid transcription factor 1 mRNAs in anaplastic thyroid carcinoma tissues and cell lines Oncol Rep 18 3 715 20 doi 10 3892 or 18 3 715 PMID 17671725 nbsp This article on a gene on human chromosome 9 is a stub You can help Wikipedia by expanding it vte Retrieved from https en wikipedia org w index php title Transcription termination factor RNA polymerase I amp oldid 1116740757, wikipedia, wiki, book, books, library,

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