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MMP9

Matrix metalloproteinase-9 (MMP-9), also known as 92 kDa type IV collagenase, 92 kDa gelatinase or gelatinase B (GELB), is a matrixin, a class of enzymes that belong to the zinc-metalloproteinases family involved in the degradation of the extracellular matrix. In humans the MMP9 gene[5] encodes for a signal peptide, a propeptide, a catalytic domain with inserted three repeats of fibronectin type II domain followed by a C-terminal hemopexin-like domain.[6]

MMP9
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesMMP9, CLG4B, GELB, MANDP2, MMP-9, 92 kDa type IV collagenase, 92 kDa gelatinase, gelatinase B, matrix metallopeptidase 9
External IDsOMIM: 120361; MGI: 97011; HomoloGene: 3659; GeneCards: MMP9; OMA:MMP9 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_004994

NM_013599

RefSeq (protein)

NP_004985

NP_038627

Location (UCSC)Chr 20: 46.01 – 46.02 MbChr 2: 164.78 – 164.8 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Function edit

Proteins of the matrix metalloproteinase (MMP) family are involved in the breakdown of extracellular matrix in normal physiological processes, such as embryonic development, reproduction, angiogenesis, bone development, wound healing, cell migration, learning and memory, as well as in pathological processes, such as arthritis, intracerebral hemorrhage,[7] and metastasis.[8] Most MMPs are secreted as inactive proproteins which are activated when cleaved by extracellular proteinases. The enzyme encoded by this gene degrades type IV and V collagens and other extracellular matrix proteins.[9] Studies in rhesus monkeys suggest that the enzyme is involved in IL-8-induced mobilization of hematopoietic progenitor cells from bone marrow, and murine studies suggest a role in tumor-associated tissue remodeling.[5]

Thrombospondins, intervertebral disc proteins, regulate interaction with matrix metalloproteinases (MMPs) 2 and 9, which are key effectors of ECM remodeling.[10]

Neutrophil action edit

MMP9, along with elastase, appears to be a regulatory factor in neutrophil migration across the basement membrane.[11]

MMP9 plays several important functions within neutrophil action, such as degrading extracellular matrix, activation of IL-1β, and cleavage of several chemokines.[12] In a mouse model, MMP9 deficiency resulted in resistance to endotoxin shock, suggesting that MMP9 is important in sepsis.[13]

Angiogenesis edit

MMP9 may play an important role in angiogenesis and neovascularization. For example, MMP9 appears to be involved in the remodeling associated with malignant glioma neovascularization.[14] It is also a key regulator of growth plate formation- both growth plate angiogenesis and the generation of hypertrophic chondrocytes. Knock-out models of MMP9 result in delayed apoptosis, vascularization, and ossification of hypertrophic chondrocytes.[15] Lastly, there is significant evidence that Gelatinase B is required for the recruitment of endothelial stem cells, a critical component of angiogenesis [16]

Wound repair edit

MMP9 is greatly upregulated during human respiratory epithelial healing.[17] Using a MMP9 deficient mouse model, it was seen that MMP9 coordinated epithelial wound repair and deficient mice were unable to remove the fibrinogen matrix during wound healing.[18] When interacting with TGF-ß1, Gelatinase B also stimulates collagen contraction, aiding in wound closure.[19]

Structure edit

 
ProMMP9 (pro-peptide (red), catalytic domain (green) with fibronectin domains (cyan), with detail of the "cysteine switch" (from PDB entry 1L6J)

MMP9 is synthesized as preproenzyme of 707 amino-acid residues, including a 19 amino acid signal peptide and secreted as an inactive pro-MMP. The human MMP9 proenzyme consists of five domains. The amino-terminal propeptide, the zinc-binding catalytic domain and the carboxyl-terminal hemopexin-like domain are conserved. Its primary structure comprises several domain motifs. The propeptide domain is characterized by a conserved PRCGVPD sequence. The Cys within this sequence is known as the “cysteine switch”. It ligates the catalytic zinc to maintain the enzyme in an inactive state.[6]

 
MMP-9 catalytic domain in complex with a fluorogenic synthetic peptidic substrate. From PDB entry 4JIJ.[20]

Activation is achieved through an interacting protease cascade involving plasmin and stromelysin 1 (MMP-3). Plasmin generates active MMP-3 from its zymogen. Active MMP-3 cleaves the propeptide from the 92-kDa pro-MMP-9, yielding an 82-kDa enzymatically active enzyme.[21] In the active enzyme a substrate, or a fluorogenic activity probe.,[20] replaces the propeptide in the enzyme active site where it is cleaved. The catalytic domain contains two zinc and three calcium atoms. The catalytic zinc is coordinated by three histidines from the conserved HEXXHXXGXXH binding motif. The other zinc atom and the three calcium atoms are structural. A conserved methionine, which forms a unique “Met-turn” structure categorizes MMP9 as a metzincin.[22] Three type II fibronectin repeats are inserted in the catalytic domain, although these domains are omitted in most crystallographic structures of MMP9 in complex with inhibitors. The active form of MMP9 also contains a C-terminal hemopexin-like domain. This domain is ellipsoidal in shape, formed by four β-propeller blades and an α-helix. Each blade consists of four antiparallel β-strands arranged around a funnel-like tunnel that contains two calcium and two chloride ions.[23] The hemopexin domain is important to facilitate the cleavage of triple helical interstitial collagens. .

Clinical significance edit

MMP9 has been found to be associated with numerous pathological processes, including cancer, placental malaria, immunologic and cardiovascular diseases.

Arthritis edit

Elevated MMP9 levels can be found in the cases of rheumatoid arthritis[24] and focal brain ischemia.[25]

Cancer edit

One of MMP9's most widely associated pathologies is the relationship to cancer, due to its role in extracellular matrix remodeling and angiogenesis. For example, its increased expression was seen in a metastatic mammary cancer cell line.[26] Gelatinase B plays a central role in tumor progression, from angiogenesis, to stromal remodeling, and ultimately metastasis.[27] However, because of its physiologic function, it may be difficult to leverage Gelatinase B inhibition into cancer therapy modalities. However, Gelatinase B has been investigated in tumor metastasis diagnosis- Complexes of Gelatinase B/Tissue Inhibitors of Metalloproteinases are seen to be increased in gastrointestinal cancer and gynecologic malignancies [28]

MMPs such as MMP9 can be involved in the development of several human malignancies, as degradation of collagen IV in basement membrane and extracellular matrix facilitates tumor progression, including invasion, metastasis, growth and angiogenesis.[29]

Cardiovascular edit

MMP9 levels increase with the progression of idiopathic atrial fibrillation.[30]

MMP9 has been found to be associated with the development of aortic aneurysms,[31] and its disruption prevents the development of aortic aneurysms.[32] Doxycycline suppresses the growth of aortic aneurysms in animal models through its inhibition of MMP9 reduces aortic inflammation in humans.[33]

Pregnancy-associated malaria (Placental malaria) edit

A study on Ghanaian population showed that MMP-9 single nucleotide polymorphism 1562 C > T (rs3918242) was protective against placental malaria which suggests a possible role of MMP-9 in susceptibility to malaria.[34]

Dry eye edit

Dry eye patients, especially with meibomian gland dysfunction exhibit higher levels of MMP-9.[35]

References edit

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000100985 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000017737 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "Matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)".
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  7. ^ Wang J, Tsirka SE (July 2005). "Neuroprotection by inhibition of matrix metalloproteinases in a mouse model of intracerebral haemorrhage". Brain. 128 (Pt 7): 1622–33. doi:10.1093/brain/awh489. PMID 15800021.
  8. ^ Vandooren J, Van den Steen PE, Opdenakker G (2013). "Biochemistry and molecular biology of gelatinase B or matrix metalloproteinase-9 (MMP-9): the next decade". Critical Reviews in Biochemistry and Molecular Biology. 48 (3): 222–72. doi:10.3109/10409238.2013.770819. PMID 23547785. S2CID 33781725.
  9. ^ Van den Steen PE, Dubois B, Nelissen I, Rudd PM, Dwek RA, Opdenakker G (December 2002). "Biochemistry and molecular biology of gelatinase B or matrix metalloproteinase-9 (MMP-9)". Critical Reviews in Biochemistry and Molecular Biology. 37 (6): 375–536. doi:10.1080/10409230290771546. PMID 12540195. S2CID 35833950.
  10. ^ Hirose Y, Chiba K, Karasugi T, Nakajima M, Kawaguchi Y, Mikami Y, Furuichi T, Mio F, Miyake A, Miyamoto T, Ozaki K, Takahashi A, Mizuta H, Kubo T, Kimura T, Tanaka T, Toyama Y, Ikegawa S (May 2008). "A functional polymorphism in THBS2 that affects alternative splicing and MMP binding is associated with lumbar-disc herniation". American Journal of Human Genetics. 82 (5): 1122–9. doi:10.1016/j.ajhg.2008.03.013. PMC 2427305. PMID 18455130.
  11. ^ Delclaux C, Delacourt C, D'Ortho MP, Boyer V, Lafuma C, Harf A (March 1996). "Role of gelatinase B and elastase in human polymorphonuclear neutrophil migration across basement membrane". American Journal of Respiratory Cell and Molecular Biology. 14 (3): 288–95. doi:10.1165/ajrcmb.14.3.8845180. PMID 8845180.
  12. ^ Opdenakker G, Van den Steen PE, Dubois B, Nelissen I, Van Coillie E, Masure S, Proost P, Van Damme J (June 2001). "Gelatinase B functions as regulator and effector in leukocyte biology". Journal of Leukocyte Biology. 69 (6): 851–9. doi:10.1189/jlb.69.6.851. PMID 11404367. S2CID 15851048.
  13. ^ Dubois B, Starckx S, Pagenstecher A, Oord Jv, Arnold B, Opdenakker G (August 2002). "Gelatinase B deficiency protects against endotoxin shock". European Journal of Immunology. 32 (8): 2163–71. doi:10.1002/1521-4141(200208)32:8<2163::AID-IMMU2163>3.0.CO;2-Q. PMID 12209628.
  14. ^ Forsyth PA, Wong H, Laing TD, Rewcastle NB, Morris DG, Muzik H, Leco KJ, Johnston RN, Brasher PM, Sutherland G, Edwards DR (April 1999). "Gelatinase-A (MMP-2), gelatinase-B (MMP-9) and membrane type matrix metalloproteinase-1 (MT1-MMP) are involved in different aspects of the pathophysiology of malignant gliomas". British Journal of Cancer. 79 (11–12): 1828–35. doi:10.1038/sj.bjc.6690291. PMC 2362801. PMID 10206300.
  15. ^ Vu TH, Shipley JM, Bergers G, Berger JE, Helms JA, Hanahan D, Shapiro SD, Senior RM, Werb Z (May 1998). "MMP-9/gelatinase B is a key regulator of growth plate angiogenesis and apoptosis of hypertrophic chondrocytes". Cell. 93 (3): 411–22. doi:10.1016/s0092-8674(00)81169-1. PMC 2839071. PMID 9590175.
  16. ^ Heissig B, Hattori K, Dias S, Friedrich M, Ferris B, Hackett NR, Crystal RG, Besmer P, Lyden D, Moore MA, Werb Z, Rafii S (May 2002). "Recruitment of stem and progenitor cells from the bone marrow niche requires MMP-9 mediated release of kit-ligand". Cell. 109 (5): 625–37. doi:10.1016/s0092-8674(02)00754-7. PMC 2826110. PMID 12062105.
  17. ^ Buisson AC, Zahm JM, Polette M, Pierrot D, Bellon G, Puchelle E, Birembaut P, Tournier JM (February 1996). "Gelatinase B is involved in the in vitro wound repair of human respiratory epithelium". Journal of Cellular Physiology. 166 (2): 413–26. doi:10.1002/(sici)1097-4652(199602)166:2<413::aid-jcp20>3.0.co;2-a. PMID 8592002. S2CID 24996115.
  18. ^ Mohan R, Chintala SK, Jung JC, Villar WV, McCabe F, Russo LA, Lee Y, McCarthy BE, Wollenberg KR, Jester JV, Wang M, Welgus HG, Shipley JM, Senior RM, Fini ME (January 2002). "Matrix metalloproteinase gelatinase B (MMP-9) coordinates and effects epithelial regeneration". The Journal of Biological Chemistry. 277 (3): 2065–72. doi:10.1074/jbc.m107611200. PMID 11689563.
  19. ^ Kobayashi T, Kim H, Liu X, Sugiura H, Kohyama T, Fang Q, Wen FQ, Abe S, Wang X, Atkinson JJ, Shipley JM, Senior RM, Rennard SI (June 2014). "Matrix metalloproteinase-9 activates TGF-β and stimulates fibroblast contraction of collagen gels". American Journal of Physiology. Lung Cellular and Molecular Physiology. 306 (11): L1006-15. doi:10.1152/ajplung.00015.2014. PMC 4042193. PMID 24705725.
  20. ^ a b Tranchant I, Vera L, Czarny B, Amoura M, Cassar E, Beau F, Stura EA, Dive V (March 2014). "Halogen bonding controls selectivity of FRET substrate probes for MMP-9". Chemistry & Biology. 21 (3): 408–13. doi:10.1016/j.chembiol.2014.01.008. PMID 24583051.
  21. ^ Ramos-DeSimone N, Hahn-Dantona E, Sipley J, Nagase H, French DL, Quigley JP (May 1999). "Activation of matrix metalloproteinase-9 (MMP-9) via a converging plasmin/stromelysin-1 cascade enhances tumor cell invasion". The Journal of Biological Chemistry. 274 (19): 13066–76. doi:10.1074/jbc.274.19.13066. PMID 10224058.
  22. ^ Bode W, Gomis-Rüth FX, Stöckler W (September 1993). "Astacins, serralysins, snake venom and matrix metalloproteinases exhibit identical zinc-binding environments (HEXXHXXGXXH and Met-turn) and topologies and should be grouped into a common family, the 'metzincins'". FEBS Letters. 331 (1–2): 134–40. doi:10.1016/0014-5793(93)80312-I. PMID 8405391. S2CID 27244239.
  23. ^ Gomis-Rüth FX, Gohlke U, Betz M, Knäuper V, Murphy G, López-Otín C, Bode W (December 1996). "The helping hand of collagenase-3 (MMP-13): 2.7 A crystal structure of its C-terminal haemopexin-like domain". Journal of Molecular Biology. 264 (3): 556–66. doi:10.1006/jmbi.1996.0661. PMID 8969305.
  24. ^ Gruber BL, Sorbi D, French DL, Marchese MJ, Nuovo GJ, Kew RR, Arbeit LA (February 1996). "Markedly elevated serum MMP-9 (gelatinase B) levels in rheumatoid arthritis: a potentially useful laboratory marker". Clinical Immunology and Immunopathology. 78 (2): 161–71. doi:10.1006/clin.1996.0025. PMID 8625558.
  25. ^ Clark AW, Krekoski CA, Bou SS, Chapman KR, Edwards DR (November 1997). "Increased gelatinase A (MMP-2) and gelatinase B (MMP-9) activities in human brain after focal ischemia". Neuroscience Letters. 238 (1–2): 53–6. doi:10.1016/s0304-3940(97)00859-8. PMID 9464653. S2CID 916260.
  26. ^ Morini M, Mottolese M, Ferrari N, Ghiorzo F, Buglioni S, Mortarini R, Noonan DM, Natali PG, Albini A (August 2000). "The alpha 3 beta 1 integrin is associated with mammary carcinoma cell metastasis, invasion, and gelatinase B (MMP-9) activity". International Journal of Cancer. 87 (3): 336–42. doi:10.1002/1097-0215(20000801)87:3<336::aid-ijc5>3.3.co;2-v. PMID 10897037.
  27. ^ Farina AR, Mackay AR (January 2014). "Gelatinase B/MMP-9 in Tumour Pathogenesis and Progression". Cancers. 6 (1): 240–96. doi:10.3390/cancers6010240. PMC 3980597. PMID 24473089.
  28. ^ Zucker S, Lysik RM, DiMassimo BI, Zarrabi HM, Moll UM, Grimson R, Tickle SP, Docherty AJ (August 1995). "Plasma assay of gelatinase B: tissue inhibitor of metalloproteinase complexes in cancer". Cancer. 76 (4): 700–8. doi:10.1002/1097-0142(19950815)76:4<700::aid-cncr2820760426>3.0.co;2-5. PMID 8625169. S2CID 41700819.
  29. ^ Groblewska M, Siewko M, Mroczko B, Szmitkowski M (April 2012). "The role of matrix metalloproteinases (MMPs) and their inhibitors (TIMPs) in the development of esophageal cancer". Folia Histochemica et Cytobiologica. 50 (1): 12–9. doi:10.5603/fhc.2012.0002. PMID 22532131.
  30. ^ Li M, Yang G, Xie B, Babu K, Huang C (February 2014). "Changes in matrix metalloproteinase-9 levels during progression of atrial fibrillation". The Journal of International Medical Research. 42 (1): 224–30. doi:10.1177/0300060513488514. PMID 24345823.
  31. ^ Newman KM, Ogata Y, Malon AM, Irizarry E, Gandhi RH, Nagase H, Tilson MD (August 1994). "Identification of matrix metalloproteinases 3 (stromelysin-1) and 9 (gelatinase B) in abdominal aortic aneurysm". Arteriosclerosis and Thrombosis. 14 (8): 1315–20. doi:10.1161/01.atv.14.8.1315. PMID 8049193.
  32. ^ Pyo R, Lee JK, Shipley JM, Curci JA, Mao D, Ziporin SJ, Ennis TL, Shapiro SD, Senior RM, Thompson RW (June 2000). "Targeted gene disruption of matrix metalloproteinase-9 (gelatinase B) suppresses development of experimental abdominal aortic aneurysms". The Journal of Clinical Investigation. 105 (11): 1641–9. doi:10.1172/jci8931. PMC 300851. PMID 10841523.
  33. ^ Lindeman JH, Abdul-Hussien H, van Bockel JH, Wolterbeek R, Kleemann R (April 2009). "Clinical trial of doxycycline for matrix metalloproteinase-9 inhibition in patients with an abdominal aneurysm: doxycycline selectively depletes aortic wall neutrophils and cytotoxic T cells". Circulation. 119 (16): 2209–16. doi:10.1161/CIRCULATIONAHA.108.806505. PMID 19364980.
  34. ^ Apoorv TS, Babu PP, Meese S, Gai PP, Bedu-Addo G, Mockenhaupt FP (July 2015). "Matrix metalloproteinase-9 polymorphism 1562 C > T (rs3918242) associated with protection against placental malaria". The American Journal of Tropical Medicine and Hygiene. 93 (1): 186–8. doi:10.4269/ajtmh.14-0816. PMC 4497894. PMID 26013370.
  35. ^ Messmer, Elisabeth M.; von Lindenfels, Victoria; Garbe, Alexandra; Kampik, Anselm (November 2016). "Matrix Metalloproteinase 9 Testing in Dry Eye Disease Using a Commercially Available Point-of-Care Immunoassay". Ophthalmology. 123 (11): 2300–2308. doi:10.1016/j.ophtha.2016.07.028. PMID 27665213.

Further reading edit

  • Nagase H, Woessner JF (July 1999). "Matrix metalloproteinases". The Journal of Biological Chemistry. 274 (31): 21491–4. doi:10.1074/jbc.274.31.21491. PMID 10419448.
  • Zhao X, Wu T, Chang CF, Wu H, Han X, Li Q, Gao Y, Li Q, Hou Z, Maruyama T, Zhang J, Wang J (May 2015). "Toxic role of prostaglandin E2 receptor EP1 after intracerebral hemorrhage in mice". Brain, Behavior, and Immunity. 46: 293–310. doi:10.1016/j.bbi.2015.02.011. PMC 4422065. PMID 25697396.
  • Starckx S, Van den Steen PE, Wuyts A, Van Damme J, Opdenakker G (February 2002). "Neutrophil gelatinase B and chemokines in leukocytosis and stem cell mobilization". Leukemia & Lymphoma. 43 (2): 233–41. doi:10.1080/10428190290005982. PMID 11999552. S2CID 940921.
  • Wu H, Zhang Z, Li Y, Zhao R, Li H, Song Y, Qi J, Wang J (October 2010). "Time course of upregulation of inflammatory mediators in the hemorrhagic brain in rats: correlation with brain edema". Neurochemistry International. 57 (3): 248–53. doi:10.1016/j.neuint.2010.06.002. PMC 2910823. PMID 20541575.
  • Bischof P, Meisser A, Campana A (2002). "Control of MMP-9 expression at the maternal-fetal interface". Journal of Reproductive Immunology. 55 (1–2): 3–10. doi:10.1016/S0165-0378(01)00142-5. PMID 12062817.
  • St-Pierre Y, Van Themsche C, Estève PO (September 2003). "Emerging features in the regulation of MMP-9 gene expression for the development of novel molecular targets and therapeutic strategies". Current Drug Targets. Inflammation and Allergy. 2 (3): 206–15. doi:10.2174/1568010033484133. PMID 14561155. S2CID 453825.
  • Wu H, Wu T, Hua W, Dong X, Gao Y, Zhao X, Chen W, Cao W, Yang Q, Qi J, Zhou J, Wang J (March 2015). "PGE2 receptor agonist misoprostol protects brain against intracerebral hemorrhage in mice". Neurobiology of Aging. 36 (3): 1439–50. doi:10.1016/j.neurobiolaging.2014.12.029. PMC 4417504. PMID 25623334.
  • Lee JM, Yin K, Hsin I, Chen S, Fryer JD, Holtzman DM, Hsu CY, Xu J (March 2005). "Matrix metalloproteinase-9 in cerebral-amyloid-angiopathy-related hemorrhage". Journal of the Neurological Sciences. 229–230: 249–54. doi:10.1016/j.jns.2004.11.041. PMID 15760647. S2CID 21791281.
  • Nair RR, Boyd DD (November 2005). "Expression cloning of novel regulators of 92 kDa type IV collagenase expression". Biochemical Society Transactions. 33 (Pt 5): 1135–6. doi:10.1042/BST20051135. PMID 16246065.
  • Wu H, Zhang Z, Hu X, Zhao R, Song Y, Ban X, Qi J, Wang J (June 2010). "Dynamic changes of inflammatory markers in brain after hemorrhagic stroke in humans: a postmortem study". Brain Research. 1342: 111–7. doi:10.1016/j.brainres.2010.04.033. PMC 2885522. PMID 20420814.
  • Wu H, Wu T, Han X, Wan J, Jiang C, Chen W, Lu H, Yang Q, Wang J (January 2017). "Cerebroprotection by the neuronal PGE2 receptor EP2 after intracerebral hemorrhage in middle-aged mice". Journal of Cerebral Blood Flow and Metabolism. 37 (1): 39–51. doi:10.1177/0271678X15625351. PMC 5363749. PMID 26746866.
  • Ram M, Sherer Y, Shoenfeld Y (July 2006). "Matrix metalloproteinase-9 and autoimmune diseases". Journal of Clinical Immunology. 26 (4): 299–307. doi:10.1007/s10875-006-9022-6. PMID 16652230. S2CID 19619963.

External links edit

  • The MEROPS online database for peptidases and their inhibitors: M10.009
  • Overview of all the structural information available in the PDB for UniProt: P14780 (Matrix metalloproteinase-9) at the PDBe-KB.

mmp9, matrix, metalloproteinase, also, known, type, collagenase, gelatinase, gelatinase, gelb, matrixin, class, enzymes, that, belong, zinc, metalloproteinases, family, involved, degradation, extracellular, matrix, humans, gene, encodes, signal, peptide, prope. Matrix metalloproteinase 9 MMP 9 also known as 92 kDa type IV collagenase 92 kDa gelatinase or gelatinase B GELB is a matrixin a class of enzymes that belong to the zinc metalloproteinases family involved in the degradation of the extracellular matrix In humans the MMP9 gene 5 encodes for a signal peptide a propeptide a catalytic domain with inserted three repeats of fibronectin type II domain followed by a C terminal hemopexin like domain 6 MMP9Available structuresPDBOrtholog search PDBe RCSBList of PDB id codes1GKC 1GKD 1ITV 1L6J 2OVX 2OVZ 2OW0 2OW1 2OW2 4H1Q 4H2E 4H3X 4H82 4HMA 4JIJ 4JQG 4WZV 4XCT 5CUH 5I12IdentifiersAliasesMMP9 CLG4B GELB MANDP2 MMP 9 92 kDa type IV collagenase 92 kDa gelatinase gelatinase B matrix metallopeptidase 9External IDsOMIM 120361 MGI 97011 HomoloGene 3659 GeneCards MMP9 OMA MMP9 orthologsGene location Human Chr Chromosome 20 human 1 Band20q13 12Start46 008 908 bp 1 End46 016 561 bp 1 Gene location Mouse Chr Chromosome 2 mouse 2 Band2 H3 2 85 27 cMStart164 782 700 bp 2 End164 797 770 bp 2 RNA expression patternBgeeHumanMouse ortholog Top expressed inperiodontal fibertrabecular bonetibiabone marrowbone marrow cellsappendixbloodlymph nodespleenamniotic fluidTop expressed inbody of femurhuman mandiblemolarankleribbone marrowbloodankle jointoptic nerve tractoptic recessMore reference expression dataBioGPSMore reference expression dataGene ontologyMolecular functioncollagen binding zinc ion binding metal ion binding peptidase activity protein binding identical protein binding hydrolase activity metallopeptidase activity endopeptidase activity serine type endopeptidase activity metalloendopeptidase activityCellular componentextracellular matrix extracellular exosome extracellular space tertiary granule lumen ficolin 1 rich granule lumen extracellular region collagen containing extracellular matrixBiological processskeletal system development negative regulation of cation channel activity positive regulation of protein phosphorylation endodermal cell differentiation negative regulation of cysteine type endopeptidase activity involved in apoptotic signaling pathway ossification negative regulation of intrinsic apoptotic signaling pathway ephrin receptor signaling pathway extracellular matrix disassembly negative regulation of apoptotic process proteolysis macrophage differentiation positive regulation of keratinocyte migration positive regulation of apoptotic process collagen catabolic process positive regulation of release of cytochrome c from mitochondria positive regulation of receptor binding positive regulation of DNA binding positive regulation of epidermal growth factor receptor signaling pathway embryo implantation leukocyte migration positive regulation of vascular associated smooth muscle cell proliferation extracellular matrix organization positive regulation of cell migration neutrophil degranulation cellular response to reactive oxygen species cellular response to cadmium ion cytokine mediated signaling pathway regulation of neuroinflammatory response negative regulation of epithelial cell differentiation involved in kidney development response to amyloid betaSources Amigo QuickGOOrthologsSpeciesHumanMouseEntrez431817395EnsemblENSG00000100985ENSMUSG00000017737UniProtP14780P41245RefSeq mRNA NM 004994NM 013599RefSeq protein NP 004985NP 038627Location UCSC Chr 20 46 01 46 02 MbChr 2 164 78 164 8 MbPubMed search 3 4 WikidataView Edit HumanView Edit Mouse Contents 1 Function 1 1 Neutrophil action 1 2 Angiogenesis 1 3 Wound repair 2 Structure 3 Clinical significance 3 1 Arthritis 3 2 Cancer 3 3 Cardiovascular 3 4 Pregnancy associated malaria Placental malaria 3 5 Dry eye 4 References 5 Further reading 6 External linksFunction editProteins of the matrix metalloproteinase MMP family are involved in the breakdown of extracellular matrix in normal physiological processes such as embryonic development reproduction angiogenesis bone development wound healing cell migration learning and memory as well as in pathological processes such as arthritis intracerebral hemorrhage 7 and metastasis 8 Most MMPs are secreted as inactive proproteins which are activated when cleaved by extracellular proteinases The enzyme encoded by this gene degrades type IV and V collagens and other extracellular matrix proteins 9 Studies in rhesus monkeys suggest that the enzyme is involved in IL 8 induced mobilization of hematopoietic progenitor cells from bone marrow and murine studies suggest a role in tumor associated tissue remodeling 5 Thrombospondins intervertebral disc proteins regulate interaction with matrix metalloproteinases MMPs 2 and 9 which are key effectors of ECM remodeling 10 Neutrophil action edit MMP9 along with elastase appears to be a regulatory factor in neutrophil migration across the basement membrane 11 MMP9 plays several important functions within neutrophil action such as degrading extracellular matrix activation of IL 1b and cleavage of several chemokines 12 In a mouse model MMP9 deficiency resulted in resistance to endotoxin shock suggesting that MMP9 is important in sepsis 13 Angiogenesis edit MMP9 may play an important role in angiogenesis and neovascularization For example MMP9 appears to be involved in the remodeling associated with malignant glioma neovascularization 14 It is also a key regulator of growth plate formation both growth plate angiogenesis and the generation of hypertrophic chondrocytes Knock out models of MMP9 result in delayed apoptosis vascularization and ossification of hypertrophic chondrocytes 15 Lastly there is significant evidence that Gelatinase B is required for the recruitment of endothelial stem cells a critical component of angiogenesis 16 Wound repair edit MMP9 is greatly upregulated during human respiratory epithelial healing 17 Using a MMP9 deficient mouse model it was seen that MMP9 coordinated epithelial wound repair and deficient mice were unable to remove the fibrinogen matrix during wound healing 18 When interacting with TGF ss1 Gelatinase B also stimulates collagen contraction aiding in wound closure 19 Structure edit nbsp ProMMP9 pro peptide red catalytic domain green with fibronectin domains cyan with detail of the cysteine switch from PDB entry 1L6J MMP9 is synthesized as preproenzyme of 707 amino acid residues including a 19 amino acid signal peptide and secreted as an inactive pro MMP The human MMP9 proenzyme consists of five domains The amino terminal propeptide the zinc binding catalytic domain and the carboxyl terminal hemopexin like domain are conserved Its primary structure comprises several domain motifs The propeptide domain is characterized by a conserved PRCGVPD sequence The Cys within this sequence is known as the cysteine switch It ligates the catalytic zinc to maintain the enzyme in an inactive state 6 nbsp MMP 9 catalytic domain in complex with a fluorogenic synthetic peptidic substrate From PDB entry 4JIJ 20 Activation is achieved through an interacting protease cascade involving plasmin and stromelysin 1 MMP 3 Plasmin generates active MMP 3 from its zymogen Active MMP 3 cleaves the propeptide from the 92 kDa pro MMP 9 yielding an 82 kDa enzymatically active enzyme 21 In the active enzyme a substrate or a fluorogenic activity probe 20 replaces the propeptide in the enzyme active site where it is cleaved The catalytic domain contains two zinc and three calcium atoms The catalytic zinc is coordinated by three histidines from the conserved HEXXHXXGXXH binding motif The other zinc atom and the three calcium atoms are structural A conserved methionine which forms a unique Met turn structure categorizes MMP9 as a metzincin 22 Three type II fibronectin repeats are inserted in the catalytic domain although these domains are omitted in most crystallographic structures of MMP9 in complex with inhibitors The active form of MMP9 also contains a C terminal hemopexin like domain This domain is ellipsoidal in shape formed by four b propeller blades and an a helix Each blade consists of four antiparallel b strands arranged around a funnel like tunnel that contains two calcium and two chloride ions 23 The hemopexin domain is important to facilitate the cleavage of triple helical interstitial collagens Clinical significance editMMP9 has been found to be associated with numerous pathological processes including cancer placental malaria immunologic and cardiovascular diseases Arthritis edit Elevated MMP9 levels can be found in the cases of rheumatoid arthritis 24 and focal brain ischemia 25 Cancer edit One of MMP9 s most widely associated pathologies is the relationship to cancer due to its role in extracellular matrix remodeling and angiogenesis For example its increased expression was seen in a metastatic mammary cancer cell line 26 Gelatinase B plays a central role in tumor progression from angiogenesis to stromal remodeling and ultimately metastasis 27 However because of its physiologic function it may be difficult to leverage Gelatinase B inhibition into cancer therapy modalities However Gelatinase B has been investigated in tumor metastasis diagnosis Complexes of Gelatinase B Tissue Inhibitors of Metalloproteinases are seen to be increased in gastrointestinal cancer and gynecologic malignancies 28 MMPs such as MMP9 can be involved in the development of several human malignancies as degradation of collagen IV in basement membrane and extracellular matrix facilitates tumor progression including invasion metastasis growth and angiogenesis 29 Cardiovascular edit MMP9 levels increase with the progression of idiopathic atrial fibrillation 30 MMP9 has been found to be associated with the development of aortic aneurysms 31 and its disruption prevents the development of aortic aneurysms 32 Doxycycline suppresses the growth of aortic aneurysms in animal models through its inhibition of MMP9 reduces aortic inflammation in humans 33 Pregnancy associated malaria Placental malaria edit A study on Ghanaian population showed that MMP 9 single nucleotide polymorphism 1562 C gt T rs3918242 was protective against placental malaria which suggests a possible role of MMP 9 in susceptibility to malaria 34 Dry eye edit Dry eye patients especially with meibomian gland dysfunction exhibit higher levels of MMP 9 35 References edit a b c GRCh38 Ensembl release 89 ENSG00000100985 Ensembl May 2017 a b c GRCm38 Ensembl release 89 ENSMUSG00000017737 Ensembl May 2017 Human PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Mouse PubMed Reference National Center for Biotechnology Information U S National Library of Medicine a b Matrix metallopeptidase 9 gelatinase B 92kDa gelatinase 92kDa type IV collagenase a b Nagase H Woessner JF July 1999 Matrix metalloproteinases The Journal of Biological Chemistry 274 31 21491 4 doi 10 1074 jbc 274 31 21491 PMID 10419448 Wang J Tsirka SE July 2005 Neuroprotection by inhibition of matrix metalloproteinases in a mouse model of intracerebral haemorrhage Brain 128 Pt 7 1622 33 doi 10 1093 brain awh489 PMID 15800021 Vandooren J Van den Steen PE Opdenakker G 2013 Biochemistry and molecular biology of gelatinase B or matrix metalloproteinase 9 MMP 9 the next decade Critical Reviews in Biochemistry and Molecular Biology 48 3 222 72 doi 10 3109 10409238 2013 770819 PMID 23547785 S2CID 33781725 Van den Steen PE Dubois B Nelissen I Rudd PM Dwek RA Opdenakker G December 2002 Biochemistry and molecular biology of gelatinase B or matrix metalloproteinase 9 MMP 9 Critical Reviews in Biochemistry and Molecular Biology 37 6 375 536 doi 10 1080 10409230290771546 PMID 12540195 S2CID 35833950 Hirose Y Chiba K Karasugi T Nakajima M Kawaguchi Y Mikami Y Furuichi T Mio F Miyake A Miyamoto T Ozaki K Takahashi A Mizuta H Kubo T Kimura T Tanaka T Toyama Y Ikegawa S May 2008 A functional polymorphism in THBS2 that affects alternative splicing and MMP binding is associated with lumbar disc herniation American Journal of Human Genetics 82 5 1122 9 doi 10 1016 j ajhg 2008 03 013 PMC 2427305 PMID 18455130 Delclaux C Delacourt C D Ortho MP Boyer V Lafuma C Harf A March 1996 Role of gelatinase B and elastase in human polymorphonuclear neutrophil migration across basement membrane American Journal of Respiratory Cell and Molecular Biology 14 3 288 95 doi 10 1165 ajrcmb 14 3 8845180 PMID 8845180 Opdenakker G Van den Steen PE Dubois B Nelissen I Van Coillie E Masure S Proost P Van Damme J June 2001 Gelatinase B functions as regulator and effector in leukocyte biology Journal of Leukocyte Biology 69 6 851 9 doi 10 1189 jlb 69 6 851 PMID 11404367 S2CID 15851048 Dubois B Starckx S Pagenstecher A Oord Jv Arnold B Opdenakker G August 2002 Gelatinase B deficiency protects against endotoxin shock European Journal of Immunology 32 8 2163 71 doi 10 1002 1521 4141 200208 32 8 lt 2163 AID IMMU2163 gt 3 0 CO 2 Q PMID 12209628 Forsyth PA Wong H Laing TD Rewcastle NB Morris DG Muzik H Leco KJ Johnston RN Brasher PM Sutherland G Edwards DR April 1999 Gelatinase A MMP 2 gelatinase B MMP 9 and membrane type matrix metalloproteinase 1 MT1 MMP are involved in different aspects of the pathophysiology of malignant gliomas British Journal of Cancer 79 11 12 1828 35 doi 10 1038 sj bjc 6690291 PMC 2362801 PMID 10206300 Vu TH Shipley JM Bergers G Berger JE Helms JA Hanahan D Shapiro SD Senior RM Werb Z May 1998 MMP 9 gelatinase B is a key regulator of growth plate angiogenesis and apoptosis of hypertrophic chondrocytes Cell 93 3 411 22 doi 10 1016 s0092 8674 00 81169 1 PMC 2839071 PMID 9590175 Heissig B Hattori K Dias S Friedrich M Ferris B Hackett NR Crystal RG Besmer P Lyden D Moore MA Werb Z Rafii S May 2002 Recruitment of stem and progenitor cells from the bone marrow niche requires MMP 9 mediated release of kit ligand Cell 109 5 625 37 doi 10 1016 s0092 8674 02 00754 7 PMC 2826110 PMID 12062105 Buisson AC Zahm JM Polette M Pierrot D Bellon G Puchelle E Birembaut P Tournier JM February 1996 Gelatinase B is involved in the in vitro wound repair of human respiratory epithelium Journal of Cellular Physiology 166 2 413 26 doi 10 1002 sici 1097 4652 199602 166 2 lt 413 aid jcp20 gt 3 0 co 2 a PMID 8592002 S2CID 24996115 Mohan R Chintala SK Jung JC Villar WV McCabe F Russo LA Lee Y McCarthy BE Wollenberg KR Jester JV Wang M Welgus HG Shipley JM Senior RM Fini ME January 2002 Matrix metalloproteinase gelatinase B MMP 9 coordinates and effects epithelial regeneration The Journal of Biological Chemistry 277 3 2065 72 doi 10 1074 jbc m107611200 PMID 11689563 Kobayashi T Kim H Liu X Sugiura H Kohyama T Fang Q Wen FQ Abe S Wang X Atkinson JJ Shipley JM Senior RM Rennard SI June 2014 Matrix metalloproteinase 9 activates TGF b and stimulates fibroblast contraction of collagen gels American Journal of Physiology Lung Cellular and Molecular Physiology 306 11 L1006 15 doi 10 1152 ajplung 00015 2014 PMC 4042193 PMID 24705725 a b Tranchant I Vera L Czarny B Amoura M Cassar E Beau F Stura EA Dive V March 2014 Halogen bonding controls selectivity of FRET substrate probes for MMP 9 Chemistry amp Biology 21 3 408 13 doi 10 1016 j chembiol 2014 01 008 PMID 24583051 Ramos DeSimone N Hahn Dantona E Sipley J Nagase H French DL Quigley JP May 1999 Activation of matrix metalloproteinase 9 MMP 9 via a converging plasmin stromelysin 1 cascade enhances tumor cell invasion The Journal of Biological Chemistry 274 19 13066 76 doi 10 1074 jbc 274 19 13066 PMID 10224058 Bode W Gomis Ruth FX Stockler W September 1993 Astacins serralysins snake venom and matrix metalloproteinases exhibit identical zinc binding environments HEXXHXXGXXH and Met turn and topologies and should be grouped into a common family the metzincins FEBS Letters 331 1 2 134 40 doi 10 1016 0014 5793 93 80312 I PMID 8405391 S2CID 27244239 Gomis Ruth FX Gohlke U Betz M Knauper V Murphy G Lopez Otin C Bode W December 1996 The helping hand of collagenase 3 MMP 13 2 7 A crystal structure of its C terminal haemopexin like domain Journal of Molecular Biology 264 3 556 66 doi 10 1006 jmbi 1996 0661 PMID 8969305 Gruber BL Sorbi D French DL Marchese MJ Nuovo GJ Kew RR Arbeit LA February 1996 Markedly elevated serum MMP 9 gelatinase B levels in rheumatoid arthritis a potentially useful laboratory marker Clinical Immunology and Immunopathology 78 2 161 71 doi 10 1006 clin 1996 0025 PMID 8625558 Clark AW Krekoski CA Bou SS Chapman KR Edwards DR November 1997 Increased gelatinase A MMP 2 and gelatinase B MMP 9 activities in human brain after focal ischemia Neuroscience Letters 238 1 2 53 6 doi 10 1016 s0304 3940 97 00859 8 PMID 9464653 S2CID 916260 Morini M Mottolese M Ferrari N Ghiorzo F Buglioni S Mortarini R Noonan DM Natali PG Albini A August 2000 The alpha 3 beta 1 integrin is associated with mammary carcinoma cell metastasis invasion and gelatinase B MMP 9 activity International Journal of Cancer 87 3 336 42 doi 10 1002 1097 0215 20000801 87 3 lt 336 aid ijc5 gt 3 3 co 2 v PMID 10897037 Farina AR Mackay AR January 2014 Gelatinase B MMP 9 in Tumour Pathogenesis and Progression Cancers 6 1 240 96 doi 10 3390 cancers6010240 PMC 3980597 PMID 24473089 Zucker S Lysik RM DiMassimo BI Zarrabi HM Moll UM Grimson R Tickle SP Docherty AJ August 1995 Plasma assay of gelatinase B tissue inhibitor of metalloproteinase complexes in cancer Cancer 76 4 700 8 doi 10 1002 1097 0142 19950815 76 4 lt 700 aid cncr2820760426 gt 3 0 co 2 5 PMID 8625169 S2CID 41700819 Groblewska M Siewko M Mroczko B Szmitkowski M April 2012 The role of matrix metalloproteinases MMPs and their inhibitors TIMPs in the development of esophageal cancer Folia Histochemica et Cytobiologica 50 1 12 9 doi 10 5603 fhc 2012 0002 PMID 22532131 Li M Yang G Xie B Babu K Huang C February 2014 Changes in matrix metalloproteinase 9 levels during progression of atrial fibrillation The Journal of International Medical Research 42 1 224 30 doi 10 1177 0300060513488514 PMID 24345823 Newman KM Ogata Y Malon AM Irizarry E Gandhi RH Nagase H Tilson MD August 1994 Identification of matrix metalloproteinases 3 stromelysin 1 and 9 gelatinase B in abdominal aortic aneurysm Arteriosclerosis and Thrombosis 14 8 1315 20 doi 10 1161 01 atv 14 8 1315 PMID 8049193 Pyo R Lee JK Shipley JM Curci JA Mao D Ziporin SJ Ennis TL Shapiro SD Senior RM Thompson RW June 2000 Targeted gene disruption of matrix metalloproteinase 9 gelatinase B suppresses development of experimental abdominal aortic aneurysms The Journal of Clinical Investigation 105 11 1641 9 doi 10 1172 jci8931 PMC 300851 PMID 10841523 Lindeman JH Abdul Hussien H van Bockel JH Wolterbeek R Kleemann R April 2009 Clinical trial of doxycycline for matrix metalloproteinase 9 inhibition in patients with an abdominal aneurysm doxycycline selectively depletes aortic wall neutrophils and cytotoxic T cells Circulation 119 16 2209 16 doi 10 1161 CIRCULATIONAHA 108 806505 PMID 19364980 Apoorv TS Babu PP Meese S Gai PP Bedu Addo G Mockenhaupt FP July 2015 Matrix metalloproteinase 9 polymorphism 1562 C gt T rs3918242 associated with protection against placental malaria The American Journal of Tropical Medicine and Hygiene 93 1 186 8 doi 10 4269 ajtmh 14 0816 PMC 4497894 PMID 26013370 Messmer Elisabeth M von Lindenfels Victoria Garbe Alexandra Kampik Anselm November 2016 Matrix Metalloproteinase 9 Testing in Dry Eye Disease Using a Commercially Available Point of Care Immunoassay Ophthalmology 123 11 2300 2308 doi 10 1016 j ophtha 2016 07 028 PMID 27665213 Further reading editNagase H Woessner JF July 1999 Matrix metalloproteinases The Journal of Biological Chemistry 274 31 21491 4 doi 10 1074 jbc 274 31 21491 PMID 10419448 Zhao X Wu T Chang CF Wu H Han X Li Q Gao Y Li Q Hou Z Maruyama T Zhang J Wang J May 2015 Toxic role of prostaglandin E2 receptor EP1 after intracerebral hemorrhage in mice Brain Behavior and Immunity 46 293 310 doi 10 1016 j bbi 2015 02 011 PMC 4422065 PMID 25697396 Starckx S Van den Steen PE Wuyts A Van Damme J Opdenakker G February 2002 Neutrophil gelatinase B and chemokines in leukocytosis and stem cell mobilization Leukemia amp Lymphoma 43 2 233 41 doi 10 1080 10428190290005982 PMID 11999552 S2CID 940921 Wu H Zhang Z Li Y Zhao R Li H Song Y Qi J Wang J October 2010 Time course of upregulation of inflammatory mediators in the hemorrhagic brain in rats correlation with brain edema Neurochemistry International 57 3 248 53 doi 10 1016 j neuint 2010 06 002 PMC 2910823 PMID 20541575 Bischof P Meisser A Campana A 2002 Control of MMP 9 expression at the maternal fetal interface Journal of Reproductive Immunology 55 1 2 3 10 doi 10 1016 S0165 0378 01 00142 5 PMID 12062817 St Pierre Y Van Themsche C Esteve PO September 2003 Emerging features in the regulation of MMP 9 gene expression for the development of novel molecular targets and therapeutic strategies Current Drug Targets Inflammation and Allergy 2 3 206 15 doi 10 2174 1568010033484133 PMID 14561155 S2CID 453825 Wu H Wu T Hua W Dong X Gao Y Zhao X Chen W Cao W Yang Q Qi J Zhou J Wang J March 2015 PGE2 receptor agonist misoprostol protects brain against intracerebral hemorrhage in mice Neurobiology of Aging 36 3 1439 50 doi 10 1016 j neurobiolaging 2014 12 029 PMC 4417504 PMID 25623334 Lee JM Yin K Hsin I Chen S Fryer JD Holtzman DM Hsu CY Xu J March 2005 Matrix metalloproteinase 9 in cerebral amyloid angiopathy related hemorrhage Journal of the Neurological Sciences 229 230 249 54 doi 10 1016 j jns 2004 11 041 PMID 15760647 S2CID 21791281 Nair RR Boyd DD November 2005 Expression cloning of novel regulators of 92 kDa type IV collagenase expression Biochemical Society Transactions 33 Pt 5 1135 6 doi 10 1042 BST20051135 PMID 16246065 Wu H Zhang Z Hu X Zhao R Song Y Ban X Qi J Wang J June 2010 Dynamic changes of inflammatory markers in brain after hemorrhagic stroke in humans a postmortem study Brain Research 1342 111 7 doi 10 1016 j brainres 2010 04 033 PMC 2885522 PMID 20420814 Wu H Wu T Han X Wan J Jiang C Chen W Lu H Yang Q Wang J January 2017 Cerebroprotection by the neuronal PGE2 receptor EP2 after intracerebral hemorrhage in middle aged mice Journal of Cerebral Blood Flow and Metabolism 37 1 39 51 doi 10 1177 0271678X15625351 PMC 5363749 PMID 26746866 Ram M Sherer Y Shoenfeld Y July 2006 Matrix metalloproteinase 9 and autoimmune diseases Journal of Clinical Immunology 26 4 299 307 doi 10 1007 s10875 006 9022 6 PMID 16652230 S2CID 19619963 External links editThe MEROPS online database for peptidases and their inhibitors M10 009 Overview of all the structural information available in the PDB for UniProt P14780 Matrix metalloproteinase 9 at the PDBe KB Portal nbsp Biology Retrieved from https en wikipedia org w index php title MMP9 amp oldid 1193758177, wikipedia, wiki, book, books, library,

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