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Fitness (biology)

Fitness (often denoted or ω in population genetics models) is the quantitative representation of individual reproductive success. It is also equal to the average contribution to the gene pool of the next generation, made by the same individuals of the specified genotype or phenotype. Fitness can be defined either with respect to a genotype or to a phenotype in a given environment or time. The fitness of a genotype is manifested through its phenotype, which is also affected by the developmental environment. The fitness of a given phenotype can also be different in different selective environments.

With asexual reproduction, it is sufficient to assign fitnesses to genotypes. With sexual reproduction, recombination scrambles alleles into different genotypes every generation; in this case, fitness values can be assigned to alleles by averaging over possible genetic backgrounds. Natural selection tends to make alleles with higher fitness more common over time, resulting in Darwinian evolution.

The term "Darwinian fitness" can be used to make clear the distinction with physical fitness.[1] Fitness does not include a measure of survival or life-span; Herbert Spencer's well-known phrase "survival of the fittest" should be interpreted as: "Survival of the form (phenotypic or genotypic) that will leave the most copies of itself in successive generations."

Inclusive fitness differs from individual fitness by including the ability of an allele in one individual to promote the survival and/or reproduction of other individuals that share that allele, in preference to individuals with a different allele. One mechanism of inclusive fitness is kin selection.

Fitness as propensity

Fitness is often defined as a propensity or probability, rather than the actual number of offspring. For example, according to Maynard Smith, "Fitness is a property, not of an individual, but of a class of individuals—for example homozygous for allele A at a particular locus. Thus the phrase ’expected number of offspring’ means the average number, not the number produced by some one individual. If the first human infant with a gene for levitation were struck by lightning in its pram, this would not prove the new genotype to have low fitness, but only that the particular child was unlucky."[2]

Alternatively, "the fitness of the individual—having an array x of phenotypes—is the probability, s(x), that the individual will be included among the group selected as parents of the next generation."[3]

Models of fitness

In order to avoid the complications of sex and recombination, the concept of fitness is restricted to an asexual population without genetic recombination. Thus, fitnesses can be assigned directly to genotypes and measured. There are two commonly used measures of fitness – absolute fitness and relative fitness.

Absolute fitness

The absolute fitness ( ) of a genotype is defined as the proportional change in the abundance of that genotype over one generation attributable to selection. For example, if   is the abundance of a genotype in generation   in an infinitely large population (so that there is no genetic drift), and neglecting the change in genotype abundances due to mutations, then[4]

 .

An absolute fitness larger than 1 indicates growth in that genotype's abundance; an absolute fitness smaller than 1 indicates decline.

Relative fitness

Whereas absolute fitness determines changes in genotype abundance, relative fitness ( ) determines changes in genotype frequency. If   is the total population size in generation  , and the relevant genotype's frequency is  , then

 ,

where   is the mean relative fitness in the population (again setting aside changes in frequency due to drift and mutation). Relative fitnesses only indicate the change in prevalence of different genotypes relative to each other, and so only their values relative to each other are important; relative fitnesses can be any nonnegative number, including 0. It is often convenient to choose one genotype as a reference and set its relative fitness to 1. Relative fitness is used in the standard Wright–Fisher and Moran models of population genetics.

Absolute fitnesses can be used to calculate relative fitness, since   (we have used the fact that  , where   is the mean absolute fitness in the population). This implies that  , or in other words, relative fitness is proportional to  . It is not possible to calculate absolute fitnesses from relative fitnesses alone, since relative fitnesses contain no information about changes in overall population abundance  .

Assigning relative fitness values to genotypes is mathematically appropriate when two conditions are met: first, the population is at demographic equilibrium, and second, individuals vary in their birth rate, contest ability, or death rate, but not a combination of these traits.[5]

Change in genotype frequencies due to selection

 
Increase in frequency over time of genotype  , which has a 1% greater relative fitness than the other genotype present,  .

The change in genotype frequencies due to selection follows immediately from the definition of relative fitness,

 .

Thus, a genotype's frequency will decline or increase depending on whether its fitness is lower or greater than the mean fitness, respectively.

In the particular case that there are only two genotypes of interest (e.g. representing the invasion of a new mutant allele), the change in genotype frequencies is often written in a different form. Suppose that two genotypes   and   have fitnesses   and  , and frequencies   and  , respectively. Then  , and so

 .

Thus, the change in genotype  's frequency depends crucially on the difference between its fitness and the fitness of genotype  . Supposing that   is more fit than  , and defining the selection coefficient   by  , we obtain

 ,

where the last approximation holds for  . In other words, the fitter genotype's frequency grows approximately logistically.

History

The British sociologist Herbert Spencer coined the phrase "survival of the fittest" in his 1864 work Principles of Biology to characterise what Charles Darwin had called natural selection.[6]

The British biologist J.B.S. Haldane was the first to quantify fitness, in terms of the modern evolutionary synthesis of Darwinism and Mendelian genetics starting with his 1924 paper A Mathematical Theory of Natural and Artificial Selection. The next further advance was the introduction of the concept of inclusive fitness by the British biologist W.D. Hamilton in 1964 in his paper on The Genetical Evolution of Social Behaviour.

Genetic load

Genetic load measures the average fitness of a population of individuals, relative either to a theoretical genotype of optimal fitness, or relative to the most fit genotype actually present in the population.[7] Consider n genotypes  , which have the fitnesses   and the genotype frequencies   respectively. Ignoring frequency-dependent selection, then genetic load ( ) may be calculated as:

 

Genetic load may increase when deleterious mutations, migration, inbreeding, or outcrossing lower mean fitness. Genetic load may also increase when beneficial mutations increase the maximum fitness against which other mutations are compared; this is known as the substitutional load or cost of selection.

See also

Notes and references

  1. ^ Wassersug, J. D., and R. J. Wassersug, 1986. Fitness fallacies. Natural History 3:34–37.
  2. ^ Maynard-Smith, J. (1989) Evolutionary Genetics ISBN 978-0-19-854215-5
  3. ^ Hartl, D. L. (1981) A Primer of Population Genetics ISBN 978-0-87893-271-9
  4. ^ Kimura, James F. Crow, Motoo (1970). An introduction to population genetics theory ([Reprint] ed.). New Jersey: Blackburn Press. p. 5. ISBN 978-1-932846-12-6.
  5. ^ Bertram, Jason; Masel, Joanna (January 2019). "Density-dependent selection and the limits of relative fitness". Theoretical Population Biology. 129: 81–92. doi:10.1016/j.tpb.2018.11.006. PMID 30664884.
  6. ^ "Letter 5140 – Wallace, A. R. to Darwin, C. R., 2 July 1866". Darwin Correspondence Project. Retrieved 12 January 2010.
    "Letter 5145 – Darwin, C. R. to Wallace, A. R., 5 July (1866)". Darwin Correspondence Project. Retrieved 12 January 2010.
    ^ "Herbert Spencer in his Principles of Biology of 1864, vol. 1, p. 444, wrote: 'This survival of the fittest, which I have here sought to express in mechanical terms, is that which Mr. Darwin has called "natural selection", or the preservation of favoured races in the struggle for life.'" Maurice E. Stucke, Better Competition Advocacy, retrieved 29 August 2007, citing HERBERT SPENCER, THE PRINCIPLES OF BIOLOGY 444 (Univ. Press of the Pac. 2002.)
  7. ^ Ewens, Warren J. (2003). Mathematical population genetics (2nd ed.). New York: Springer. pp. 78–86. ISBN 978-0-387-20191-7.

Bibliography

  • Sober, E. (2001). The Two Faces of Fitness. In R. Singh, D. Paul, C. Krimbas, and J. Beatty (Eds.), Thinking about Evolution: Historical, Philosophical, and Political Perspectives. Cambridge University Press, pp. 309–321.
  • Orr HA (August 2009). "Fitness and its role in evolutionary genetics". Nat. Rev. Genet. 10 (8): 531–539. doi:10.1038/nrg2603. PMC 2753274. PMID 19546856.

External links

  • Video: Using fitness landscapes to visualize evolution in action
  • BEACON Blog--Evolution 101: Fitness Landscapes
  • Pleiotrophy Blog--an interesting discussion of Sergey Gavrilets's contributions
  • Evolution A-Z: Fitness
  • Stanford Encyclopedia of Philosophy entry

fitness, biology, fitness, often, denoted, displaystyle, population, genetics, models, quantitative, representation, individual, reproductive, success, also, equal, average, contribution, gene, pool, next, generation, made, same, individuals, specified, genoty. Fitness often denoted w displaystyle w or w in population genetics models is the quantitative representation of individual reproductive success It is also equal to the average contribution to the gene pool of the next generation made by the same individuals of the specified genotype or phenotype Fitness can be defined either with respect to a genotype or to a phenotype in a given environment or time The fitness of a genotype is manifested through its phenotype which is also affected by the developmental environment The fitness of a given phenotype can also be different in different selective environments With asexual reproduction it is sufficient to assign fitnesses to genotypes With sexual reproduction recombination scrambles alleles into different genotypes every generation in this case fitness values can be assigned to alleles by averaging over possible genetic backgrounds Natural selection tends to make alleles with higher fitness more common over time resulting in Darwinian evolution The term Darwinian fitness can be used to make clear the distinction with physical fitness 1 Fitness does not include a measure of survival or life span Herbert Spencer s well known phrase survival of the fittest should be interpreted as Survival of the form phenotypic or genotypic that will leave the most copies of itself in successive generations Inclusive fitness differs from individual fitness by including the ability of an allele in one individual to promote the survival and or reproduction of other individuals that share that allele in preference to individuals with a different allele One mechanism of inclusive fitness is kin selection Contents 1 Fitness as propensity 2 Models of fitness 2 1 Absolute fitness 2 2 Relative fitness 2 3 Change in genotype frequencies due to selection 3 History 4 Genetic load 5 See also 6 Notes and references 7 Bibliography 8 External linksFitness as propensity EditFitness is often defined as a propensity or probability rather than the actual number of offspring For example according to Maynard Smith Fitness is a property not of an individual but of a class of individuals for example homozygous for allele A at a particular locus Thus the phrase expected number of offspring means the average number not the number produced by some one individual If the first human infant with a gene for levitation were struck by lightning in its pram this would not prove the new genotype to have low fitness but only that the particular child was unlucky 2 Alternatively the fitness of the individual having an array x of phenotypes is the probability s x that the individual will be included among the group selected as parents of the next generation 3 Models of fitness EditIn order to avoid the complications of sex and recombination the concept of fitness is restricted to an asexual population without genetic recombination Thus fitnesses can be assigned directly to genotypes and measured There are two commonly used measures of fitness absolute fitness and relative fitness Absolute fitness Edit The absolute fitness W displaystyle W of a genotype is defined as the proportional change in the abundance of that genotype over one generation attributable to selection For example if n t displaystyle n t is the abundance of a genotype in generation t displaystyle t in an infinitely large population so that there is no genetic drift and neglecting the change in genotype abundances due to mutations then 4 n t 1 W n t displaystyle n t 1 Wn t An absolute fitness larger than 1 indicates growth in that genotype s abundance an absolute fitness smaller than 1 indicates decline Relative fitness Edit Whereas absolute fitness determines changes in genotype abundance relative fitness w displaystyle w determines changes in genotype frequency If N t displaystyle N t is the total population size in generation t displaystyle t and the relevant genotype s frequency is p t n t N t displaystyle p t n t N t then p t 1 w w p t displaystyle p t 1 frac w overline w p t where w displaystyle overline w is the mean relative fitness in the population again setting aside changes in frequency due to drift and mutation Relative fitnesses only indicate the change in prevalence of different genotypes relative to each other and so only their values relative to each other are important relative fitnesses can be any nonnegative number including 0 It is often convenient to choose one genotype as a reference and set its relative fitness to 1 Relative fitness is used in the standard Wright Fisher and Moran models of population genetics Absolute fitnesses can be used to calculate relative fitness since p t 1 n t 1 N t 1 W W p t displaystyle p t 1 n t 1 N t 1 W overline W p t we have used the fact that N t 1 W N t displaystyle N t 1 overline W N t where W displaystyle overline W is the mean absolute fitness in the population This implies that w w W W displaystyle w overline w W overline W or in other words relative fitness is proportional to W W displaystyle W overline W It is not possible to calculate absolute fitnesses from relative fitnesses alone since relative fitnesses contain no information about changes in overall population abundance N t displaystyle N t Assigning relative fitness values to genotypes is mathematically appropriate when two conditions are met first the population is at demographic equilibrium and second individuals vary in their birth rate contest ability or death rate but not a combination of these traits 5 Change in genotype frequencies due to selection Edit Increase in frequency over time of genotype A displaystyle A which has a 1 greater relative fitness than the other genotype present B displaystyle B The change in genotype frequencies due to selection follows immediately from the definition of relative fitness D p p t 1 p t w w w p t displaystyle Delta p p t 1 p t frac w overline w overline w p t Thus a genotype s frequency will decline or increase depending on whether its fitness is lower or greater than the mean fitness respectively In the particular case that there are only two genotypes of interest e g representing the invasion of a new mutant allele the change in genotype frequencies is often written in a different form Suppose that two genotypes A displaystyle A and B displaystyle B have fitnesses w A displaystyle w A and w B displaystyle w B and frequencies p displaystyle p and 1 p displaystyle 1 p respectively Then w w A p w B 1 p displaystyle overline w w A p w B 1 p and so D p w w w p w A w B w p 1 p displaystyle Delta p frac w overline w overline w p frac w A w B overline w p 1 p Thus the change in genotype A displaystyle A s frequency depends crucially on the difference between its fitness and the fitness of genotype B displaystyle B Supposing that A displaystyle A is more fit than B displaystyle B and defining the selection coefficient s displaystyle s by w A 1 s w B displaystyle w A 1 s w B we obtain D p w w w p s 1 s p p 1 p s p 1 p displaystyle Delta p frac w overline w overline w p frac s 1 sp p 1 p approx sp 1 p where the last approximation holds for s 1 displaystyle s ll 1 In other words the fitter genotype s frequency grows approximately logistically History Edit Herbert Spencer The British sociologist Herbert Spencer coined the phrase survival of the fittest in his 1864 work Principles of Biology to characterise what Charles Darwin had called natural selection 6 The British biologist J B S Haldane was the first to quantify fitness in terms of the modern evolutionary synthesis of Darwinism and Mendelian genetics starting with his 1924 paper A Mathematical Theory of Natural and Artificial Selection The next further advance was the introduction of the concept of inclusive fitness by the British biologist W D Hamilton in 1964 in his paper on The Genetical Evolution of Social Behaviour Genetic load EditMain article Genetic load Genetic load measures the average fitness of a population of individuals relative either to a theoretical genotype of optimal fitness or relative to the most fit genotype actually present in the population 7 Consider n genotypes A 1 A n displaystyle mathbf A 1 dots mathbf A n which have the fitnesses w 1 w n displaystyle w 1 dots w n and the genotype frequencies p 1 p n displaystyle p 1 dots p n respectively Ignoring frequency dependent selection then genetic load L displaystyle L may be calculated as L w max w w max displaystyle L w max bar w over w max Genetic load may increase when deleterious mutations migration inbreeding or outcrossing lower mean fitness Genetic load may also increase when beneficial mutations increase the maximum fitness against which other mutations are compared this is known as the substitutional load or cost of selection See also EditGene centered view of evolution Inclusive fitness Lineage selection Natural selection Reproductive success Selection coefficient Universal Darwinism Differential fitnessNotes and references Edit Wassersug J D and R J Wassersug 1986 Fitness fallacies Natural History 3 34 37 Maynard Smith J 1989 Evolutionary Genetics ISBN 978 0 19 854215 5 Hartl D L 1981 A Primer of Population Genetics ISBN 978 0 87893 271 9 Kimura James F Crow Motoo 1970 An introduction to population genetics theory Reprint ed New Jersey Blackburn Press p 5 ISBN 978 1 932846 12 6 Bertram Jason Masel Joanna January 2019 Density dependent selection and the limits of relative fitness Theoretical Population Biology 129 81 92 doi 10 1016 j tpb 2018 11 006 PMID 30664884 Letter 5140 Wallace A R to Darwin C R 2 July 1866 Darwin Correspondence Project Retrieved 12 January 2010 Letter 5145 Darwin C R to Wallace A R 5 July 1866 Darwin Correspondence Project Retrieved 12 January 2010 Herbert Spencer in his Principles of Biology of 1864 vol 1 p 444 wrote This survival of the fittest which I have here sought to express in mechanical terms is that which Mr Darwin has called natural selection or the preservation of favoured races in the struggle for life Maurice E Stucke Better Competition Advocacy retrieved 29 August 2007 citing HERBERT SPENCER THE PRINCIPLES OF BIOLOGY 444 Univ Press of the Pac 2002 Ewens Warren J 2003 Mathematical population genetics 2nd ed New York Springer pp 78 86 ISBN 978 0 387 20191 7 Bibliography EditSober E 2001 The Two Faces of Fitness In R Singh D Paul C Krimbas and J Beatty Eds Thinking about Evolution Historical Philosophical and Political Perspectives Cambridge University Press pp 309 321 Full text Orr HA August 2009 Fitness and its role in evolutionary genetics Nat Rev Genet 10 8 531 539 doi 10 1038 nrg2603 PMC 2753274 PMID 19546856 External links EditVideo Using fitness landscapes to visualize evolution in action BEACON Blog Evolution 101 Fitness Landscapes Pleiotrophy Blog an interesting discussion of Sergey Gavrilets s contributions Evolution A Z Fitness Stanford Encyclopedia of Philosophy entry Retrieved from https en wikipedia org w index php title Fitness biology amp oldid 1115487764, wikipedia, wiki, book, books, library,

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