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Reed–Frost model

The Reed–Frost model is a mathematical model of epidemics put forth in the 1920s by Lowell Reed and Wade Hampton Frost, of Johns Hopkins University.[1][2] While originally presented in a talk by Frost in 1928 and used in courses at Hopkins for two decades, the mathematical formulation was not published until the 1950s, when it was also made into a TV episode.[3]

History edit

During the 1920s, mathematician Lowell Reed and physician Wade Hampton Frost developed a binomial chain model for disease propagation, used in their biostatistics and epidemiology classes at Johns Hopkins University. Despite not having published their results, several other academics have done them in their studies.[4] It was not until 1950 that mathematical formulation was published and turned into a television program entitled Epidemic theory: What is it?.[3]

In the program, Lowell Reed, after explaining the formal definition of the model, demonstrates its application through an experimentation with marbles of different colors.[3]

The model is an extension of what was proposed by H.E. Soper in 1929 for measles. Soper's model was deterministic, in which all members of the population were equally susceptible to disease and had the ability to transmit disease. The model is also based on the law of mass action, so that an infection rate at a given time was proportional to the number of susceptible and infectious ones at that time. It is effective for moderately large populations, but it does not take into account multiple infectives that come into contact with the same individual. Therefore, in small populations the model greatly overestimates the number of susceptibles that become infected.[5][6][7]

Reed and Frost modified the Soper model to account for the fact that only one new case would be produced if a particular susceptible includes contact with two or more cases.[8] The Reed-Frost model has been widely used and served as the basis for the development of more detailed disease propagation simulation studies.[9][10][11]

Description edit

This is an example of a "chain binomial" model, a simplified, iterative model of how an epidemic will behave over time.

The Reed–Frost model is one of the simplest stochastic epidemic models. It was formulated by Lowell Reed and Wade Frost in 1928 (in unpublished work) and describes the evolution of an infection in generations. Each infected individual in generation t (t = 1,2,...) independently infects each susceptible individual in the population with some probability p. The individuals that become infected by the individuals in generation t then constitute generation t + 1 and the individuals in generation t are removed from the epidemic process.[12]

The Reed–Frost model is based on the following assumptions:[13]

  1. The infection is spread directly from infected individuals to others by a certain type of contact (termed "adequate contact") and in no other way.
  2. Any non-immune individual in the group, after such contact with an infectious individual in a given period, will develop the infection and will be infectious to others only within the following time period; in subsequent time periods, he is wholly and permanently immune.
  3. Each individual has a fixed probability of coming into adequate contact with any other specified individual in the group within one time interval, and this probability is the same for every member of the group.
  4. The individuals are wholly segregated from others outside the group. (It is a closed population.)
  5. These conditions remain constant during the epidemic.

The following parameters are set initially:

  • Size of the population
  • Number of individuals already immune
  • Number of cases (usually set at 1)
  • Probability of adequate contact

With this information, a simple formula allows the calculation of how many individuals will be infected, and how many immune, in the next time interval. This is repeated until the entire population is immune, or no infective individuals remain. The model can then be run repeatedly, adjusting the initial conditions, to see how these affect the progression of the epidemic.

The probability of adequate contact corresponds roughly with R0, the basic reproduction number – in a large population when the initial number of infecteds is small, an infected individual is expected to cause   new cases.

Mathematics edit

Let   represent the number of cases of infection at time  . Assume all cases recover or are removed in exactly one time-step. Let   represent the number of susceptible individuals at time  . Let   be a Bernoulli random variable that returns   with probability   and   with probability  . Making use of the random-variable multiplication convention, we can write the Reed–Frost model as

 

with initial number of susceptible and infected individuals   given. Here,   is the probability that a person comes in contact with another person in one time-step and that that contact results in disease transmission.

The deterministic limit is (found by replacing the random variables with their expectations),

 

See also edit

References edit

  1. ^ Schwabe CW, Riemann HP, Franti CE. (1977). Epidemiology in Veterinary Practice. Lea & Febiger. pp. 258–260
  2. ^ Abbey, Helen (1952). "An examination of the Reed-Frost theory of epidemics". Hum. Biol. 3:201
  3. ^ a b c Reed, Lowell (1951) Epidemic Theory: What Is It? (Television program) Youtube, retrieved 21 March 2021. Johns Hopkins Science Review, Baltimore, MD
  4. ^ Jacquez, John A. (1987). "A note on chain-binomial models of epidemic spread: What is wrong with the Reed-Frost formulation?". Mathematical Biosciences. 87: 73–82. doi:10.1016/0025-5564(87)90034-4. hdl:2027.42/26512. ISSN 0025-5564 – via Elsevier Science Publishing Co.
  5. ^ Varty, Zak (2016). "Computer Intensive Methods for Modelling Household Epidemics". Lancaster University: 6–11. JSTOR 1427536. {{cite journal}}: Cite journal requires |journal= (help)
  6. ^ Abbey, H. (1952). "An examination of the Reed-Frost theory of epidemics". Human Biology. 24 (3): 201–233. ISSN 0018-7143. PMID 12990130.
  7. ^ Soper, H. E. (1929). "The Interpretation of Periodicity in Disease Prevalence". Journal of the Royal Statistical Society. 92 (1): 34–73. doi:10.2307/2341437. ISSN 0952-8385. JSTOR 2341437.
  8. ^ Dietz, Klaus (3 May 2009). "Epidemics: the fitting of the first dynamic models to data". Journal of Contemporary Mathematical Analysis. 44 (2): 97. doi:10.3103/S1068362309020034. ISSN 1934-9416. S2CID 162120980.
  9. ^ "Lowell Reed | Johns Hopkins Bloomberg School of Public Health". publichealth.jhu.edu. Retrieved 29 October 2021.
  10. ^ Engelmann, Lukas (30 August 2021). "A box, a trough and marbles: How the Reed-Frost epidemic theory shaped epidemiological reasoning in the 20th century". History and Philosophy of the Life Sciences. 43 (3): 105. doi:10.1007/s40656-021-00445-z. ISSN 1742-6316. PMC 8404547. PMID 34462807.
  11. ^ Picard, Philippe; Lefevre, Claude (1990). "A Unified Analysis of the Final Size and Severity Distribution in Collective Reed-Frost Epidemic Processes". Advances in Applied Probability. 22 (2): 269–294. doi:10.2307/1427536. ISSN 0001-8678. JSTOR 1427536.
  12. ^ Deijfen, Maria (2011). "Epidemics and vaccination on weighted graphs". Mathematical Biosciences. 232 (1): 57–65. arXiv:1101.4154. doi:10.1016/j.mbs.2011.04.003. PMID 21536052. S2CID 1744357.
  13. ^ "Reed–Frost Epidemic Model". Ohio Supercomputer Center. 29 May 2012.

reed, frost, model, mathematical, model, epidemics, forth, 1920s, lowell, reed, wade, hampton, frost, johns, hopkins, university, while, originally, presented, talk, frost, 1928, used, courses, hopkins, decades, mathematical, formulation, published, until, 195. The Reed Frost model is a mathematical model of epidemics put forth in the 1920s by Lowell Reed and Wade Hampton Frost of Johns Hopkins University 1 2 While originally presented in a talk by Frost in 1928 and used in courses at Hopkins for two decades the mathematical formulation was not published until the 1950s when it was also made into a TV episode 3 Contents 1 History 2 Description 2 1 Mathematics 3 See also 4 ReferencesHistory editDuring the 1920s mathematician Lowell Reed and physician Wade Hampton Frost developed a binomial chain model for disease propagation used in their biostatistics and epidemiology classes at Johns Hopkins University Despite not having published their results several other academics have done them in their studies 4 It was not until 1950 that mathematical formulation was published and turned into a television program entitled Epidemic theory What is it 3 In the program Lowell Reed after explaining the formal definition of the model demonstrates its application through an experimentation with marbles of different colors 3 The model is an extension of what was proposed by H E Soper in 1929 for measles Soper s model was deterministic in which all members of the population were equally susceptible to disease and had the ability to transmit disease The model is also based on the law of mass action so that an infection rate at a given time was proportional to the number of susceptible and infectious ones at that time It is effective for moderately large populations but it does not take into account multiple infectives that come into contact with the same individual Therefore in small populations the model greatly overestimates the number of susceptibles that become infected 5 6 7 Reed and Frost modified the Soper model to account for the fact that only one new case would be produced if a particular susceptible includes contact with two or more cases 8 The Reed Frost model has been widely used and served as the basis for the development of more detailed disease propagation simulation studies 9 10 11 Description editThis is an example of a chain binomial model a simplified iterative model of how an epidemic will behave over time The Reed Frost model is one of the simplest stochastic epidemic models It was formulated by Lowell Reed and Wade Frost in 1928 in unpublished work and describes the evolution of an infection in generations Each infected individual in generation t t 1 2 independently infects each susceptible individual in the population with some probability p The individuals that become infected by the individuals in generation t then constitute generation t 1 and the individuals in generation t are removed from the epidemic process 12 The Reed Frost model is based on the following assumptions 13 The infection is spread directly from infected individuals to others by a certain type of contact termed adequate contact and in no other way Any non immune individual in the group after such contact with an infectious individual in a given period will develop the infection and will be infectious to others only within the following time period in subsequent time periods he is wholly and permanently immune Each individual has a fixed probability of coming into adequate contact with any other specified individual in the group within one time interval and this probability is the same for every member of the group The individuals are wholly segregated from others outside the group It is a closed population These conditions remain constant during the epidemic The following parameters are set initially Size of the population Number of individuals already immune Number of cases usually set at 1 Probability of adequate contact With this information a simple formula allows the calculation of how many individuals will be infected and how many immune in the next time interval This is repeated until the entire population is immune or no infective individuals remain The model can then be run repeatedly adjusting the initial conditions to see how these affect the progression of the epidemic The probability of adequate contact corresponds roughly with R0 the basic reproduction number in a large population when the initial number of infecteds is small an infected individual is expected to cause R 0 ln 1 1 p displaystyle mathcal R 0 ln 1 1 p nbsp new cases Mathematics edit Let I t displaystyle I t nbsp represent the number of cases of infection at time t displaystyle t nbsp Assume all cases recover or are removed in exactly one time step Let S t displaystyle S t nbsp represent the number of susceptible individuals at time t displaystyle t nbsp Let B x displaystyle mathcal B x nbsp be a Bernoulli random variable that returns 1 displaystyle 1 nbsp with probability x displaystyle x nbsp and 0 displaystyle 0 nbsp with probability 1 x displaystyle 1 x nbsp Making use of the random variable multiplication convention we can write the Reed Frost model asI t 1 k 0 S t B 1 1 p I t S t 1 S t I t 1 displaystyle begin aligned I t 1 amp sum k 0 S t mathcal B 1 1 p I t S t 1 amp S t I t 1 end aligned nbsp with initial number of susceptible and infected individuals S 0 I 0 displaystyle S 0 I 0 nbsp given Here p displaystyle p nbsp is the probability that a person comes in contact with another person in one time step and that that contact results in disease transmission The deterministic limit is found by replacing the random variables with their expectations I t 1 S t 1 1 p I t S t 1 S t 1 p I t displaystyle begin aligned I t 1 amp S t 1 1 p I t S t 1 amp S t 1 p I t end aligned nbsp See also editKermack McKendrick theory Mathematical modelling of infectious diseaseReferences edit Schwabe CW Riemann HP Franti CE 1977 Epidemiology in Veterinary Practice Lea amp Febiger pp 258 260 Abbey Helen 1952 An examination of the Reed Frost theory of epidemics Hum Biol 3 201 a b c Reed Lowell 1951 Epidemic Theory What Is It Television program Youtube retrieved 21 March 2021 Johns Hopkins Science Review Baltimore MD Jacquez John A 1987 A note on chain binomial models of epidemic spread What is wrong with the Reed Frost formulation Mathematical Biosciences 87 73 82 doi 10 1016 0025 5564 87 90034 4 hdl 2027 42 26512 ISSN 0025 5564 via Elsevier Science Publishing Co Varty Zak 2016 Computer Intensive Methods for Modelling Household Epidemics Lancaster University 6 11 JSTOR 1427536 a href Template Cite journal html title Template Cite journal cite journal a Cite journal requires journal help Abbey H 1952 An examination of the Reed Frost theory of epidemics Human Biology 24 3 201 233 ISSN 0018 7143 PMID 12990130 Soper H E 1929 The Interpretation of Periodicity in Disease Prevalence Journal of the Royal Statistical Society 92 1 34 73 doi 10 2307 2341437 ISSN 0952 8385 JSTOR 2341437 Dietz Klaus 3 May 2009 Epidemics the fitting of the first dynamic models to data Journal of Contemporary Mathematical Analysis 44 2 97 doi 10 3103 S1068362309020034 ISSN 1934 9416 S2CID 162120980 Lowell Reed Johns Hopkins Bloomberg School of Public Health publichealth jhu edu Retrieved 29 October 2021 Engelmann Lukas 30 August 2021 A box a trough and marbles How the Reed Frost epidemic theory shaped epidemiological reasoning in the 20th century History and Philosophy of the Life Sciences 43 3 105 doi 10 1007 s40656 021 00445 z ISSN 1742 6316 PMC 8404547 PMID 34462807 Picard Philippe Lefevre Claude 1990 A Unified Analysis of the Final Size and Severity Distribution in Collective Reed Frost Epidemic Processes Advances in Applied Probability 22 2 269 294 doi 10 2307 1427536 ISSN 0001 8678 JSTOR 1427536 Deijfen Maria 2011 Epidemics and vaccination on weighted graphs Mathematical Biosciences 232 1 57 65 arXiv 1101 4154 doi 10 1016 j mbs 2011 04 003 PMID 21536052 S2CID 1744357 Reed Frost Epidemic Model Ohio Supercomputer Center 29 May 2012 Retrieved from https en wikipedia org w index php title Reed Frost model amp oldid 1175283977, wikipedia, wiki, book, books, library,

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