OMA (Orthologous MAtrix) is a database of orthologs extracted from available complete genomes.[1][2] The orthology predictions of OMA are available in several forms:
OMA Pairs: for a given gene, a list of predicted orthologs in other species is provided.
OMA Groups: a set of genes across different species which are all orthologous.
OMA Hierarchical Groups: the set of all genes that have evolved from a single ancestral gene in a given taxonomic range.
OMA Genome Pair view: the list of all predicted orthologs between two species.
^Altenhoff, Adrian M; Glover, Natasha M; Train, Clément-Marie; Kaleb, Klara; Warwick Vesztrocy, Alex; Dylus, David; de Farias, Tarcisio M; Zile, Karina; Stevenson, Charles; Long, Jiao; Redestig, Henning; Gonnet, Gaston H; Dessimoz, Christophe (2018). "The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces". Nucleic Acids Research. 46 (D1): D477–D485. doi:10.1093/nar/gkx1019. ISSN 0305-1048. PMC5753216. PMID 29106550.
orthologous, matrix, database, orthologs, extracted, from, available, complete, genomes, orthology, predictions, available, several, forms, pairs, given, gene, list, predicted, orthologs, other, species, provided, groups, genes, across, different, species, whi. OMA Orthologous MAtrix is a database of orthologs extracted from available complete genomes 1 2 The orthology predictions of OMA are available in several forms OMA Pairs for a given gene a list of predicted orthologs in other species is provided OMA Groups a set of genes across different species which are all orthologous OMA Hierarchical Groups the set of all genes that have evolved from a single ancestral gene in a given taxonomic range OMA Genome Pair view the list of all predicted orthologs between two species OMAContentDescriptionorthology inference among 1000 complete genomes ContactLaboratoryETH ZurichAuthorsChristophe DessimozAdrian SchneiderAdrian AltenhoffGaston H GonnetPrimary citationAltenhoff et al 1 Release date2004AccessWebsiteomabrowser wbr orgDownload URLhttp omabrowser org All download htmlWeb service URLwsdlMiscellaneousData releasefrequency2 releases per yearSee also editHomology biology OrthoDB TreeFamReferences edit a b Altenhoff Adrian M Schneider Adrian Gonnet Gaston H Dessimoz Christophe Jan 2011 OMA 2011 orthology inference among 1000 complete genomes Nucleic Acids Res 39 Database issue England D289 94 doi 10 1093 nar gkq1238 PMC 3013747 PMID 21113020 Altenhoff Adrian M Glover Natasha M Train Clement Marie Kaleb Klara Warwick Vesztrocy Alex Dylus David de Farias Tarcisio M Zile Karina Stevenson Charles Long Jiao Redestig Henning Gonnet Gaston H Dessimoz Christophe 2018 The OMA orthology database in 2018 retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces Nucleic Acids Research 46 D1 D477 D485 doi 10 1093 nar gkx1019 ISSN 0305 1048 PMC 5753216 PMID 29106550 nbsp This Biological database related article is a stub You can help Wikipedia by expanding it vte Retrieved from https en wikipedia org w index php title Orthologous MAtrix amp oldid 1064272763, wikipedia, wiki, book, books, library,
