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Wikipedia

Tyrosine kinase

A tyrosine kinase is an enzyme that can transfer a phosphate group from ATP to the tyrosine residues of specific proteins inside a cell. It functions as an "on" or "off" switch in many cellular functions.

Protein tyrosine kinase
pdb 2HCK, rendered in PyMOL
Identifiers
SymbolPkinase_Tyr
PfamPF07714
InterProIPR001245
SMARTTyrKc
PROSITEPDOC00629
SCOP21apm / SCOPe / SUPFAM
OPM superfamily186
OPM protein2k1k
CDDcd00192
Membranome3
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

Tyrosine kinases belong to a larger class of enzymes known as protein kinases which also attach phosphates to other amino acids such as serine and threonine. Phosphorylation of proteins by kinases is an important mechanism for communicating signals within a cell (signal transduction) and regulating cellular activity, such as cell division.

Protein kinases can become mutated, stuck in the "on" position, and cause unregulated growth of the cell, which is a necessary step for the development of cancer. Therefore, kinase inhibitors, such as imatinib and osimertinib, are often effective cancer treatments.

Most tyrosine kinases have an associated protein tyrosine phosphatase, which removes the phosphate group.

Reaction Edit

 
Diagram of the activation process.

Protein kinases are a group of enzymes that possess a catalytic subunit that transfers the gamma (terminal) phosphate from nucleoside triphosphates (often ATP) to one or more amino acid residues in a protein substrate side-chain, resulting in a conformational change affecting protein function. The enzymes fall into two broad classes, characterised with respect to substrate specificity: serine/threonine-specific, and tyrosine-specific (the subject of this article).[1]

Function Edit

Kinase is a large family of enzymes that are responsible for catalyzing the transfer of a phosphoryl group from a nucleoside triphosphate donor, such as ATP, to an acceptor molecule.[2] Tyrosine kinases catalyze the phosphorylation of tyrosine residues in proteins.[2] The phosphorylation of tyrosine residues in turn causes a change in the function of the protein that they are contained in.[2]

Phosphorylation at tyrosine residues controls a wide range of properties in proteins such as enzyme activity, subcellular localization, and interaction between molecules.[3] Furthermore, tyrosine kinases function in many signal transduction cascades wherein extracellular signals are transmitted through the cell membrane to the cytoplasm and often to the nucleus, where gene expression may be modified.[3] Finally mutations can cause some tyrosine kinases to become constitutively active, a nonstop functional state that may contribute to initiation or progression of cancer.

Tyrosine kinases function in a variety of processes, pathways, and actions, and are responsible for key events in the body. The receptor tyrosine kinases function in transmembrane signaling, whereas tyrosine kinases within the cell function in signal transduction to the nucleus.[4] Tyrosine kinase activity in the nucleus involves cell-cycle control and properties of transcription factors.[3] In this way, in fact, tyrosine kinase activity is involved in mitogenesis, or the induction of mitosis in a cell; proteins in the cytosol and proteins in the nucleus are phosphorylated at tyrosine residues during this process.[3] Cellular growth and reproduction may rely to some degree on tyrosine kinase. Tyrosine kinase function has been observed in the nuclear matrix, which comprises not the chromatin but rather the nuclear envelope and a “fibrous web” that serves to physically stabilize DNA.[3] To be specific, Lyn, a type of kinase in the Src family that was identified in the nuclear matrix, appears to control the cell cycle. Src family tyrosine kinases are closely related but demonstrate a wide variety of functionality. Roles or expressions of Src family tyrosine kinases vary significantly according to cell type, as well as during cell growth and differentiation.[3] Lyn and Src family tyrosine kinases in general have been known to function in signal transduction pathways.[3] There is evidence that Lyn is localized at the cell membrane; Lyn is associated both physically and functionally with a variety of receptor molecules.[3]

Fibroblasts – a type of cell that synthesizes the extracellular matrix and collagen and is involved in wound healing – that have been transformed by the polyomavirus possess higher tyrosine activity in the cellular matrix. Furthermore, tyrosine kinase activity has been determined to be correlated to cellular transformation.[3] It has also been demonstrated that phosphorylation of a middle-T antigen on tyrosine is also associated with cell transformation, a change that is similar to cellular growth or reproduction.[3]

The transmission of mechanical force and regulatory signals are quite fundamental in the normal survival of a living organism. Protein tyrosine kinase plays a role in this task, too. A protein tyrosine kinase called pp125, also referred to as focal adhesion kinase (FAK) is likely at hand in the influence of cellular focal adhesions, as indicated by an immunofluorescent localization of FAK. Focal adhesions are macromolecular structures that function in the transmission of mechanical force and regulatory signals.[5]

Cellular proliferation, as explained in some detail above, may rely in some part on tyrosine kinase.[3] Tyrosine kinase function has been observed in the nuclear matrix. Lyn, the type of kinase that was the first to be discovered in the nuclear matrix, is part of Src family of tyrosine kinases, which can be contained in the nucleus of differentiating, calcium-provoked kertinocytes. Lyn, in the nuclear matrix, among the nuclear envelope and the “fibrous web” that physically stabilizes DNA, was found functioning in association with the matrix. Also, it appeared to be conditional to cell cycle.[3] The contribution of the Lyn protein to the total tyrosine kinase activity within the nuclear matrix is unknown, however; because the Lyn was extracted only partially, an accurate measurement of its activity could not be managed.[3] Indications, as such, are that, according to Vegesna et al. (1996), Lyn polypeptides are associated with tyrosine kinase activity in the nuclear matrix. The extracted Lyn was enzymatically active, offering support for this notion.

Yet another possible and probable role of protein tyrosine kinase is that in the event of circulatory failure and organ dysfunction caused by endotoxin in rats, where the effects of inhibitors tyrphostin and genistein are involved with protein tyrosine kinase.[4] Signals in the surroundings received by receptors in the membranes of cells are transmitted into the cell cytoplasm. Transmembrane signaling due to receptor tyrosine kinases, according to Bae et al. (2009), relies heavily on interactions, for example, mediated by the SH2 protein domain; it has been determined via experimentation that the SH2 protein domain selectivity is functional in mediating cellular processes involving tyrosine kinase. Receptor tyrosine kinases may, by this method, influence growth factor receptor signaling. This is one of the more fundamental cellular communication functions metazoans.[6]

Regulation Edit

Major changes are sometimes induced when the tyrosine kinase enzyme is affected by other factors. One of the factors is a molecule that is bound reversibly by a protein, called a ligand. A number of receptor tyrosine kinases, though certainly not all, do not perform protein-kinase activity until they are occupied, or activated, by one of these ligands.[2] Although more research indicates that receptors remain active within endosomes, it was once thought that endocytosis caused by ligands was the event responsible for the process in which receptors are inactivated. Activated receptor tyrosine kinase receptors are internalized (recycled back into the system) in short time and are ultimately delivered to lysosomes, where they become work-adjacent to the catabolic acid hydrolases that partake in digestion. Internalized signaling complexes are involved in different roles in different receptor tyrosine kinase systems, the specifics of which were researched.[7] In addition, ligands participate in reversible binding, with inhibitors binding non-covalently (inhibition of different types are effected depending on whether these inhibitors bind the enzyme, the enzyme-substrate complex, or both). Multivalency, which is an attribute that bears particular interest to some people involved in related scientific research, is a phenomenon characterized by the concurrent binding of several ligands positioned on one unit to several coinciding receptors on another.[8] In any case, the binding of the ligand to its partner is apparent owing to the effects that it can have on the functionality of many proteins.[2] Ligand-activated receptor tyrosine kinases, as they are sometimes referred to, demonstrate a unique attribute. Once a tyrosine receptor kinase is bonded to its ligand, it is able to bind to tyrosine kinase residing in the cytosol of the cell.[2]

Erythrocytes Edit

An example of this trigger-system in action is the process by which the formation of erythrocytes is regulated. Mammals possess this system, which begins in the kidneys where the developmental signal is manufactured.[2] The developmental signal, also called a cytokine, is erythropoietin in this case. (Cytokines are key regulators of hematopoietic cell proliferation and differentiation.) Erythropoietin's activity is initiated when hematopoietic cytokine receptors become activated.[9] In erythrocyte regulation, erythropoietin is a protein containing 165 amino acids that plays a role in activating the cytoplasmic protein kinase JAK.[2] The results of some newer research have also indicated that the aforementioned cytokine receptors function with members of the JAK tyrosine kinase family. The cytokine receptors activate the JAK kinases. This then results in the phosphorylation of several signaling proteins located in the cell membrane. This subsequently affects both the stimulation of ligand-mediated receptors and intracellular signaling pathway activation.[9] Substrates for JAK kinases mediate some gene responses and more.[9] The process is also responsible for mediating the production of blood cells.[2] In this case, erythropoietin binds to the corresponding plasma membrane receptor, dimerizing the receptor.[2] The dimer is responsible for activating the kinase JAK via binding.[2] Tyrosine residues located in the cytoplasmic domain of the erythropoietin receptor are consequently phosphorylated by the activated protein kinase JAK.[2] Overall, this is also how a receptor tyrosine kinase might be activated by a ligand to regulate erythrocyte formation.[citation needed]

Other examples Edit

Additional instances of factor-influenced protein tyrosine kinase activity, similar to this one, exist. An adapter protein such as Grb2 will bind to phosphate-tyrosine residues under the influence of receptor protein kinases. This mechanism is an ordinary one that provokes protein-protein interactions.[2]

Furthermore, to illustrate an extra circumstance, insulin-associated factors have been determined to influence tyrosine kinase. Insulin receptor substrates are molecules that function in signaling by regulating the effects of insulin.[2] Many receptor enzymes have closely related structure and receptor tyrosine kinase activity, and it has been determined that the foundational or prototypical receptor enzyme is insulin.[2] Insulin receptor substrates IRS2 and IRS3 each have unique characteristic tissue function and distribution that serves to enhance signaling capabilities in pathways that are initiated by receptor tyrosine kinases.[2] Activated IRS-1 molecules enhance the signal created by insulin.[2] The insulin receptor system, in contrast, appears to diminish the efficacy of endosomal signaling.[7]

The epidermal growth factor receptor system, as such, has been used as an intermediate example.[7] Some signals are produced from the actual cell surface in this case but other signals seem to emanate from within the endosomes. This variety of function may be a means to create ligand-specific signals.[7] This supports the notion that trafficking, a term for the modification of proteins subsequent to mRNA translation, may be vital to the function of receptor signaling.

Structure Edit

Protein tyrosine kinase proteins contain a Protein kinase domain, which consists of an N-terminal lobe comprising 5 beta sheet strands and an alpha helix called the C-helix, and a C-terminal domain usually comprising 6 alpha helices (helices D, E, F, G, H, and I). Two loops in the center of the kinase domain control catalysis. The catalytic loop contains the HRD motif (usually with sequence His-Arg-Asp). The aspartic acid of this motif forms a hydrogen bond with the substrate OH group on Tyr during catalysis. The other loop is the activation loop, whose position and conformation determine in part whether the kinase is active or inactive. The activation loop begins with the DFG motif (usually with sequence Asp-Phe-Gly).[10]

There are over 1800 3D structures of tyrosine kinases available in the Protein Data Bank. An example is PDB: 1IRK​, the crystal structure of the tyrosine kinase domain of the human insulin receptor.

Families Edit

There are 90 human genes that contain a total of 94 protein tyrosine kinase domains (PTKs). Four genes contain both a catalytically active kinase domain and a pseudokinase domain (a kinase domain with no catalytic activity: JAK1, JAK2, JAK3, and TYK2). Including these four genes, there are 82 human genes that contain a catalytically active tyrosine kinase domain They are divided into two classes, receptor and non-receptor tyrosine kinases.

Receptor Edit

By 2004, 58 human receptor tyrosine kinases (RTKs) were known, grouped into 20 subfamilies. Eight of these membrane proteins which contain tyrosine protein kinase domains are actually pseudokinases, without catalytic activity (EPHA10, EPHB6, ERBB3, PTK7, ROR1, ROR2, RYK, and STYK1). Receptor tyrosine kinases play pivotal roles in diverse cellular activities including growth (by signaling neurotrophins), differentiation, metabolism, adhesion, motility, and death.[11] RTKs are composed of an extracellular domain, which is able to bind a specific ligand, a transmembrane domain, and an intracellular catalytic domain, which is able to bind and phosphorylate selected substrates. Binding of a ligand to the extracellular region causes a series of structural rearrangements in the RTK that lead to its enzymatic activation. In particular, movement of some parts of the kinase domain gives free access to adenosine triphosphate (ATP) and the substrate to the active site. This triggers a cascade of events through phosphorylation of intracellular proteins that ultimately transmit ("transduce") the extracellular signal to the nucleus, causing changes in gene expression. Many RTKs are involved in oncogenesis, either by gene mutation, or chromosome translocation,[12] or simply by over-expression. In every case, the result is a hyper-active kinase, that confers an aberrant, ligand-independent, non-regulated growth stimulus to the cancer cells.

Cytoplasmic/non-receptor Edit

In humans, there are 32 cytoplasmic protein tyrosine kinases (EC 2.7.10.2).

The first non-receptor tyrosine kinase identified was the v-src oncogenic protein. Most animal cells contain one or more members of the Src family of tyrosine kinases. A chicken sarcoma virus, the Rous sarcoma virus mentioned above, was found to carry mutated versions of the normal cellular Src gene.[13] The mutated v-src gene has lost the normal built-in inhibition of enzyme activity that is characteristic of cellular SRC (c-src) genes. SRC family members have been found to regulate many cellular processes. For example, the T-cell antigen receptor leads to intracellular signalling by activation of Lck and Fyn, two proteins that are structurally similar to Src.[citation needed]

Clinical significance Edit

Tyrosine kinases are particularly important today because of their implications in the treatment of cancer. A mutation that causes certain tyrosine kinases to be constitutively active has been associated with several cancers. Imatinib (brand names Gleevec and Glivec) is a drug able to bind the catalytic cleft of these tyrosine kinases, inhibiting its activity.[14]

Tyrosine kinase activity is also significantly involved in other events that are sometimes considered highly unfavorable. For instance, enhanced activity of the enzyme has been implicated in the derangement of the function of certain systems, such as cell division. Also included are numerous diseases related to local inflammation such as atherosclerosis and psoriasis, or systemic inflammation such as sepsis and septic shock.[4] A number of viruses target tyrosine kinase function during infection. The polyoma virus affects tyrosine kinase activity inside the nuclear matrix.[3] Fibroblasts are cells involved in wound healing and cell structure formation in mammalian cells. When these cells are transformed by the polyoma virus, higher tyrosine activity is observed in the cellular matrix, which is also correlated to cellular proliferation.[3] Another virus that targets tyrosine kinase is the Rous sarcoma virus, a retrovirus that causes sarcoma in chickens. Infected cells display obvious structure modifications and cell growth regulation that is extremely unusual.[5] Protein tyrosine kinases that are encoded by the Rous sarcoma virus cause cellular transformation, and are termed oncoproteins.[5] In addition, tyrosine kinase can sometimes function incorrectly in such a way that leads to non-small cell lung cancer.[15] A common, widespread cancer, non-small cell lung cancer is the cause of death in more people than the total number in breast, colorectal, and prostate cancer together.[15]

Research has shown that protein phosphorylation occurs on residues of tyrosine by both transmembrane receptor- and membrane-associated protein tyrosine kinases in normal cells. Phosphorylation plays a significant role in cellular signalling that regulates the number and variety of growth factors. This is evidenced by the observation that cells affected by the Rous sarcoma virus display obvious structural modifications and a total lack of normal cell growth regulation.[5] Rous sarcoma virus-encoded oncoproteins are protein tyrosine kinases that are the cause of, and are required for, this cellular transformation. Tyrosine phosphorylation activity also increases or decreases in conjunction with changes in cell composition and growth regulation. In this way, a certain transformation exhibited by cells is dependent on a role that tyrosine kinase demonstrates.[5] Protein tyrosine kinases, have a major role in the activation of lymphocytes. In addition, they are functional in mediating communication pathways in cell types such as adrenal chromaffin, platelets, and neural cells.

A tyrosine kinase can become an unregulated enzyme within an organism due to influences discussed, such as mutations and more. This behavior causes havoc; essential processes become disorganized. Systems on which the organism relies malfunction, resulting often in cancers. Preventing this type of circumstance is highly desirable. Much research has already noted the significant effect that inhibitors of the radically functioning protein tyrosine kinase enzymes have on related ailments.[citation needed] (See Tyrosine-kinase inhibitor )

Non-small cell lung cancer Edit

Cancer's response to an inhibitor of tyrosine kinase was assessed in a clinical trial.[15] In this case, Gefitinib is the inhibitor of tyrosine kinase. Incorrect tyrosine kinase function can lead to non-small cell lung cancer.[16] Gefitinib is a tyrosine kinase inhibitor that targets the epidermal growth factor receptor, inducing favorable outcomes in patients with non-small cell lung cancers. A common, widespread cancer, non-small cell lung cancer is the cause of death in more people than breast, colorectal, and prostate cancer together.[15] This is strong motivation to perform research on tyrosine kinase inhibitors as potential targets in cancer treatment. Gefitinib, functioning as an epidermal growth factor receptor tyrosine kinase inhibitor, improved symptoms related to non-small cell lung cancer and resulted in radiographic tumor regressions.[15] This is an example of the efficacy of such an inhibitor. The process of inhibition shows how the cancer sustains. Mutations in the epidermal growth factor receptor activate signalling pathways that promote cell survival. Non-small cell lung cancer cells become dependent on these survival signals. Gefitinib's inhibition of the survival signals may be a contributing factor to its efficacy as a drug for non-small cell cancer treatment.[16]

Gefitinib is well endured by humans, and treatment resulted in a symptom improvement rate of 43% (with 95% confidence in a 33%–53% interval) for patients that received 250 mg of Gefitinib and 35% (with 95% confidence in a 26%–45% interval) for those that received 500 mg.[15] In the trial, epidermal growth factor receptor showed a rapid response to the inhibitor, as demonstrated by the improvement of the cancer symptoms. In each group, improvements were noted after a single week of epidermal growth factor receptor tyrosine kinase inhibitor treatment.[15] Gefitinib application once per day caused “rapid” symptom improvement and tumor regressions in non-small cell lung cancer patients.[15] In the field of medical research, this is an especially significant example of the use of an inhibitor to treat tyrosine kinase-associated cancer. Chemotherapy, surgery, and radiotherapy were the only major options available prior to the discoveries made in this trial. The side-effects of Gefitinib oral treatment once per day were considered significant. Diarrhea was reported in 57% of patients in the 250 mg group and in 75% of the 500 mg group.[15] One patient had diarrhea more severe than Grade 2, with up to six bowel movements in only one day.[15] Also, a death occurred possibly due to epidermal growth factor receptor tyrosine kinase inhibitor treatment; however, the correlation is not exactly clear.[15] In addition, skin toxicity was observed in 62% of patients in the 250 mg group. Nevertheless, the side-effects of Gefitinib were only “generally mild, manageable, noncumulative, and reversible.”[15] Unfortunately, ceasing to take the inhibitor may be the only reversal strategy of the unfavorable symptoms.[15] Gefitinib still represents a reasonably safe and effective treatment compared to other cancer therapies.

Furthermore, epidermal growth factor receptor plays a crucial role in tumorigenesis, which is the production of a new tumor.[17] By 2010 Two monoclonal antibodies and another small-molecule tyrosine kinase inhibitor called Erlotinib had also been developed to treat cancer.[17]

July 12, 2013 FDA approved afatinib "multiple receptor, irreversible TKI" for the first-line treatment of patients with metastatic non-small cell lung cancer (NSCLC) whose tumors have epidermal growth factor receptor (EGFR) mutation

Chronic myeloid leukemia Edit

BCR-ABL is a constitutively activated tyrosine kinase that is associated with chronic myeloid leukemia. It is formed from a fusion gene when pieces of chromosomes 9 and 22 break off and trade places. The ABL gene from chromosome 9 joins to the BCR gene on chromosome 22, to form the BCR-ABL fusion gene.[18] Tyrosine kinase activity is crucial for the transformation of BCR-ABL. Therefore, inhibiting it improves cancer symptoms. Among currently available inhibitors to treat CML are imatinib, dasatinib, nilotinib, bosutinib and ponatinib.[19]

Gastrointestinal stromal tumors Edit

Gastrointestinal stromal tumors (GIST) are known to withstand cancer chemotherapy treatment and do not respond to any kind of therapy (in 2001) in advanced cases. However, tyrosine kinase inhibitor STI571 (imatinib) is effective in the treatment of patients with metastatic gastrointestinal stromal tumors.[20] Gastrointestinal stromal tumors consist of a cluster of mesenchymal neoplasms that are formed from precursors to cells that make up the connective-tissue in the gastrointestinal tract.[20] Most of these tumors are found in the stomach, though they can also be located in the small intestine or elsewhere in the intestinal tract. The cells of these tumors have a growth factor receptor associated with tyrosine kinase activity.[20] This growth factor receptor is called c-kit and is produced by a proto-oncogene (c-kit). Mutation of c-kit causes the constitutive activity of tyrosine kinase, which results in cancerous gastrointestinal stromal tumors. Results of c-kit mutation include unrestricted tyrosine kinase activity and cell proliferation, unregulated phosphorylation of c-kit, and disruption of some communication pathways.[20] Therapy with imatinib can inhibit the non-normal cell signaling mechanisms in gastrointestinal stromal tumors. This results in significant responses in patients and sustained disease control. By 2001 it was no longer doubted that this inhibitor can be effective and safe in humans.[7] In similar manner, protein tyrosine kinase inhibitor STI571 was found to significantly reduce the physical size of tumors; they decreased roughly 65% in size in 4 months of trialing, and continued to diminish. New lesions did not appear, and a number of the liver metastases completely reduced to non-existence. The single patient in the study remained healthy following treatment.[20] There are no effective means of treatment for advanced gastrointestinal stromal tumors, but that STI571 represents an effective treatment in early stage cancer associated with constitutively active c-kit, by inhibiting unfavourable tyrosine kinase activity.[20]

Inhibitors Edit

To reduce enzyme activity, inhibitor molecules bind to enzymes. Reducing enzyme activity can disable a pathogen or correct an incorrectly function system; as such, many enzyme inhibitors are developed to be used as drugs by the general public.

GIST and Imatinib Edit

Gastrointestinal stromal tumors (GIST) are mesenchymal tumors that affect the gastrointestinal tract.[21] Treatment options have been limited.[21] However Imatinib, as an inhibitor to the malfunctioning enzyme, can be effective.[21]

Chronic myelogenous leukemia and nilotinib Edit

If imatinib does not work, patients with advanced chronic myelogenous leukemia can use nilotinib, dasatinib, bosutinib, ponatinib, or another inhibitor to the malfunction enzyme that causes the leukemia.[22] This inhibitor is a highly selective Bcr-Abl tyrosine kinase inhibitor.[22]

Others Edit

Sunitinib is an oral tyrosine kinase inhibitor that acts upon vascular endothelial growth factor receptor (VEGFR), platelet-derived growth factor receptor (PDGFR), stem cell factor receptor, and colony-stimulating factor-1 receptor (Burstein et al. 2008)

Gefitinib and erlotinib inhibit the tyrosine kinase domain of epidermal growth factor receptor (EGFR), and can be used to treat lung and pancreatic cancer where there is often over-expression of this cell-surface receptor tyrosine kinase.

Kinase inhibitors can also be mediated. Paracrine signalling mediates the response to epidermal growth factor receptor kinase inhibitors. Paracrine activates epidermal growth factor receptor in endothelial cells of the tumor to do this.[23]

Dasatinib is a Src tyrosine kinase inhibitor that is effective both as a senolytic and as therapy for chronic myelogenous leukemia.[24]

Examples Edit

Human proteins containing this domain include:

AATK; ABL; ABL2; ALK; AXL; BLK; BMX; BTK; CSF1R; CSK; DDR1; DDR2; EGFR; EPHA1; EPHA2; EPHA3; EPHA4; EPHA5; EPHA6; EPHA7; EPHA8; EPHA10; EPHB1; EPHB2; EPHB3; EPHB4; EPHB6; ERBB2; ERBB3; ERBB4; FER; FES; FGFR1; FGFR2; FGFR3; FGFR4; FGR; FLT1; FLT3; FLT4; FRK; FYN; GSG2; HCK; IGF1R; ILK; INSR; INSRR; IRAK4; ITK; JAK1; JAK2; JAK3; KDR; KIT; KSR1; LCK; LMTK2; LMTK3; LTK; LYN; MATK; MERTK; MET; MLTK; MST1R; MUSK; NPR1; NTRK1; NTRK2; NTRK3; PDGFRA; PDGFRB; PKDCC; PLK4; PTK2; PTK2B; PTK6; PTK7; RET; ROR1; ROR2; ROS1; RYK; SRC; SRMS; STYK1; SYK; TEC; TEK; TEX14; TIE1; TNK1; TNK2; TNNI3K; TXK; TYK2; TYRO3; YES1; ZAP70

See also Edit

References Edit

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  22. ^ a b le Coutre P, Ottmann OG, Giles F, Kim DW, Cortes J, Gattermann N, et al. (February 2008). "Nilotinib (formerly AMN107), a highly selective BCR-ABL tyrosine kinase inhibitor, is active in patients with imatinib-resistant or -intolerant accelerated-phase chronic myelogenous leukemia". Blood. 111 (4): 1834–1839. doi:10.1182/blood-2007-04-083196. PMID 18048643.
  23. ^ Kuwai T, Nakamura T, Sasaki T, Kim SJ, Fan D, Villares GJ, et al. (May 2008). "Phosphorylated epidermal growth factor receptor on tumor-associated endothelial cells is a primary target for therapy with tyrosine kinase inhibitors". Neoplasia. 10 (5): 489–500. doi:10.1593/neo.08200. PMC 2373870. PMID 18472966.
  24. ^ Rivera-Torres J, San José E (2019). "Src Tyrosine Kinase Inhibitors: New Perspectives on Their Immune, Antiviral, and Senotherapeutic Potential". Frontiers in Pharmacology. 10: 1011. doi:10.3389/fphar.2019.01011. PMC 6759511. PMID 31619990.

External links Edit

  • Eukaryotic Linear Motif resource motif class MOD_TYR_CSK
  • Tyrosine Kinases on KinCore: the Kinase Conformation Resource: A web resource for protein kinase sequence, structure and phylogeny
  • The Tyrosine Kinase group
  • Overview of all the structural information available in the PDB for UniProt: P08631 (Tyrosine-protein kinase HCK) at the PDBe-KB.
  • Overview of all the structural information available in the PDB for UniProt: P00520 (Tyrosine-protein kinase ABL1) at the PDBe-KB.
  • Overview of all the structural information available in the PDB for UniProt: O60674 (Tyrosine-protein kinase JAK2) at the PDBe-KB.

tyrosine, kinase, tyrosine, kinase, enzyme, that, transfer, phosphate, group, from, tyrosine, residues, specific, proteins, inside, cell, functions, switch, many, cellular, functions, protein, tyrosine, kinasepdb, 2hck, rendered, pymolidentifierssymbolpkinase,. A tyrosine kinase is an enzyme that can transfer a phosphate group from ATP to the tyrosine residues of specific proteins inside a cell It functions as an on or off switch in many cellular functions Protein tyrosine kinasepdb 2HCK rendered in PyMOLIdentifiersSymbolPkinase TyrPfamPF07714InterProIPR001245SMARTTyrKcPROSITEPDOC00629SCOP21apm SCOPe SUPFAMOPM superfamily186OPM protein2k1kCDDcd00192Membranome3Available protein structures Pfam structures ECOD PDBRCSB PDB PDBe PDBjPDBsumstructure summaryTyrosine kinases belong to a larger class of enzymes known as protein kinases which also attach phosphates to other amino acids such as serine and threonine Phosphorylation of proteins by kinases is an important mechanism for communicating signals within a cell signal transduction and regulating cellular activity such as cell division Protein kinases can become mutated stuck in the on position and cause unregulated growth of the cell which is a necessary step for the development of cancer Therefore kinase inhibitors such as imatinib and osimertinib are often effective cancer treatments Most tyrosine kinases have an associated protein tyrosine phosphatase which removes the phosphate group Contents 1 Reaction 2 Function 3 Regulation 3 1 Erythrocytes 3 2 Other examples 4 Structure 5 Families 5 1 Receptor 5 2 Cytoplasmic non receptor 6 Clinical significance 6 1 Non small cell lung cancer 6 2 Chronic myeloid leukemia 6 3 Gastrointestinal stromal tumors 7 Inhibitors 7 1 GIST and Imatinib 7 2 Chronic myelogenous leukemia and nilotinib 7 3 Others 8 Examples 9 See also 10 References 11 External linksReaction Edit nbsp Diagram of the activation process Protein kinases are a group of enzymes that possess a catalytic subunit that transfers the gamma terminal phosphate from nucleoside triphosphates often ATP to one or more amino acid residues in a protein substrate side chain resulting in a conformational change affecting protein function The enzymes fall into two broad classes characterised with respect to substrate specificity serine threonine specific and tyrosine specific the subject of this article 1 Function EditKinase is a large family of enzymes that are responsible for catalyzing the transfer of a phosphoryl group from a nucleoside triphosphate donor such as ATP to an acceptor molecule 2 Tyrosine kinases catalyze the phosphorylation of tyrosine residues in proteins 2 The phosphorylation of tyrosine residues in turn causes a change in the function of the protein that they are contained in 2 Phosphorylation at tyrosine residues controls a wide range of properties in proteins such as enzyme activity subcellular localization and interaction between molecules 3 Furthermore tyrosine kinases function in many signal transduction cascades wherein extracellular signals are transmitted through the cell membrane to the cytoplasm and often to the nucleus where gene expression may be modified 3 Finally mutations can cause some tyrosine kinases to become constitutively active a nonstop functional state that may contribute to initiation or progression of cancer Tyrosine kinases function in a variety of processes pathways and actions and are responsible for key events in the body The receptor tyrosine kinases function in transmembrane signaling whereas tyrosine kinases within the cell function in signal transduction to the nucleus 4 Tyrosine kinase activity in the nucleus involves cell cycle control and properties of transcription factors 3 In this way in fact tyrosine kinase activity is involved in mitogenesis or the induction of mitosis in a cell proteins in the cytosol and proteins in the nucleus are phosphorylated at tyrosine residues during this process 3 Cellular growth and reproduction may rely to some degree on tyrosine kinase Tyrosine kinase function has been observed in the nuclear matrix which comprises not the chromatin but rather the nuclear envelope and a fibrous web that serves to physically stabilize DNA 3 To be specific Lyn a type of kinase in the Src family that was identified in the nuclear matrix appears to control the cell cycle Src family tyrosine kinases are closely related but demonstrate a wide variety of functionality Roles or expressions of Src family tyrosine kinases vary significantly according to cell type as well as during cell growth and differentiation 3 Lyn and Src family tyrosine kinases in general have been known to function in signal transduction pathways 3 There is evidence that Lyn is localized at the cell membrane Lyn is associated both physically and functionally with a variety of receptor molecules 3 Fibroblasts a type of cell that synthesizes the extracellular matrix and collagen and is involved in wound healing that have been transformed by the polyomavirus possess higher tyrosine activity in the cellular matrix Furthermore tyrosine kinase activity has been determined to be correlated to cellular transformation 3 It has also been demonstrated that phosphorylation of a middle T antigen on tyrosine is also associated with cell transformation a change that is similar to cellular growth or reproduction 3 The transmission of mechanical force and regulatory signals are quite fundamental in the normal survival of a living organism Protein tyrosine kinase plays a role in this task too A protein tyrosine kinase called pp125 also referred to as focal adhesion kinase FAK is likely at hand in the influence of cellular focal adhesions as indicated by an immunofluorescent localization of FAK Focal adhesions are macromolecular structures that function in the transmission of mechanical force and regulatory signals 5 Cellular proliferation as explained in some detail above may rely in some part on tyrosine kinase 3 Tyrosine kinase function has been observed in the nuclear matrix Lyn the type of kinase that was the first to be discovered in the nuclear matrix is part of Src family of tyrosine kinases which can be contained in the nucleus of differentiating calcium provoked kertinocytes Lyn in the nuclear matrix among the nuclear envelope and the fibrous web that physically stabilizes DNA was found functioning in association with the matrix Also it appeared to be conditional to cell cycle 3 The contribution of the Lyn protein to the total tyrosine kinase activity within the nuclear matrix is unknown however because the Lyn was extracted only partially an accurate measurement of its activity could not be managed 3 Indications as such are that according to Vegesna et al 1996 Lyn polypeptides are associated with tyrosine kinase activity in the nuclear matrix The extracted Lyn was enzymatically active offering support for this notion Yet another possible and probable role of protein tyrosine kinase is that in the event of circulatory failure and organ dysfunction caused by endotoxin in rats where the effects of inhibitors tyrphostin and genistein are involved with protein tyrosine kinase 4 Signals in the surroundings received by receptors in the membranes of cells are transmitted into the cell cytoplasm Transmembrane signaling due to receptor tyrosine kinases according to Bae et al 2009 relies heavily on interactions for example mediated by the SH2 protein domain it has been determined via experimentation that the SH2 protein domain selectivity is functional in mediating cellular processes involving tyrosine kinase Receptor tyrosine kinases may by this method influence growth factor receptor signaling This is one of the more fundamental cellular communication functions metazoans 6 Regulation EditMajor changes are sometimes induced when the tyrosine kinase enzyme is affected by other factors One of the factors is a molecule that is bound reversibly by a protein called a ligand A number of receptor tyrosine kinases though certainly not all do not perform protein kinase activity until they are occupied or activated by one of these ligands 2 Although more research indicates that receptors remain active within endosomes it was once thought that endocytosis caused by ligands was the event responsible for the process in which receptors are inactivated Activated receptor tyrosine kinase receptors are internalized recycled back into the system in short time and are ultimately delivered to lysosomes where they become work adjacent to the catabolic acid hydrolases that partake in digestion Internalized signaling complexes are involved in different roles in different receptor tyrosine kinase systems the specifics of which were researched 7 In addition ligands participate in reversible binding with inhibitors binding non covalently inhibition of different types are effected depending on whether these inhibitors bind the enzyme the enzyme substrate complex or both Multivalency which is an attribute that bears particular interest to some people involved in related scientific research is a phenomenon characterized by the concurrent binding of several ligands positioned on one unit to several coinciding receptors on another 8 In any case the binding of the ligand to its partner is apparent owing to the effects that it can have on the functionality of many proteins 2 Ligand activated receptor tyrosine kinases as they are sometimes referred to demonstrate a unique attribute Once a tyrosine receptor kinase is bonded to its ligand it is able to bind to tyrosine kinase residing in the cytosol of the cell 2 Erythrocytes Edit An example of this trigger system in action is the process by which the formation of erythrocytes is regulated Mammals possess this system which begins in the kidneys where the developmental signal is manufactured 2 The developmental signal also called a cytokine is erythropoietin in this case Cytokines are key regulators of hematopoietic cell proliferation and differentiation Erythropoietin s activity is initiated when hematopoietic cytokine receptors become activated 9 In erythrocyte regulation erythropoietin is a protein containing 165 amino acids that plays a role in activating the cytoplasmic protein kinase JAK 2 The results of some newer research have also indicated that the aforementioned cytokine receptors function with members of the JAK tyrosine kinase family The cytokine receptors activate the JAK kinases This then results in the phosphorylation of several signaling proteins located in the cell membrane This subsequently affects both the stimulation of ligand mediated receptors and intracellular signaling pathway activation 9 Substrates for JAK kinases mediate some gene responses and more 9 The process is also responsible for mediating the production of blood cells 2 In this case erythropoietin binds to the corresponding plasma membrane receptor dimerizing the receptor 2 The dimer is responsible for activating the kinase JAK via binding 2 Tyrosine residues located in the cytoplasmic domain of the erythropoietin receptor are consequently phosphorylated by the activated protein kinase JAK 2 Overall this is also how a receptor tyrosine kinase might be activated by a ligand to regulate erythrocyte formation citation needed Other examples Edit Additional instances of factor influenced protein tyrosine kinase activity similar to this one exist An adapter protein such as Grb2 will bind to phosphate tyrosine residues under the influence of receptor protein kinases This mechanism is an ordinary one that provokes protein protein interactions 2 Furthermore to illustrate an extra circumstance insulin associated factors have been determined to influence tyrosine kinase Insulin receptor substrates are molecules that function in signaling by regulating the effects of insulin 2 Many receptor enzymes have closely related structure and receptor tyrosine kinase activity and it has been determined that the foundational or prototypical receptor enzyme is insulin 2 Insulin receptor substrates IRS2 and IRS3 each have unique characteristic tissue function and distribution that serves to enhance signaling capabilities in pathways that are initiated by receptor tyrosine kinases 2 Activated IRS 1 molecules enhance the signal created by insulin 2 The insulin receptor system in contrast appears to diminish the efficacy of endosomal signaling 7 The epidermal growth factor receptor system as such has been used as an intermediate example 7 Some signals are produced from the actual cell surface in this case but other signals seem to emanate from within the endosomes This variety of function may be a means to create ligand specific signals 7 This supports the notion that trafficking a term for the modification of proteins subsequent to mRNA translation may be vital to the function of receptor signaling nbsp Tyrosine nbsp Phosphate nbsp ATPStructure EditProtein tyrosine kinase proteins contain a Protein kinase domain which consists of an N terminal lobe comprising 5 beta sheet strands and an alpha helix called the C helix and a C terminal domain usually comprising 6 alpha helices helices D E F G H and I Two loops in the center of the kinase domain control catalysis The catalytic loop contains the HRD motif usually with sequence His Arg Asp The aspartic acid of this motif forms a hydrogen bond with the substrate OH group on Tyr during catalysis The other loop is the activation loop whose position and conformation determine in part whether the kinase is active or inactive The activation loop begins with the DFG motif usually with sequence Asp Phe Gly 10 There are over 1800 3D structures of tyrosine kinases available in the Protein Data Bank An example is PDB 1IRK the crystal structure of the tyrosine kinase domain of the human insulin receptor Families EditThere are 90 human genes that contain a total of 94 protein tyrosine kinase domains PTKs Four genes contain both a catalytically active kinase domain and a pseudokinase domain a kinase domain with no catalytic activity JAK1 JAK2 JAK3 and TYK2 Including these four genes there are 82 human genes that contain a catalytically active tyrosine kinase domain They are divided into two classes receptor and non receptor tyrosine kinases Receptor Edit Further information receptor tyrosine kinase By 2004 58 human receptor tyrosine kinases RTKs were known grouped into 20 subfamilies Eight of these membrane proteins which contain tyrosine protein kinase domains are actually pseudokinases without catalytic activity EPHA10 EPHB6 ERBB3 PTK7 ROR1 ROR2 RYK and STYK1 Receptor tyrosine kinases play pivotal roles in diverse cellular activities including growth by signaling neurotrophins differentiation metabolism adhesion motility and death 11 RTKs are composed of an extracellular domain which is able to bind a specific ligand a transmembrane domain and an intracellular catalytic domain which is able to bind and phosphorylate selected substrates Binding of a ligand to the extracellular region causes a series of structural rearrangements in the RTK that lead to its enzymatic activation In particular movement of some parts of the kinase domain gives free access to adenosine triphosphate ATP and the substrate to the active site This triggers a cascade of events through phosphorylation of intracellular proteins that ultimately transmit transduce the extracellular signal to the nucleus causing changes in gene expression Many RTKs are involved in oncogenesis either by gene mutation or chromosome translocation 12 or simply by over expression In every case the result is a hyper active kinase that confers an aberrant ligand independent non regulated growth stimulus to the cancer cells Cytoplasmic non receptor Edit Further information Non receptor tyrosine kinase In humans there are 32 cytoplasmic protein tyrosine kinases EC 2 7 10 2 The first non receptor tyrosine kinase identified was the v src oncogenic protein Most animal cells contain one or more members of the Src family of tyrosine kinases A chicken sarcoma virus the Rous sarcoma virus mentioned above was found to carry mutated versions of the normal cellular Src gene 13 The mutated v src gene has lost the normal built in inhibition of enzyme activity that is characteristic of cellular SRC c src genes SRC family members have been found to regulate many cellular processes For example the T cell antigen receptor leads to intracellular signalling by activation of Lck and Fyn two proteins that are structurally similar to Src citation needed Clinical significance EditMain article Protein kinase inhibitor Tyrosine kinases are particularly important today because of their implications in the treatment of cancer A mutation that causes certain tyrosine kinases to be constitutively active has been associated with several cancers Imatinib brand names Gleevec and Glivec is a drug able to bind the catalytic cleft of these tyrosine kinases inhibiting its activity 14 Tyrosine kinase activity is also significantly involved in other events that are sometimes considered highly unfavorable For instance enhanced activity of the enzyme has been implicated in the derangement of the function of certain systems such as cell division Also included are numerous diseases related to local inflammation such as atherosclerosis and psoriasis or systemic inflammation such as sepsis and septic shock 4 A number of viruses target tyrosine kinase function during infection The polyoma virus affects tyrosine kinase activity inside the nuclear matrix 3 Fibroblasts are cells involved in wound healing and cell structure formation in mammalian cells When these cells are transformed by the polyoma virus higher tyrosine activity is observed in the cellular matrix which is also correlated to cellular proliferation 3 Another virus that targets tyrosine kinase is the Rous sarcoma virus a retrovirus that causes sarcoma in chickens Infected cells display obvious structure modifications and cell growth regulation that is extremely unusual 5 Protein tyrosine kinases that are encoded by the Rous sarcoma virus cause cellular transformation and are termed oncoproteins 5 In addition tyrosine kinase can sometimes function incorrectly in such a way that leads to non small cell lung cancer 15 A common widespread cancer non small cell lung cancer is the cause of death in more people than the total number in breast colorectal and prostate cancer together 15 Research has shown that protein phosphorylation occurs on residues of tyrosine by both transmembrane receptor and membrane associated protein tyrosine kinases in normal cells Phosphorylation plays a significant role in cellular signalling that regulates the number and variety of growth factors This is evidenced by the observation that cells affected by the Rous sarcoma virus display obvious structural modifications and a total lack of normal cell growth regulation 5 Rous sarcoma virus encoded oncoproteins are protein tyrosine kinases that are the cause of and are required for this cellular transformation Tyrosine phosphorylation activity also increases or decreases in conjunction with changes in cell composition and growth regulation In this way a certain transformation exhibited by cells is dependent on a role that tyrosine kinase demonstrates 5 Protein tyrosine kinases have a major role in the activation of lymphocytes In addition they are functional in mediating communication pathways in cell types such as adrenal chromaffin platelets and neural cells A tyrosine kinase can become an unregulated enzyme within an organism due to influences discussed such as mutations and more This behavior causes havoc essential processes become disorganized Systems on which the organism relies malfunction resulting often in cancers Preventing this type of circumstance is highly desirable Much research has already noted the significant effect that inhibitors of the radically functioning protein tyrosine kinase enzymes have on related ailments citation needed See Tyrosine kinase inhibitor Non small cell lung cancer Edit Cancer s response to an inhibitor of tyrosine kinase was assessed in a clinical trial 15 In this case Gefitinib is the inhibitor of tyrosine kinase Incorrect tyrosine kinase function can lead to non small cell lung cancer 16 Gefitinib is a tyrosine kinase inhibitor that targets the epidermal growth factor receptor inducing favorable outcomes in patients with non small cell lung cancers A common widespread cancer non small cell lung cancer is the cause of death in more people than breast colorectal and prostate cancer together 15 This is strong motivation to perform research on tyrosine kinase inhibitors as potential targets in cancer treatment Gefitinib functioning as an epidermal growth factor receptor tyrosine kinase inhibitor improved symptoms related to non small cell lung cancer and resulted in radiographic tumor regressions 15 This is an example of the efficacy of such an inhibitor The process of inhibition shows how the cancer sustains Mutations in the epidermal growth factor receptor activate signalling pathways that promote cell survival Non small cell lung cancer cells become dependent on these survival signals Gefitinib s inhibition of the survival signals may be a contributing factor to its efficacy as a drug for non small cell cancer treatment 16 Gefitinib is well endured by humans and treatment resulted in a symptom improvement rate of 43 with 95 confidence in a 33 53 interval for patients that received 250 mg of Gefitinib and 35 with 95 confidence in a 26 45 interval for those that received 500 mg 15 In the trial epidermal growth factor receptor showed a rapid response to the inhibitor as demonstrated by the improvement of the cancer symptoms In each group improvements were noted after a single week of epidermal growth factor receptor tyrosine kinase inhibitor treatment 15 Gefitinib application once per day caused rapid symptom improvement and tumor regressions in non small cell lung cancer patients 15 In the field of medical research this is an especially significant example of the use of an inhibitor to treat tyrosine kinase associated cancer Chemotherapy surgery and radiotherapy were the only major options available prior to the discoveries made in this trial The side effects of Gefitinib oral treatment once per day were considered significant Diarrhea was reported in 57 of patients in the 250 mg group and in 75 of the 500 mg group 15 One patient had diarrhea more severe than Grade 2 with up to six bowel movements in only one day 15 Also a death occurred possibly due to epidermal growth factor receptor tyrosine kinase inhibitor treatment however the correlation is not exactly clear 15 In addition skin toxicity was observed in 62 of patients in the 250 mg group Nevertheless the side effects of Gefitinib were only generally mild manageable noncumulative and reversible 15 Unfortunately ceasing to take the inhibitor may be the only reversal strategy of the unfavorable symptoms 15 Gefitinib still represents a reasonably safe and effective treatment compared to other cancer therapies Furthermore epidermal growth factor receptor plays a crucial role in tumorigenesis which is the production of a new tumor 17 By 2010 Two monoclonal antibodies and another small molecule tyrosine kinase inhibitor called Erlotinib had also been developed to treat cancer 17 July 12 2013 FDA approved afatinib multiple receptor irreversible TKI for the first line treatment of patients with metastatic non small cell lung cancer NSCLC whose tumors have epidermal growth factor receptor EGFR mutation Chronic myeloid leukemia Edit BCR ABL is a constitutively activated tyrosine kinase that is associated with chronic myeloid leukemia It is formed from a fusion gene when pieces of chromosomes 9 and 22 break off and trade places The ABL gene from chromosome 9 joins to the BCR gene on chromosome 22 to form the BCR ABL fusion gene 18 Tyrosine kinase activity is crucial for the transformation of BCR ABL Therefore inhibiting it improves cancer symptoms Among currently available inhibitors to treat CML are imatinib dasatinib nilotinib bosutinib and ponatinib 19 Gastrointestinal stromal tumors Edit Gastrointestinal stromal tumors GIST are known to withstand cancer chemotherapy treatment and do not respond to any kind of therapy in 2001 in advanced cases However tyrosine kinase inhibitor STI571 imatinib is effective in the treatment of patients with metastatic gastrointestinal stromal tumors 20 Gastrointestinal stromal tumors consist of a cluster of mesenchymal neoplasms that are formed from precursors to cells that make up the connective tissue in the gastrointestinal tract 20 Most of these tumors are found in the stomach though they can also be located in the small intestine or elsewhere in the intestinal tract The cells of these tumors have a growth factor receptor associated with tyrosine kinase activity 20 This growth factor receptor is called c kit and is produced by a proto oncogene c kit Mutation of c kit causes the constitutive activity of tyrosine kinase which results in cancerous gastrointestinal stromal tumors Results of c kit mutation include unrestricted tyrosine kinase activity and cell proliferation unregulated phosphorylation of c kit and disruption of some communication pathways 20 Therapy with imatinib can inhibit the non normal cell signaling mechanisms in gastrointestinal stromal tumors This results in significant responses in patients and sustained disease control By 2001 it was no longer doubted that this inhibitor can be effective and safe in humans 7 In similar manner protein tyrosine kinase inhibitor STI571 was found to significantly reduce the physical size of tumors they decreased roughly 65 in size in 4 months of trialing and continued to diminish New lesions did not appear and a number of the liver metastases completely reduced to non existence The single patient in the study remained healthy following treatment 20 There are no effective means of treatment for advanced gastrointestinal stromal tumors but that STI571 represents an effective treatment in early stage cancer associated with constitutively active c kit by inhibiting unfavourable tyrosine kinase activity 20 This section needs to be updated Please help update this article to reflect recent events or newly available information February 2016 Inhibitors EditMain article Tyrosine kinase inhibitor To reduce enzyme activity inhibitor molecules bind to enzymes Reducing enzyme activity can disable a pathogen or correct an incorrectly function system as such many enzyme inhibitors are developed to be used as drugs by the general public GIST and Imatinib Edit Gastrointestinal stromal tumors GIST are mesenchymal tumors that affect the gastrointestinal tract 21 Treatment options have been limited 21 However Imatinib as an inhibitor to the malfunctioning enzyme can be effective 21 Chronic myelogenous leukemia and nilotinib Edit If imatinib does not work patients with advanced chronic myelogenous leukemia can use nilotinib dasatinib bosutinib ponatinib or another inhibitor to the malfunction enzyme that causes the leukemia 22 This inhibitor is a highly selective Bcr Abl tyrosine kinase inhibitor 22 Others Edit Sunitinib is an oral tyrosine kinase inhibitor that acts upon vascular endothelial growth factor receptor VEGFR platelet derived growth factor receptor PDGFR stem cell factor receptor and colony stimulating factor 1 receptor Burstein et al 2008 Gefitinib and erlotinib inhibit the tyrosine kinase domain of epidermal growth factor receptor EGFR and can be used to treat lung and pancreatic cancer where there is often over expression of this cell surface receptor tyrosine kinase Kinase inhibitors can also be mediated Paracrine signalling mediates the response to epidermal growth factor receptor kinase inhibitors Paracrine activates epidermal growth factor receptor in endothelial cells of the tumor to do this 23 Dasatinib is a Src tyrosine kinase inhibitor that is effective both as a senolytic and as therapy for chronic myelogenous leukemia 24 Examples EditHuman proteins containing this domain include AATK ABL ABL2 ALK AXL BLK BMX BTK CSF1R CSK DDR1 DDR2 EGFR EPHA1 EPHA2 EPHA3 EPHA4 EPHA5 EPHA6 EPHA7 EPHA8 EPHA10 EPHB1 EPHB2 EPHB3 EPHB4 EPHB6 ERBB2 ERBB3 ERBB4 FER FES FGFR1 FGFR2 FGFR3 FGFR4 FGR FLT1 FLT3 FLT4 FRK FYN GSG2 HCK IGF1R ILK INSR INSRR IRAK4 ITK JAK1 JAK2 JAK3 KDR KIT KSR1 LCK LMTK2 LMTK3 LTK LYN MATK MERTK MET MLTK MST1R MUSK NPR1 NTRK1 NTRK2 NTRK3 PDGFRA PDGFRB PKDCC PLK4 PTK2 PTK2B PTK6 PTK7 RET ROR1 ROR2 ROS1 RYK SRC SRMS STYK1 SYK TEC TEK TEX14 TIE1 TNK1 TNK2 TNNI3K TXK TYK2 TYRO3 YES1 ZAP70See also EditTyrphostins Bcr Abl tyrosine kinase inhibitors BYKdbReferences Edit Hanks SK Quinn AM Hunter T July 1988 The protein kinase family conserved features and deduced phylogeny of the catalytic domains Science 241 4861 42 52 Bibcode 1988Sci 241 42H doi 10 1126 science 3291115 PMID 3291115 a b c d e f g h i j k l m n o p q Cox M Nelson DR 2008 Lehninger Principles of Biochemistry fifth ed W H Freeman amp Co ISBN 978 1 4292 2416 1 a b c d e f g h i j k l m n o Radha V Nambirajan S Swarup G March 1996 Association of Lyn tyrosine kinase with the nuclear matrix and cell cycle dependent changes in matrix associated tyrosine kinase activity European Journal of Biochemistry 236 2 352 359 doi 10 1111 j 1432 1033 1996 00352 x PMID 8612602 a b c Ruetten H Thiemermann C September 1997 Effects of tyrphostins and genistein on the circulatory failure and organ dysfunction caused by endotoxin in the rat a possible role for protein tyrosine kinase British Journal of Pharmacology 122 1 59 70 doi 10 1038 sj bjp 0701345 PMC 1564904 PMID 9298529 a b c d e Schaller MD Borgman CA Cobb BS Vines RR Reynolds AB Parsons JT June 1992 pp125FAK a structurally distinctive protein tyrosine kinase associated with focal adhesions Proceedings of the National Academy of Sciences of the United States of America 89 11 5192 5196 Bibcode 1992PNAS 89 5192S doi 10 1073 pnas 89 11 5192 PMC 49256 PMID 1594631 Dengjel J Kratchmarova I Blagoev B October 2009 Receptor tyrosine kinase signaling a view from quantitative proteomics Molecular BioSystems 5 10 1112 1121 doi 10 1039 b909534a PMID 19756300 a b c d e Wiley HS Burke PM January 2001 Regulation of receptor tyrosine kinase signaling by endocytic trafficking Traffic 2 1 12 18 doi 10 1034 j 1600 0854 2001 020103 x PMID 11208164 S2CID 7329602 Rinker S Ke Y Liu Y Chhabra R Yan H July 2008 Self assembled DNA nanostructures for distance dependent multivalent ligand protein binding Nature Nanotechnology 3 7 418 422 doi 10 1038 nnano 2008 164 PMC 2556356 PMID 18654566 a b c Silvennoinen O Saharinen P Paukku K Takaluoma K Kovanen P July 1997 Cytokine receptor signal transduction through Jak tyrosine kinases and Stat transcription factors APMIS 105 7 497 509 doi 10 1111 j 1699 0463 1997 tb05047 x PMID 9269296 S2CID 21902484 Modi V Dunbrack RL April 2019 Defining a new nomenclature for the structures of active and inactive kinases Proceedings of the National Academy of Sciences of the United States of America 116 14 6818 6827 doi 10 1073 pnas 1814279116 PMC 6452665 PMID 30867294 Bhise SB Nalawade AD Wadhawa H December 2004 Role of protein tyrosine kinase inhibitors in cancer therapeutics Indian Journal of Biochemistry amp Biophysics 41 6 273 280 PMID 22900354 Gunby RH Sala E Tartari CJ Puttini M Gambacorti Passerini C Mologni L November 2007 Oncogenic fusion tyrosine kinases as molecular targets for anti cancer therapy Anti Cancer Agents in Medicinal Chemistry 7 6 594 611 doi 10 2174 187152007784111340 PMID 18045055 Tontonoz Matthew December 27 2017 How a Chicken Helped Solve the Mystery of Cancer Memorial Sloan Kettering Cancer Center Retrieved 27 October 2022 Weinberg RA 2007 The Biology of Cancer New York Garland Science Taylor amp Francis Group LLC pp 757 759 ISBN 978 0 8153 4076 8 a b c d e f g h i j k l m Kris MG Natale RB Herbst RS Lynch TJ Prager D Belani CP et al October 2003 Efficacy of gefitinib an inhibitor of the epidermal growth factor receptor tyrosine kinase in symptomatic patients with non small cell lung cancer a randomized trial JAMA 290 16 2149 2158 doi 10 1001 jama 290 16 2149 PMID 14570950 a b Sordella R Bell DW Haber DA Settleman J August 2004 Gefitinib sensitizing EGFR mutations in lung cancer activate anti apoptotic pathways Science 305 5687 1163 1167 Bibcode 2004Sci 305 1163S doi 10 1126 science 1101637 PMID 15284455 S2CID 34389318 a b Okamoto I January 2010 Epidermal growth factor receptor in relation to tumor development EGFR targeted anticancer therapy The FEBS Journal 277 2 309 315 doi 10 1111 j 1742 4658 2009 07449 x PMID 19922468 Druker BJ Talpaz M Resta DJ Peng B Buchdunger E Ford JM et al April 2001 Efficacy and safety of a specific inhibitor of the BCR ABL tyrosine kinase in chronic myeloid leukemia PDF The New England Journal of Medicine 344 14 1031 1037 doi 10 1056 NEJM200104053441401 PMID 11287972 S2CID 8399298 Archived from the original PDF on 2019 02 19 Garcia Gutierrez Valentin Breccia Massimo Jabbour Elias Mauro Michael Cortes Jorge E 11 July 2022 A clinician perspective on the treatment of chronic myeloid leukemia in the chronic phase Journal of Hematology amp Oncology 15 1 90 doi 10 1186 s13045 022 01309 0 PMC 9272596 PMID 35818053 a b c d e f Joensuu H Roberts PJ Sarlomo Rikala M Andersson LC Tervahartiala P Tuveson D et al April 2001 Effect of the tyrosine kinase inhibitor STI571 in a patient with a metastatic gastrointestinal stromal tumor The New England Journal of Medicine 344 14 1052 1056 doi 10 1056 NEJM200104053441404 PMID 11287975 a b c Blanke CD Demetri GD von Mehren M Heinrich MC Eisenberg B Fletcher JA et al February 2008 Long term results from a randomized phase II trial of standard versus higher dose imatinib mesylate for patients with unresectable or metastatic gastrointestinal stromal tumors expressing KIT Journal of Clinical Oncology 26 4 620 625 CiteSeerX 10 1 1 690 6356 doi 10 1200 JCO 2007 13 4403 PMID 18235121 a b le Coutre P Ottmann OG Giles F Kim DW Cortes J Gattermann N et al February 2008 Nilotinib formerly AMN107 a highly selective BCR ABL tyrosine kinase inhibitor is active in patients with imatinib resistant or intolerant accelerated phase chronic myelogenous leukemia Blood 111 4 1834 1839 doi 10 1182 blood 2007 04 083196 PMID 18048643 Kuwai T Nakamura T Sasaki T Kim SJ Fan D Villares GJ et al May 2008 Phosphorylated epidermal growth factor receptor on tumor associated endothelial cells is a primary target for therapy with tyrosine kinase inhibitors Neoplasia 10 5 489 500 doi 10 1593 neo 08200 PMC 2373870 PMID 18472966 Rivera Torres J San Jose E 2019 Src Tyrosine Kinase Inhibitors New Perspectives on Their Immune Antiviral and Senotherapeutic Potential Frontiers in Pharmacology 10 1011 doi 10 3389 fphar 2019 01011 PMC 6759511 PMID 31619990 External links EditEukaryotic Linear Motif resource motif class MOD TYR CSK Tyrosine Kinases on KinCore the Kinase Conformation Resource A web resource for protein kinase sequence structure and phylogeny The Tyrosine Kinase group Overview of all the structural information available in the PDB for UniProt P08631 Tyrosine protein kinase HCK at the PDBe KB Overview of all the structural information available in the PDB for UniProt P00520 Tyrosine protein kinase ABL1 at the PDBe KB Overview of all the structural information available in the PDB for UniProt O60674 Tyrosine protein kinase JAK2 at the PDBe KB Portal nbsp Biology Retrieved from https en wikipedia org w index php title Tyrosine kinase amp oldid 1176883602, wikipedia, wiki, book, books, library,

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