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Wikipedia

TRAPPC3

January 01, 1970

Trafficking protein particle complex subunit 3 is a protein that in humans is encoded by the TRAPPC3 gene.[5][6]

TRAPPC3
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesTRAPPC3, BET3, trafficking protein particle complex 3, trafficking protein particle complex subunit 3
External IDsOMIM: 610955 MGI: 1351486 HomoloGene: 6399 GeneCards: TRAPPC3
Orthologs
SpeciesHumanMouse
Entrez

27095

27096

Ensembl

ENSG00000054116

ENSMUSG00000028847

UniProt

O43617

O55013

RefSeq (mRNA)

NM_001270894
NM_001270895
NM_001270896
NM_001270897
NM_014408

NM_013718

RefSeq (protein)

NP_001257823
NP_001257824
NP_001257825
NP_001257826
NP_055223

NP_038746

Location (UCSC)Chr 1: 36.14 – 36.16 MbChr 4: 126.16 – 126.17 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

References edit

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000054116 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000028847 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA (Jun 1996). "A "double adaptor" method for improved shotgun library construction". Anal Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
  6. ^ "Entrez Gene: TRAPPC3 trafficking protein particle complex 3".

Further reading edit

  • Yu W, Andersson B, Worley KC, et al. (1997). "Large-Scale Concatenation cDNA Sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
  • Sacher M, Jiang Y, Barrowman J, et al. (1998). "TRAPP, a highly conserved novel complex on the cis-Golgi that mediates vesicle docking and fusion". EMBO J. 17 (9): 2494–503. doi:10.1093/emboj/17.9.2494. PMC 1170591. PMID 9564032.
  • Barrowman J, Sacher M, Ferro-Novick S (2000). "TRAPP stably associates with the Golgi and is required for vesicle docking". EMBO J. 19 (5): 862–9. doi:10.1093/emboj/19.5.862. PMC 305626. PMID 10698928.
  • Gavin AC, Bösche M, Krause R, et al. (2002). "Functional organization of the yeast proteome by systematic analysis of protein complexes". Nature. 415 (6868): 141–7. Bibcode:2002Natur.415..141G. doi:10.1038/415141a. PMID 11805826. S2CID 4425555.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Kim YG, Sohn EJ, Seo J, et al. (2005). "Crystal structure of bet3 reveals a novel mechanism for Golgi localization of tethering factor TRAPP". Nat. Struct. Mol. Biol. 12 (1): 38–45. doi:10.1038/nsmb871. PMID 15608655. S2CID 22597154.
  • Turnbull AP, Kümmel D, Prinz B, et al. (2005). "Structure of palmitoylated BET3: insights into TRAPP complex assembly and membrane localization". EMBO J. 24 (5): 875–84. doi:10.1038/sj.emboj.7600565. PMC 554119. PMID 15692564.
  • Loh E, Peter F, Subramaniam VN, Hong W (2005). "Mammalian Bet3 functions as a cytosolic factor participating in transport from the ER to the Golgi apparatus" (PDF). J. Cell Sci. 118 (Pt 6): 1209–22. doi:10.1242/jcs.01723. PMID 15728249. S2CID 3092909.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Kim MS, Yi MJ, Lee KH, et al. (2006). "Biochemical and crystallographic studies reveal a specific interaction between TRAPP subunits Trs33p and Bet3p". Traffic. 6 (12): 1183–95. doi:10.1111/j.1600-0854.2005.00352.x. PMID 16262728. S2CID 24273412.
  • Kümmel D, Müller JJ, Roske Y, et al. (2006). "Structure of the Bet3-Tpc6B core of TRAPP: two Tpc6 paralogs form trimeric complexes with Bet3 and Mum2". J. Mol. Biol. 361 (1): 22–32. doi:10.1016/j.jmb.2006.06.012. PMID 16828797.
  • Yu S, Satoh A, Pypaert M, et al. (2006). "mBet3p is required for homotypic COPII vesicle tethering in mammalian cells". J. Cell Biol. 174 (3): 359–68. doi:10.1083/jcb.200603044. PMC 2064232. PMID 16880271.
  • Kümmel D, Heinemann U, Veit M (2006). "Unique self-palmitoylation activity of the transport protein particle component Bet3: A mechanism required for protein stability". Proc. Natl. Acad. Sci. U.S.A. 103 (34): 12701–6. Bibcode:2006PNAS..10312701K. doi:10.1073/pnas.0603513103. PMC 1562543. PMID 16908848.
 

This article on a gene on human chromosome 1 is a stub. You can help Wikipedia by expanding it.

January 01, 1970
trappc3, trafficking, protein, particle, complex, subunit, protein, that, humans, encoded, gene, available, structurespdbortholog, search, pdbe, rcsblist, codes1sz7, 2c0j, 2cfh, 3kxcidentifiersaliases, bet3, trafficking, protein, particle, complex, trafficking. Trafficking protein particle complex subunit 3 is a protein that in humans is encoded by the TRAPPC3 gene 5 6 TRAPPC3Available structuresPDBOrtholog search PDBe RCSBList of PDB id codes1SZ7 2C0J 2CFH 3KXCIdentifiersAliasesTRAPPC3 BET3 trafficking protein particle complex 3 trafficking protein particle complex subunit 3External IDsOMIM 610955 MGI 1351486 HomoloGene 6399 GeneCards TRAPPC3Gene location Human Chr Chromosome 1 human 1 Band1p34 3Start36 136 570 bp 1 End36 156 053 bp 1 Gene location Mouse Chr Chromosome 4 mouse 2 Band4 4 D2 2Start126 156 118 bp 2 End126 169 676 bp 2 RNA expression patternBgeeHumanMouse ortholog Top expressed inright adrenal glandleft adrenal glandright lobe of thyroid glandislet of Langerhansleft lobe of thyroid glandright coronary arteryanterior pituitarythoracic aortaascending aortamonocyteTop expressed incalvariamedial ganglionic eminencecerebellar cortexchoroid plexuslipyolk saccerebellar vermissuperior frontal gyrussecondary oocytevas deferensMore reference expression dataBioGPSMore reference expression dataGene ontologyMolecular functionprotein bindingCellular componentGolgi apparatus endoplasmic reticulum Golgi membrane cytosol TRAPP complex cis Golgi network membraneBiological processCOPII vesicle coating vesicle mediated transport Golgi vesicle transport endoplasmic reticulum to Golgi vesicle mediated transport intra Golgi vesicle mediated transportSources Amigo QuickGOOrthologsSpeciesHumanMouseEntrez2709527096EnsemblENSG00000054116ENSMUSG00000028847UniProtO43617O55013RefSeq mRNA NM 001270894NM 001270895NM 001270896NM 001270897NM 014408NM 013718RefSeq protein NP 001257823NP 001257824NP 001257825NP 001257826NP 055223NP 038746Location UCSC Chr 1 36 14 36 16 MbChr 4 126 16 126 17 MbPubMed search 3 4 WikidataView Edit HumanView Edit MouseReferences edit a b c GRCh38 Ensembl release 89 ENSG00000054116 Ensembl May 2017 a b c GRCm38 Ensembl release 89 ENSMUSG00000028847 Ensembl May 2017 Human PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Mouse PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Andersson B Wentland MA Ricafrente JY Liu W Gibbs RA Jun 1996 A double adaptor method for improved shotgun library construction Anal Biochem 236 1 107 13 doi 10 1006 abio 1996 0138 PMID 8619474 Entrez Gene TRAPPC3 trafficking protein particle complex 3 Further reading editYu W Andersson B Worley KC et al 1997 Large Scale Concatenation cDNA Sequencing Genome Res 7 4 353 8 doi 10 1101 gr 7 4 353 PMC 139146 PMID 9110174 Sacher M Jiang Y Barrowman J et al 1998 TRAPP a highly conserved novel complex on the cis Golgi that mediates vesicle docking and fusion EMBO J 17 9 2494 503 doi 10 1093 emboj 17 9 2494 PMC 1170591 PMID 9564032 Barrowman J Sacher M Ferro Novick S 2000 TRAPP stably associates with the Golgi and is required for vesicle docking EMBO J 19 5 862 9 doi 10 1093 emboj 19 5 862 PMC 305626 PMID 10698928 Gavin AC Bosche M Krause R et al 2002 Functional organization of the yeast proteome by systematic analysis of protein complexes Nature 415 6868 141 7 Bibcode 2002Natur 415 141G doi 10 1038 415141a PMID 11805826 S2CID 4425555 Strausberg RL Feingold EA Grouse LH et al 2003 Generation and initial analysis of more than 15 000 full length human and mouse cDNA sequences Proc Natl Acad Sci U S A 99 26 16899 903 Bibcode 2002PNAS 9916899M doi 10 1073 pnas 242603899 PMC 139241 PMID 12477932 Ota T Suzuki Y Nishikawa T et al 2004 Complete sequencing and characterization of 21 243 full length human cDNAs Nat Genet 36 1 40 5 doi 10 1038 ng1285 PMID 14702039 Gerhard DS Wagner L Feingold EA et al 2004 The Status Quality and Expansion of the NIH Full Length cDNA Project The Mammalian Gene Collection MGC Genome Res 14 10B 2121 7 doi 10 1101 gr 2596504 PMC 528928 PMID 15489334 Kim YG Sohn EJ Seo J et al 2005 Crystal structure of bet3 reveals a novel mechanism for Golgi localization of tethering factor TRAPP Nat Struct Mol Biol 12 1 38 45 doi 10 1038 nsmb871 PMID 15608655 S2CID 22597154 Turnbull AP Kummel D Prinz B et al 2005 Structure of palmitoylated BET3 insights into TRAPP complex assembly and membrane localization EMBO J 24 5 875 84 doi 10 1038 sj emboj 7600565 PMC 554119 PMID 15692564 Loh E Peter F Subramaniam VN Hong W 2005 Mammalian Bet3 functions as a cytosolic factor participating in transport from the ER to the Golgi apparatus PDF J Cell Sci 118 Pt 6 1209 22 doi 10 1242 jcs 01723 PMID 15728249 S2CID 3092909 Rual JF Venkatesan K Hao T et al 2005 Towards a proteome scale map of the human protein protein interaction network Nature 437 7062 1173 8 Bibcode 2005Natur 437 1173R doi 10 1038 nature04209 PMID 16189514 S2CID 4427026 Kim MS Yi MJ Lee KH et al 2006 Biochemical and crystallographic studies reveal a specific interaction between TRAPP subunits Trs33p and Bet3p Traffic 6 12 1183 95 doi 10 1111 j 1600 0854 2005 00352 x PMID 16262728 S2CID 24273412 Kummel D Muller JJ Roske Y et al 2006 Structure of the Bet3 Tpc6B core of TRAPP two Tpc6 paralogs form trimeric complexes with Bet3 and Mum2 J Mol Biol 361 1 22 32 doi 10 1016 j jmb 2006 06 012 PMID 16828797 Yu S Satoh A Pypaert M et al 2006 mBet3p is required for homotypic COPII vesicle tethering in mammalian cells J Cell Biol 174 3 359 68 doi 10 1083 jcb 200603044 PMC 2064232 PMID 16880271 Kummel D Heinemann U Veit M 2006 Unique self palmitoylation activity of the transport protein particle component Bet3 A mechanism required for protein stability Proc Natl Acad Sci U S A 103 34 12701 6 Bibcode 2006PNAS 10312701K doi 10 1073 pnas 0603513103 PMC 1562543 PMID 16908848 nbsp This article on a gene on human chromosome 1 is a stub You can help Wikipedia by expanding it vte Retrieved from https en wikipedia org w index php title TRAPPC3 amp oldid 1193553264, wikipedia, wiki, book, books, library,

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