Neoaves is a clade that consists of all modern birds (Neornithes or Aves) with the exception of Palaeognathae (ratites and kin) and Galloanserae (ducks, chickens and kin).[4] Almost 95% of the roughly 10,000 known species of extant birds belong to the Neoaves.[5]
The early diversification of the various neoavian groups occurred very rapidly around the Cretaceous–Paleogene extinction event,[6][7] and attempts to resolve their relationships with each other have resulted initially in much controversy.[8][9]
Phylogenyedit
The early diversification of the various neoavian groups occurred very rapidly around the Cretaceous–Paleogene extinction event.[10] As a result of the rapid radiation, attempts to resolve their relationships have produced conflicting results, some quite controversial, especially in the earlier studies.[11][12][13] Nevertheless, some recent large phylogenomic studies of Neoaves have led to much progress on defining orders and supraordinal groups within Neoaves. Still, the studies have failed to produce to a consensus on an overall high order topology of these groups.[14][15][16][13] A genomic study of 48 taxa by Jarvis et al. (2014) divided Neoaves into two main clades, Columbea and Passerea, but an analysis of 198 taxa by Prum et al. (2015) recovered different groupings for the earliest split in Neoaves.[14][15] A reanalysis with an extended dataset by Reddy et al. (2017) suggested this was due to the type of sequence data, with coding sequences favouring the Prum topology.[16] The disagreement on topology even with large phylogenomic studies led Suh (2016) to propose a hard polytomy of nine clades as the base of Neoaves.[17] An analysis by Houde et al. (2019) recovered Columbea and a reduced hard polytomy of six clades within Passerea.[18]
Despite other disagreements, these studies do agree on a number of supraorderal groups, which Reddy et al. (2017) dubbed the "magnificent seven", which together with three "orphaned orders" make up Neoaves.[16] Significantly, they both include a large waterbird clade (Aequornithes) and a large landbird clade (Telluraves). The groups defined by Reddy et al. (2017) are as follows:
^Ksepka, Daniel T.; Stidham, Thomas A.; Williamson, Thomas E. (25 July 2017). "Early Paleocene landbird supports rapid phylogenetic and morphological diversification of crown birds after the K–Pg mass extinction". Proceedings of the National Academy of Sciences. 114 (30): 8047–8052. Bibcode:2017PNAS..114.8047K. doi:10.1073/pnas.1700188114. PMC5544281. PMID 28696285.
^ abKuhl., H.; Frankl-Vilches, C.; Bakker, A.; Mayr, G.; Nikolaus, G.; Boerno, S. T.; Klages, S.; Timmermann, B.; Gahr, M. (2021). "An unbiased molecular approach using 3'UTRs resolves the avian family-level tree of life". Molecular Biology and Evolution. 38: 108–127. doi:10.1093/molbev/msaa191. PMC7783168. PMID 32781465.
^Field, Daniel J.; Benito, Juan; Chen, Albert; Jagt, John W. M.; Ksepka, Daniel T. (March 2020). "Late Cretaceous neornithine from Europe illuminates the origins of crown birds". Nature. 579 (7799): 397–401. Bibcode:2020Natur.579..397F. doi:10.1038/s41586-020-2096-0. ISSN 0028-0836. PMID 32188952. S2CID 212937591.
^ abJarvis, E. D.; et al. (2014). "Whole-genome analyses resolve early branches in the tree of life of modern birds". Science. 346 (6215): 1320–1331. Bibcode:2014Sci...346.1320J. doi:10.1126/science.1253451. ISSN 0036-8075. PMC4405904. PMID 25504713.
^Ericson, Per G.P.; et al. (2006). (PDF). Biology Letters. 2 (4): 543–547. doi:10.1098/rsbl.2006.0523. PMC1834003. PMID 17148284. Archived from the original (PDF) on 2009-03-25. Retrieved 2019-08-29.
^McCormack, J.E.; et al. (2013). "A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing". PLOS ONE. 8 (1): e54848. arXiv:1210.1604. Bibcode:2013PLoSO...854848M. doi:10.1371/journal.pone.0054848. PMC3558522. PMID 23382987.
^Claramunt, S.; Cracraft, J. (2015). "A new time tree reveals Earth history's imprint on the evolution of modern birds". Sci Adv. 1 (11): e1501005. Bibcode:2015SciA....1E1005C. doi:10.1126/sciadv.1501005. PMC4730849. PMID 26824065.
^Mayr, G (2011). "Metaves, Mirandornithes, Strisores and other novelties - a critical review of the higher-level phylogeny of neornithine birds". J Zool Syst Evol Res. 49: 58–76. doi:10.1111/j.1439-0469.2010.00586.x.
^Claramunt, S.; Cracraft, J. (2015). "A new time tree reveals Earth history's imprint on the evolution of modern birds". Sci Adv. 1 (11): e1501005. Bibcode:2015SciA....1E1005C. doi:10.1126/sciadv.1501005. PMC4730849. PMID 26824065.
^Mayr, G (2011). "Metaves, Mirandornithes, Strisores and other novelties - a critical review of the higher-level phylogeny of neornithine birds". J Zool Syst Evol Res. 49: 58–76. doi:10.1111/j.1439-0469.2010.00586.x.
^ abBraun, Edward L.; Cracraft, Joel; Houde, Peter (2019). "Resolving the Avian Tree of Life from Top to Bottom: The Promise and Potential Boundaries of the Phylogenomic Era". Avian Genomics in Ecology and Evolution. pp. 151–210. doi:10.1007/978-3-030-16477-5_6. ISBN978-3-030-16476-8. S2CID 198399272.
^ abJarvis, E.D.; et al. (2014). "Whole-genome analyses resolve early branches in the tree of life of modern birds". Science. 346 (6215): 1320–1331. Bibcode:2014Sci...346.1320J. doi:10.1126/science.1253451. PMC4405904. PMID 25504713.
^ abPrum, Richard O.; Berv, Jacob S.; Dornburg, Alex; Field, Daniel J.; Townsend, Jeffrey P.; Lemmon, Emily Moriarty; Lemmon, Alan R. (2015). "A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing". Nature. 526 (7574): 569–573. Bibcode:2015Natur.526..569P. doi:10.1038/nature15697. ISSN 0028-0836. PMID 26444237. S2CID 205246158.
^ abcdReddy, Sushma; Kimball, Rebecca T.; Pandey, Akanksha; Hosner, Peter A.; Braun, Michael J.; Hackett, Shannon J.; Han, Kin-Lan; Harshman, John; Huddleston, Christopher J.; Kingston, Sarah; Marks, Ben D.; Miglia, Kathleen J.; Moore, William S.; Sheldon, Frederick H.; Witt, Christopher C.; Yuri, Tamaki; Braun, Edward L. (2017). "Why Do Phylogenomic Data Sets Yield Conflicting Trees? Data Type Influences the Avian Tree of Life more than Taxon Sampling". Systematic Biology. 66 (5): 857–879. doi:10.1093/sysbio/syx041. ISSN 1063-5157. PMID 28369655.
^ abSuh, Alexander (2016). "The phylogenomic forest of bird trees contains a hard polytomy at the root of Neoaves". Zoologica Scripta. 45: 50–62. doi:10.1111/zsc.12213. ISSN 0300-3256.
^ abHoude, Peter; Braun, Edward L.; Narula, Nitish; Minjares, Uriel; Mirarab, Siavash (2019). "Phylogenetic Signal of Indels and the Neoavian Radiation". Diversity. 11 (7): 108. doi:10.3390/d11070108. ISSN 1424-2818.
^Prum, R.O.; et al. (2015). "A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing". Nature. 526 (7574): 569–573. Bibcode:2015Natur.526..569P. doi:10.1038/nature15697. PMID 26444237. S2CID 205246158.
^Braun, Edward L.; Kimball, Rebecca T. (2021). "Data types and the phylogeny of Neoaves". Birds. 2 (1): 1–22. doi:10.3390/birds2010001.
^Wu, S.; Rheindt, F.E.; Zhang, J.; Wang, J.; Zhang, L.; Quan, C.; Zhiheng, L.; Wang, M.; Wu, F.; Qu, Y; Edwards, S.V.; Zhou, Z.; Liu, L. (2024). "Genomes, fossils, and the concurrent rise of modern birds and flowering plants in the Late Cretaceous". Proceedings of the National Academy of Sciences. 121 (8). doi:10.1073/pnas.2319696121. PMC10895254.
^Stiller, J.; Feng, S.; Chowdhury, A-A.; et al. (2024). "Complexity of avian evolution revealed by family-level genomes". Nature: in press. doi:10.1038/s41586-024-07323-1.
neoaves, clade, that, consists, modern, birds, neornithes, aves, with, exception, palaeognathae, ratites, galloanserae, ducks, chickens, almost, roughly, known, species, extant, birds, belong, neoavianstemporal, range, paleocene, holocene, preꞒ, possible, late. Neoaves is a clade that consists of all modern birds Neornithes or Aves with the exception of Palaeognathae ratites and kin and Galloanserae ducks chickens and kin 4 Almost 95 of the roughly 10 000 known species of extant birds belong to the Neoaves 5 NeoaviansTemporal range Paleocene Holocene 62 5 0 Ma 1 PreꞒ Ꞓ O S D C P T J K Pg N Possible Late Cretaceous origin based on molecular clock 2 3 Great crested grebe Podiceps cristatus House sparrow Passer domesticus Scientific classification Domain Eukaryota Kingdom Animalia Phylum Chordata Class Aves Infraclass Neognathae Clade NeoavesSibley et al 1988 Clades Charadriiformes Columbimorphae Gruiformes Mirandornithes Opisthocomiformes Otidimorphae Phaethoquornithes Strisores Telluraves The early diversification of the various neoavian groups occurred very rapidly around the Cretaceous Paleogene extinction event 6 7 and attempts to resolve their relationships with each other have resulted initially in much controversy 8 9 Phylogeny editThe early diversification of the various neoavian groups occurred very rapidly around the Cretaceous Paleogene extinction event 10 As a result of the rapid radiation attempts to resolve their relationships have produced conflicting results some quite controversial especially in the earlier studies 11 12 13 Nevertheless some recent large phylogenomic studies of Neoaves have led to much progress on defining orders and supraordinal groups within Neoaves Still the studies have failed to produce to a consensus on an overall high order topology of these groups 14 15 16 13 A genomic study of 48 taxa by Jarvis et al 2014 divided Neoaves into two main clades Columbea and Passerea but an analysis of 198 taxa by Prum et al 2015 recovered different groupings for the earliest split in Neoaves 14 15 A reanalysis with an extended dataset by Reddy et al 2017 suggested this was due to the type of sequence data with coding sequences favouring the Prum topology 16 The disagreement on topology even with large phylogenomic studies led Suh 2016 to propose a hard polytomy of nine clades as the base of Neoaves 17 An analysis by Houde et al 2019 recovered Columbea and a reduced hard polytomy of six clades within Passerea 18 Despite other disagreements these studies do agree on a number of supraorderal groups which Reddy et al 2017 dubbed the magnificent seven which together with three orphaned orders make up Neoaves 16 Significantly they both include a large waterbird clade Aequornithes and a large landbird clade Telluraves The groups defined by Reddy et al 2017 are as follows The magnificent seven supraordinal clades Telluraves landbirds Aequornithes waterbirds Phaethontimorphae sunbittern kagu and tropicbirds Otidimorphae turacos bustards and cuckoos Strisores nightjars swifts hummingbirds and allies Columbimorphae mesites sandgrouse and pigeons Mirandornithes flamingos and grebes The three orphaned orders Opisthocomiformes hoatzin Gruiformes cranes and rails Charadriiformes shorebirds gulls and alcids Comparison of different proposals for Neoavian radiationJarvis et al 2014 4 Columbea Mirandornithes flamingos grebes Columbimorphae pigeons mesites sandgrouse Passerea Otidae Otidimorphae cuckoos bustards turacos Strisores hummingbirds swifts nightbirds Gruae Opisthocomiformes hoatzin Gruimorphae Gruiformes cranes rails Charadriiformes shorebirds Phaethoquornithes Eurypgimorphae sunbittern kagu tropicbirds Aequornithes core waterbirds Telluraves Afroaves Australaves core landbirds Prum et al 2015 19 Strisores hummingbirds swifts nightbirds Columbaves Columbimorphae pigeons mesites sandgrouse Otidimorphae cuckoos bustards turacos Gruiformes cranes rails Aequorlitornithes Mirandornithes flamingoes grebes Charadriiformes shorebirds Phaethoquornithes Eurypgimorphae sunbittern kagu tropicbirds Aequornithes core waterbirds waterbirds Inopinaves Opisthocomiformes hoatzin Telluraves core landbirds Suh 2016 a hard polytomy 17 Mirandornithes flamingoes grebes Columbimorphae pigeons mesites sandgrouse Otidimorphae cuckoos bustards turacos Strisores hummingbirds swifts nightbirds Opisthocomiformes hoatzin Gruiformes cranes rails Charadriiformes shorebirds Phaethoquornithes Eurypgimorphae sunbittern kagu tropicbirds Aequornithes core waterbirds Telluraves Afroaves Australaves core landbirds Reddy et al 2017 16 Columbea Mirandornithes flamingos grebes Columbimorphae pigeons mesites sandgrouse Passerea Otidimorphae cuckoos bustards Gruiformes cranes rails Aequornithes core waterbirds Charadriiformes shorebirds Opisthocomiformes hoatzin Strisores hummingbirds swifts nightbirds Eurypygimorphae sunbittern kagu tropicbirds Telluraves core landbirds Turacos were recovered outside Otidimorphae as sister to GruiformesHoude et al 2019 polytomy in Passerea 18 Columbea Mirandornithes flamingos grebes Columbimorphae pigeons mesites sandgrouse Passerea Otidimorphae cuckoos bustards turacos Strisores hummingbirds swifts nightbirds Opisthocomiformes hoatzin Charadriiformes shorebirds Gruiformes cranes rails Phaethoquornithes Eurypygimorphae sunbittern kagu tropicbirds Aequornithes core waterbirds Telluraves core landbirds Kuhl et al 2021 2 Mirandornithes flamingos grebes Columbaves Columbimorphae pigeons sandgrouse mesites plus cuckoos Otidimorphae turacos bustards without cuckoos Strisores hummingbirds swifts nightbirds Opisthocomiformes hoatzin Gruimorphae Gruiformes cranes rails Charadriiformes shorebirds Phaethoquornithes Eurypygimorphae sunbittern kagu tropicbirds Aequornithes core waterbirds Telluraves core landbirds Braun amp Kimball 2021 soft polytomies at the base of Neoaves and in Passerea 20 Mirandornithes flamingos grebes Columbimorphae pigeons sandgrouse mesites Passerea Otidimorphae bustards and cuckoos without turacos Musophagiformes turacos Strisores hummingbirds swifts nightbirds Opisthocomiformes hoatzin Gruiformes cranes rails Charadriiformes shorebirds Phaethoquornithes Eurypygimorphae sunbittern kagu tropicbirds Aequornithes core waterbirds Telluraves core landbirds Wu et al 2024 21 Aquaterraves Columbaves Columbimorphae pigeons sandgrouse mesites Otidimorphae bustards turacos cuckoos Litusilvanae Strisores hummingbirds swifts nightbirds Gruimorphae Gruiformes cranes rails Charadriiformes shorebirds Cursorimorphae Aequorlitornithes Mirandornithes flamingos grebes Opisthocomiformes hoatzin Phaethoquornithes Eurypygimorphae sunbittern kagu tropicbirds Aequornithes core waterbirds Telluraves core landbirds Stiller et al 2024 22 Mirandornithes flamingos grebes Columbaves Columbimorphae pigeons sandgrouse mesites Otidimorphae bustards turacos cuckoos Elementaves Opisthocomiformes hoatzin Gruimorphae Gruiformes cranes rails Charadriiformes shorebirds Cursorimorphae Strisores hummingbirds swifts nightbirds Phaethoquornithes Eurypygimorphae sunbittern kagu tropicbirds Aequornithes core waterbirds Telluraves core landbirds The following cladogram illustrates the proposed relationships between all neoavian bird clades 23 Neoaves Mirandornithes Phoenicopteriformes flamingos nbsp Podicipediformes grebes nbsp Columbaves Columbimorphae Columbiformes pigeons and doves nbsp Mesitornithiformes mesites nbsp Pterocliformes sandgrouse nbsp Otidimorphae Cuculiformes cuckoos nbsp Otidiformes bustards nbsp Musophagiformes turacos nbsp Elementaves Opisthocomiformes hoatzin nbsp Gruimorphae Gruiformes rails and cranes nbsp Charadriiformes waders and relatives nbsp Strisores Caprimulgiformes nightjars nbsp Vanescaves Nyctibiiformes potoos nbsp Steatornithiformes oilbird nbsp Podargiformes frogmouths nbsp Daedalornithes Aegotheliformes owlet nightjars nbsp Apodiformes swifts treeswifts and hummingbirds nbsp Phaethoquornithes Eurypygimorphae Phaethontiformes tropicbirds nbsp Eurypygiformes sunbittern and kagu nbsp Aequornithes Gaviiformes loons nbsp Austrodyptornithes Procellariiformes albatrosses and petrels nbsp Sphenisciformes penguins nbsp Ciconiiformes storks nbsp Suliformes boobies cormorants etc nbsp Pelecaniformes pelicans herons and ibises nbsp Telluraves Afroaves Strigiformes owls nbsp Accipitrimorphae Cathartiformes New World vultures nbsp Accipitriformes hawks and relatives nbsp Coraciimorphae Coliiformes mousebirds nbsp Cavitaves Leptosomiformes cuckoo roller nbsp Trogoniformes trogons and quetzals nbsp Picocoraciae Bucerotiformes hornbills and relatives nbsp Picodynastornithes Coraciiformes kingfishers and relatives nbsp Piciformes woodpeckers and relatives nbsp Australaves Cariamiformes seriemas nbsp Eufalconimorphae Falconiformes falcons nbsp Psittacopasserae Psittaciformes parrots nbsp Passeriformes passerines nbsp References edit Ksepka Daniel T Stidham Thomas A Williamson Thomas E 25 July 2017 Early Paleocene landbird supports rapid phylogenetic and morphological diversification of crown birds after the K Pg mass extinction Proceedings of the National Academy of Sciences 114 30 8047 8052 Bibcode 2017PNAS 114 8047K doi 10 1073 pnas 1700188114 PMC 5544281 PMID 28696285 a b Kuhl H Frankl Vilches C Bakker A Mayr G Nikolaus G Boerno S T Klages S Timmermann B Gahr M 2021 An unbiased molecular approach using 3 UTRs resolves the avian family level tree of life Molecular Biology and Evolution 38 108 127 doi 10 1093 molbev msaa191 PMC 7783168 PMID 32781465 Field Daniel J Benito Juan Chen Albert Jagt John W M Ksepka Daniel T March 2020 Late Cretaceous neornithine from Europe illuminates the origins of crown birds Nature 579 7799 397 401 Bibcode 2020Natur 579 397F doi 10 1038 s41586 020 2096 0 ISSN 0028 0836 PMID 32188952 S2CID 212937591 a b Jarvis E D et al 2014 Whole genome analyses resolve early branches in the tree of life of modern birds Science 346 6215 1320 1331 Bibcode 2014Sci 346 1320J doi 10 1126 science 1253451 ISSN 0036 8075 PMC 4405904 PMID 25504713 Ericson Per G P et al 2006 Diversification of Neoaves integration of molecular sequence data and fossils PDF Biology Letters 2 4 543 547 doi 10 1098 rsbl 2006 0523 PMC 1834003 PMID 17148284 Archived from the original PDF on 2009 03 25 Retrieved 2019 08 29 McCormack J E et al 2013 A phylogeny of birds based on over 1 500 loci collected by target enrichment and high throughput sequencing PLOS ONE 8 1 e54848 arXiv 1210 1604 Bibcode 2013PLoSO 854848M doi 10 1371 journal pone 0054848 PMC 3558522 PMID 23382987 Claramunt S Cracraft J 2015 A new time tree reveals Earth history s imprint on the evolution of modern birds Sci Adv 1 11 e1501005 Bibcode 2015SciA 1E1005C doi 10 1126 sciadv 1501005 PMC 4730849 PMID 26824065 Mayr G 2011 Metaves Mirandornithes Strisores and other novelties a critical review of the higher level phylogeny of neornithine birds J Zool Syst Evol Res 49 58 76 doi 10 1111 j 1439 0469 2010 00586 x Matzke A et al 2012 Retroposon insertion patterns of neoavian birds strong evidence for an extensive incomplete lineage sorting era Mol Biol Evol Claramunt S Cracraft J 2015 A new time tree reveals Earth history s imprint on the evolution of modern birds Sci Adv 1 11 e1501005 Bibcode 2015SciA 1E1005C doi 10 1126 sciadv 1501005 PMC 4730849 PMID 26824065 Mayr G 2011 Metaves Mirandornithes Strisores and other novelties a critical review of the higher level phylogeny of neornithine birds J Zool Syst Evol Res 49 58 76 doi 10 1111 j 1439 0469 2010 00586 x Matzke A et al 2012 Retroposon insertion patterns of neoavian birds strong evidence for an extensive incomplete lineage sorting era Mol Biol Evol a b Braun Edward L Cracraft Joel Houde Peter 2019 Resolving the Avian Tree of Life from Top to Bottom The Promise and Potential Boundaries of the Phylogenomic Era Avian Genomics in Ecology and Evolution pp 151 210 doi 10 1007 978 3 030 16477 5 6 ISBN 978 3 030 16476 8 S2CID 198399272 a b Jarvis E D et al 2014 Whole genome analyses resolve early branches in the tree of life of modern birds Science 346 6215 1320 1331 Bibcode 2014Sci 346 1320J doi 10 1126 science 1253451 PMC 4405904 PMID 25504713 a b Prum Richard O Berv Jacob S Dornburg Alex Field Daniel J Townsend Jeffrey P Lemmon Emily Moriarty Lemmon Alan R 2015 A comprehensive phylogeny of birds Aves using targeted next generation DNA sequencing Nature 526 7574 569 573 Bibcode 2015Natur 526 569P doi 10 1038 nature15697 ISSN 0028 0836 PMID 26444237 S2CID 205246158 a b c d Reddy Sushma Kimball Rebecca T Pandey Akanksha Hosner Peter A Braun Michael J Hackett Shannon J Han Kin Lan Harshman John Huddleston Christopher J Kingston Sarah Marks Ben D Miglia Kathleen J Moore William S Sheldon Frederick H Witt Christopher C Yuri Tamaki Braun Edward L 2017 Why Do Phylogenomic Data Sets Yield Conflicting Trees Data Type Influences the Avian Tree of Life more than Taxon Sampling Systematic Biology 66 5 857 879 doi 10 1093 sysbio syx041 ISSN 1063 5157 PMID 28369655 a b Suh Alexander 2016 The phylogenomic forest of bird trees contains a hard polytomy at the root of Neoaves Zoologica Scripta 45 50 62 doi 10 1111 zsc 12213 ISSN 0300 3256 a b Houde Peter Braun Edward L Narula Nitish Minjares Uriel Mirarab Siavash 2019 Phylogenetic Signal of Indels and the Neoavian Radiation Diversity 11 7 108 doi 10 3390 d11070108 ISSN 1424 2818 Prum R O et al 2015 A comprehensive phylogeny of birds Aves using targeted next generation DNA sequencing Nature 526 7574 569 573 Bibcode 2015Natur 526 569P doi 10 1038 nature15697 PMID 26444237 S2CID 205246158 Braun Edward L Kimball Rebecca T 2021 Data types and the phylogeny of Neoaves Birds 2 1 1 22 doi 10 3390 birds2010001 Wu S Rheindt F E Zhang J Wang J Zhang L Quan C Zhiheng L Wang M Wu F Qu Y Edwards S V Zhou Z Liu L 2024 Genomes fossils and the concurrent rise of modern birds and flowering plants in the Late Cretaceous Proceedings of the National Academy of Sciences 121 8 doi 10 1073 pnas 2319696121 PMC 10895254 Stiller J Feng S Chowdhury A A et al 2024 Complexity of avian evolution revealed by family level genomes Nature in press doi 10 1038 s41586 024 07323 1 Stiller J Feng S Chowdhury AA et al Complexity of avian evolution revealed by family level genomes Nature 2024 https doi org 10 1038 s41586 024 07323 1 Retrieved from https en wikipedia org w index php title Neoaves amp oldid 1219242835, wikipedia, wiki, book, books, library,
