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Wikipedia

Syndecan-3

Syndecan-3 is a protein that in humans is encoded by the SDC3 gene.[5][6][7]

SDC3
Identifiers
AliasesSDC3, SDCN, SYND3, syndecan 3
External IDsOMIM: 186357 MGI: 1349163 HomoloGene: 7965 GeneCards: SDC3
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_014654

NM_011520

RefSeq (protein)

NP_055469

NP_035650

Location (UCSC)Chr 1: 30.87 – 30.91 MbChr 4: 130.52 – 130.55 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

References edit

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000162512 - Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000025743 - Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Carey DJ, Evans DM, Stahl RC, Asundi VK, Conner KJ, Garbes P, Cizmeci-Smith G (May 1992). "Molecular cloning and characterization of N-syndecan, a novel transmembrane heparan sulfate proteoglycan". J Cell Biol. 117 (1): 191–201. doi:10.1083/jcb.117.1.191. PMC 2289399. PMID 1556152.
  6. ^ Berndt C, Casaroli-Marano RP, Vilaro S, Reina M (Aug 2001). "Cloning and characterization of human syndecan-3". J Cell Biochem. 82 (2): 246–59. doi:10.1002/jcb.1119. PMID 11527150. S2CID 1870905.
  7. ^ "Entrez Gene: SDC3 syndecan 3".

Further reading edit

  • Barillari G, Gendelman R, Gallo RC, Ensoli B (1993). "The Tat protein of human immunodeficiency virus type 1, a growth factor for AIDS Kaposi sarcoma and cytokine-activated vascular cells, induces adhesion of the same cell types by using integrin receptors recognizing the RGD amino acid sequence". Proc. Natl. Acad. Sci. U.S.A. 90 (17): 7941–5. Bibcode:1993PNAS...90.7941B. doi:10.1073/pnas.90.17.7941. PMC 47263. PMID 7690138.
  • Raulo E, Chernousov MA, Carey DJ, et al. (1994). "Isolation of a neuronal cell surface receptor of heparin binding growth-associated molecule (HB-GAM). Identification as N-syndecan (syndecan-3)". J. Biol. Chem. 269 (17): 12999–3004. doi:10.1016/S0021-9258(18)99975-8. PMID 8175719.
  • Chernousov MA, Carey DJ (1993). "N-syndecan (syndecan 3) from neonatal rat brain binds basic fibroblast growth factor". J. Biol. Chem. 268 (22): 16810–4. doi:10.1016/S0021-9258(19)85488-1. PMID 8344959.
  • Albini A, Benelli R, Presta M, et al. (1996). "HIV-tat protein is a heparin-binding angiogenic growth factor". Oncogene. 12 (2): 289–97. PMID 8570206.
  • Chernousov MA, Stahl RC, Carey DJ (1996). "Schwann cells secrete a novel collagen-like adhesive protein that binds N-syndecan". J. Biol. Chem. 271 (23): 13844–53. doi:10.1074/jbc.271.23.13844. PMID 8662884.
  • Nakanishi T, Kadomatsu K, Okamoto T, et al. (1997). "Expression of syndecan-1 and -3 during embryogenesis of the central nervous system in relation to binding with midkine". J. Biochem. 121 (2): 197–205. PMID 9089390.
  • Rusnati M, Coltrini D, Oreste P, et al. (1997). "Interaction of HIV-1 Tat protein with heparin. Role of the backbone structure, sulfation, and size". J. Biol. Chem. 272 (17): 11313–20. doi:10.1074/jbc.272.17.11313. PMID 9111037.
  • Chang HC, Samaniego F, Nair BC, et al. (1997). "HIV-1 Tat protein exits from cells via a leaderless secretory pathway and binds to extracellular matrix-associated heparan sulfate proteoglycans through its basic region". AIDS. 11 (12): 1421–31. doi:10.1097/00002030-199712000-00006. PMID 9342064. S2CID 7648619.
  • Asundi VK, Carey DJ (1997). "Phosphorylation of recombinant N-syndecan (syndecan 3) core protein". Biochem. Biophys. Res. Commun. 240 (2): 502–6. doi:10.1006/bbrc.1997.7684. PMID 9388509.
  • Seki N, Ohira M, Nagase T, et al. (1998). "Characterization of cDNA clones in size-fractionated cDNA libraries from human brain". DNA Res. 4 (5): 345–9. doi:10.1093/dnares/4.5.345. PMID 9455484.
  • Kinnunen T, Kaksonen M, Saarinen J, et al. (1998). "Cortactin-Src kinase signaling pathway is involved in N-syndecan-dependent neurite outgrowth". J. Biol. Chem. 273 (17): 10702–8. doi:10.1074/jbc.273.17.10702. PMID 9553134.
  • Hsueh YP, Sheng M (1999). "Regulated expression and subcellular localization of syndecan heparan sulfate proteoglycans and the syndecan-binding protein CASK/LIN-2 during rat brain development". J. Neurosci. 19 (17): 7415–25. doi:10.1523/JNEUROSCI.19-17-07415.1999. PMC 6782500. PMID 10460248.
  • Rusnati M, Tulipano G, Spillmann D, et al. (1999). "Multiple interactions of HIV-I Tat protein with size-defined heparin oligosaccharides". J. Biol. Chem. 274 (40): 28198–205. doi:10.1074/jbc.274.40.28198. PMID 10497173.
  • Tyagi M, Rusnati M, Presta M, Giacca M (2001). "Internalization of HIV-1 tat requires cell surface heparan sulfate proteoglycans". J. Biol. Chem. 276 (5): 3254–61. doi:10.1074/jbc.M006701200. PMID 11024024.
  • Koroll M, Rathjen FG, Volkmer H (2001). "The neural cell recognition molecule neurofascin interacts with syntenin-1 but not with syntenin-2, both of which reveal self-associating activity". J. Biol. Chem. 276 (14): 10646–54. doi:10.1074/jbc.M010647200. PMID 11152476.
  • Hakansson S, Jacobs A, Caffrey M (2001). "Heparin binding by the HIV-1 tat protein transduction domain". Protein Sci. 10 (10): 2138–9. doi:10.1110/ps.23401. PMC 2374215. PMID 11567105.
  • Erdman R, Stahl RC, Rothblum K, et al. (2002). "Schwann cell adhesion to a novel heparan sulfate binding site in the N-terminal domain of alpha 4 type V collagen is mediated by syndecan-3". J. Biol. Chem. 277 (9): 7619–25. doi:10.1074/jbc.M111311200. PMID 11751872.
  • Alvarez K, Fadic R, Brandan E (2002). "Augmented synthesis and differential localization of heparan sulfate proteoglycans in Duchenne muscular dystrophy". J. Cell. Biochem. 85 (4): 703–13. doi:10.1002/jcb.10184. hdl:10533/173369. PMID 11968010. S2CID 20243469.

syndecan, protein, that, humans, encoded, sdc3, gene, sdc3identifiersaliasessdc3, sdcn, synd3, syndecan, 3external, idsomim, 186357, 1349163, homologene, 7965, genecards, sdc3gene, location, human, chromosome, human, band1p35, 2start30, end30, gene, location, . Syndecan 3 is a protein that in humans is encoded by the SDC3 gene 5 6 7 SDC3IdentifiersAliasesSDC3 SDCN SYND3 syndecan 3External IDsOMIM 186357 MGI 1349163 HomoloGene 7965 GeneCards SDC3Gene location Human Chr Chromosome 1 human 1 Band1p35 2Start30 869 466 bp 1 End30 908 758 bp 1 Gene location Mouse Chr Chromosome 4 mouse 2 Band4 D2 2 4 63 63 cMStart130 519 848 bp 2 End130 553 630 bp 2 RNA expression patternBgeeHumanMouse ortholog Top expressed innucleus accumbensamygdalacaudate nucleushypothalamusputamenleft uterine tubeganglionic eminenceprefrontal cortexexternal globus pallidusventral tegmental areaTop expressed incalvariaadrenal glandmolarbody of femurvisual cortexolfactory epitheliumsciatic nervecerebellar cortexpontine nucleisuperior frontal gyrusMore reference expression dataBioGPSMore reference expression dataGene ontologyMolecular functionprotein binding identical protein bindingCellular componentintegral component of membrane membrane plasma membrane lysosomal lumen Golgi lumen cell surface extracellular matrix collagen containing extracellular matrix microspikeBiological processglycosaminoglycan metabolic process retinoid metabolic process glycosaminoglycan catabolic process glycosaminoglycan biosynthetic process leukocyte migration cell migrationSources Amigo QuickGOOrthologsSpeciesHumanMouseEntrez967220970EnsemblENSG00000162512ENSMUSG00000025743UniProtO75056Q64519RefSeq mRNA NM 014654NM 011520RefSeq protein NP 055469NP 035650Location UCSC Chr 1 30 87 30 91 MbChr 4 130 52 130 55 MbPubMed search 3 4 WikidataView Edit HumanView Edit MouseReferences edit a b c GRCh38 Ensembl release 89 ENSG00000162512 Ensembl May 2017 a b c GRCm38 Ensembl release 89 ENSMUSG00000025743 Ensembl May 2017 Human PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Mouse PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Carey DJ Evans DM Stahl RC Asundi VK Conner KJ Garbes P Cizmeci Smith G May 1992 Molecular cloning and characterization of N syndecan a novel transmembrane heparan sulfate proteoglycan J Cell Biol 117 1 191 201 doi 10 1083 jcb 117 1 191 PMC 2289399 PMID 1556152 Berndt C Casaroli Marano RP Vilaro S Reina M Aug 2001 Cloning and characterization of human syndecan 3 J Cell Biochem 82 2 246 59 doi 10 1002 jcb 1119 PMID 11527150 S2CID 1870905 Entrez Gene SDC3 syndecan 3 Further reading editBarillari G Gendelman R Gallo RC Ensoli B 1993 The Tat protein of human immunodeficiency virus type 1 a growth factor for AIDS Kaposi sarcoma and cytokine activated vascular cells induces adhesion of the same cell types by using integrin receptors recognizing the RGD amino acid sequence Proc Natl Acad Sci U S A 90 17 7941 5 Bibcode 1993PNAS 90 7941B doi 10 1073 pnas 90 17 7941 PMC 47263 PMID 7690138 Raulo E Chernousov MA Carey DJ et al 1994 Isolation of a neuronal cell surface receptor of heparin binding growth associated molecule HB GAM Identification as N syndecan syndecan 3 J Biol Chem 269 17 12999 3004 doi 10 1016 S0021 9258 18 99975 8 PMID 8175719 Chernousov MA Carey DJ 1993 N syndecan syndecan 3 from neonatal rat brain binds basic fibroblast growth factor J Biol Chem 268 22 16810 4 doi 10 1016 S0021 9258 19 85488 1 PMID 8344959 Albini A Benelli R Presta M et al 1996 HIV tat protein is a heparin binding angiogenic growth factor Oncogene 12 2 289 97 PMID 8570206 Chernousov MA Stahl RC Carey DJ 1996 Schwann cells secrete a novel collagen like adhesive protein that binds N syndecan J Biol Chem 271 23 13844 53 doi 10 1074 jbc 271 23 13844 PMID 8662884 Nakanishi T Kadomatsu K Okamoto T et al 1997 Expression of syndecan 1 and 3 during embryogenesis of the central nervous system in relation to binding with midkine J Biochem 121 2 197 205 PMID 9089390 Rusnati M Coltrini D Oreste P et al 1997 Interaction of HIV 1 Tat protein with heparin Role of the backbone structure sulfation and size J Biol Chem 272 17 11313 20 doi 10 1074 jbc 272 17 11313 PMID 9111037 Chang HC Samaniego F Nair BC et al 1997 HIV 1 Tat protein exits from cells via a leaderless secretory pathway and binds to extracellular matrix associated heparan sulfate proteoglycans through its basic region AIDS 11 12 1421 31 doi 10 1097 00002030 199712000 00006 PMID 9342064 S2CID 7648619 Asundi VK Carey DJ 1997 Phosphorylation of recombinant N syndecan syndecan 3 core protein Biochem Biophys Res Commun 240 2 502 6 doi 10 1006 bbrc 1997 7684 PMID 9388509 Seki N Ohira M Nagase T et al 1998 Characterization of cDNA clones in size fractionated cDNA libraries from human brain DNA Res 4 5 345 9 doi 10 1093 dnares 4 5 345 PMID 9455484 Kinnunen T Kaksonen M Saarinen J et al 1998 Cortactin Src kinase signaling pathway is involved in N syndecan dependent neurite outgrowth J Biol Chem 273 17 10702 8 doi 10 1074 jbc 273 17 10702 PMID 9553134 Hsueh YP Sheng M 1999 Regulated expression and subcellular localization of syndecan heparan sulfate proteoglycans and the syndecan binding protein CASK LIN 2 during rat brain development J Neurosci 19 17 7415 25 doi 10 1523 JNEUROSCI 19 17 07415 1999 PMC 6782500 PMID 10460248 Rusnati M Tulipano G Spillmann D et al 1999 Multiple interactions of HIV I Tat protein with size defined heparin oligosaccharides J Biol Chem 274 40 28198 205 doi 10 1074 jbc 274 40 28198 PMID 10497173 Tyagi M Rusnati M Presta M Giacca M 2001 Internalization of HIV 1 tat requires cell surface heparan sulfate proteoglycans J Biol Chem 276 5 3254 61 doi 10 1074 jbc M006701200 PMID 11024024 Koroll M Rathjen FG Volkmer H 2001 The neural cell recognition molecule neurofascin interacts with syntenin 1 but not with syntenin 2 both of which reveal self associating activity J Biol Chem 276 14 10646 54 doi 10 1074 jbc M010647200 PMID 11152476 Hakansson S Jacobs A Caffrey M 2001 Heparin binding by the HIV 1 tat protein transduction domain Protein Sci 10 10 2138 9 doi 10 1110 ps 23401 PMC 2374215 PMID 11567105 Erdman R Stahl RC Rothblum K et al 2002 Schwann cell adhesion to a novel heparan sulfate binding site in the N terminal domain of alpha 4 type V collagen is mediated by syndecan 3 J Biol Chem 277 9 7619 25 doi 10 1074 jbc M111311200 PMID 11751872 Alvarez K Fadic R Brandan E 2002 Augmented synthesis and differential localization of heparan sulfate proteoglycans in Duchenne muscular dystrophy J Cell Biochem 85 4 703 13 doi 10 1002 jcb 10184 hdl 10533 173369 PMID 11968010 S2CID 20243469 nbsp This article on a gene on human chromosome 1 is a stub You can help Wikipedia by expanding it vte Retrieved from https en wikipedia org w index php title Syndecan 3 amp oldid 1191500504, wikipedia, wiki, book, books, library,

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