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Quantum chemistry composite methods

Quantum chemistry composite methods (also referred to as thermochemical recipes)[1][2] are computational chemistry methods that aim for high accuracy by combining the results of several calculations. They combine methods with a high level of theory and a small basis set with methods that employ lower levels of theory with larger basis sets. They are commonly used to calculate thermodynamic quantities such as enthalpies of formation, atomization energies, ionization energies and electron affinities. They aim for chemical accuracy which is usually defined as within 1 kcal/mol of the experimental value. The first systematic model chemistry of this type with broad applicability was called Gaussian-1 (G1) introduced by John Pople. This was quickly replaced by the Gaussian-2 (G2) which has been used extensively. The Gaussian-3 (G3) was introduced later.

Gaussian-n theories edit

Gaussian-2 (G2) edit

The G2 uses seven calculations:

  1. the molecular geometry is obtained by a MP2 optimization using the 6-31G(d) basis set and all electrons included in the perturbation. This geometry is used for all subsequent calculations.
  2. The highest level of theory is a quadratic configuration interaction calculation with single and double excitations and a triples excitation contribution (QCISD(T)) with the 6-311G(d) basis set. Such a calculation in the Gaussian and Spartan programs also give the MP2 and MP4 energies which are also used.
  3. The effect of polarization functions is assessed using an MP4 calculation with the 6-311G(2df,p) basis set.
  4. The effect of diffuse functions is assessed using an MP4 calculation with the 6-311+G(d, p) basis set.
  5. The largest basis set is 6-311+G(3df,2p) used at the MP2 level of theory.
  6. A Hartree–Fock geometry optimization with the 6-31G(d) basis set used to give a geometry for:
  7. A frequency calculation with the 6-31G(d) basis set to obtain the zero-point vibrational energy (ZPVE)

The various energy changes are assumed to be additive so the combined energy is given by:

EQCISD(T) from 2 + [EMP4 from 3 - EMP4 from 2] + [EMP4 from 4 - EMP4 from 2] + [EMP2 from 5 + EMP2 from 2 - EMP2 from 3 - EMP2 from 4]

The second term corrects for the effect of adding the polarization functions. The third term corrects for the diffuse functions. The final term corrects for the larger basis set with the terms from steps 2, 3 and 4 preventing contributions from being counted twice. Two final corrections are made to this energy. The ZPVE is scaled by 0.8929. An empirical correction is then added to account for factors not considered above. This is called the higher level correction (HC) and is given by -0.00481 x (number of valence electrons) -0.00019 x (number of unpaired valence electrons). The two numbers are obtained calibrating the results against the experimental results for a set of molecules. The scaled ZPVE and the HLC are added to give the final energy. For some molecules containing one of the third row elements Ga–Xe, a further term is added to account for spin orbit coupling.

Several variants of this procedure have been used. Removing steps 3 and 4 and relying only on the MP2 result from step 5 is significantly cheaper and only slightly less accurate. This is the G2MP2 method. Sometimes the geometry is obtained using a density functional theory method such as B3LYP and sometimes the QCISD(T) method in step 2 is replaced by the coupled cluster method CCSD(T).

The G2(+) variant, where the "+" symbol refers to added diffuse functions, better describes anions than conventional G2 theory. The 6-31+G(d) basis set is used in place of the 6-31G(d) basis set for both the initial geometry optimization, as well as the second geometry optimization and frequency calculation. Additionally, the frozen-core approximation is made for the initial MP2 optimization, whereas G2 usually uses the full calculation.[3]

Gaussian-3 (G3) edit

The G3 is very similar to G2 but learns from the experience with G2 theory. The 6-311G basis set is replaced by the smaller 6-31G basis. The final MP2 calculations use a larger basis set, generally just called G3large, and correlating all the electrons not just the valence electrons as in G2 theory, additionally a spin-orbit correction term and an empirical correction for valence electrons are introduced. This gives some core correlation contributions to the final energy. The HLC takes the same form but with different empirical parameters.

Gaussian-4 (G4) edit

G4 is a compound method in spirit of the other Gaussian theories and attempts to take the accuracy achieved with G3X one small step further. This involves the introduction of an extrapolation scheme for obtaining basis set limit Hartree-Fock energies, the use of geometries and thermochemical corrections calculated at B3LYP/6-31G(2df,p) level, a highest-level single point calculation at CCSD(T) instead of QCISD(T) level, and addition of extra polarization functions in the largest-basis set MP2 calculations. Thus, Gaussian 4 (G4) theory [4] is an approach for the calculation of energies of molecular species containing first-row, second-row, and third row main group elements. G4 theory is an improved modification of the earlier approach G3 theory. The modifications to G3- theory are the change in an estimate of the Hartree–Fock energy limit, an expanded polarization set for the large basis set calculation, use of CCSD(T) energies, use of geometries from density functional theory and zero-point energies, and two added higher level correction parameters. According to the developers, this theory gives significant improvement over G3-theory. The G4 and the related G4MP2 methods have been extended to cover transition metals.[5] A variant of G4MP2, termed G4(MP2)-6X, has been developed with an aim to improve the accuracy with essentially identical quantum chemistry components.[6] It applies scaling to the energy components in addition to using the HLC. In the G4(MP2)-XK method[7] that is related to G4(MP2)-6X, the Pople-type basis sets[8] are replaced with customized Karlsruhe-type basis sets.[8] In comparison with G4(MP2)-6X, which covers main-group elements up to krypton, G4(MP2)-XK is applicable to main-group elements up to radon.

Feller-Peterson-Dixon approach (FPD) edit

Unlike fixed-recipe, "model chemistries", the FPD approach[9][10][11][12][13] consists of a flexible sequence of (up to) 13 components that vary with the nature of the chemical system under study and the desired accuracy in the final results. In most instances, the primary component relies on coupled cluster theory, such as CCSD(T), or configuration interaction theory combined with large Gaussian basis sets (up through aug-cc-pV8Z, in some cases) and extrapolation to the complete basis set limit. As with some other approaches, additive corrections for core/valence, scalar relativistic and higher order correlation effects are usually included. Attention is paid to the uncertainties associated with each of the components so as to permit a crude estimate of the uncertainty in the overall results. Accurate structural parameters and vibrational frequencies are a natural byproduct of the method. While the computed molecular properties can be highly accurate, the computationally intensive nature of the FPD approach limits the size of the chemical system to which it can be applied to roughly 10 or fewer first/second row atoms.

The FPD Approach has been heavily benchmarked against experiment. When applied at the highest possible level, FDP is capable to yielding a root-mean-square (RMS) deviation with respect to experiment of 0.30 kcal/mol (311 comparisons covering atomization energies, ionization potentials, electron affinities and proton affinities). In terms of equilibrium, bottom-of-the-well structures, FPD gives an RMS deviation of 0.0020 Å (114 comparisons not involving hydrogens) and 0.0034 Å (54 comparisons involving hydrogen). Similar good agreement was found for vibrational frequencies.

T1 edit

 
The calculated T1[1] heat of formation (y axis) compared to the experimental heat of formation (x axis) for a set of >1800 diverse organic molecules from the NIST thermochemical database[14] with mean absolute and RMS errors of 8.5 and 11.5 kJ/mol, respectively.

The T1 method.[1] is an efficient computational approach developed for calculating accurate heats of formation of uncharged, closed-shell molecules comprising H, C, N, O, F, Si, P, S, Cl and Br, within experimental error. It is practical for molecules up to molecular weight ~ 500 a.m.u.

T1 method as incorporated in Spartan consists of:

  1. HF/6-31G* optimization.
  2. RI-MP2/6-311+G(2d,p)[6-311G*] single point energy with dual basis set.
  3. An empirical correction using atom counts, Mulliken bond orders,[15] HF/6-31G* and RI-MP2 energies as variables.

T1 follows the G3(MP2) recipe, however, by substituting an HF/6-31G* for the MP2/6-31G* geometry, eliminating both the HF/6-31G* frequency and QCISD(T)/6-31G* energy and approximating the MP2/G3MP2large energy using dual basis set RI-MP2 techniques, the T1 method reduces computation time by up to 3 orders of magnitude. Atom counts, Mulliken bond orders and HF/6-31G* and RI-MP2 energies are introduced as variables in a linear regression fit to a set of 1126 G3(MP2) heats of formation. The T1 procedure reproduces these values with mean absolute and RMS errors of 1.8 and 2.5 kJ/mol, respectively. T1 reproduces experimental heats of formation for a set of 1805 diverse organic molecules from the NIST thermochemical database[14] with mean absolute and RMS errors of 8.5 and 11.5 kJ/mol, respectively.

Correlation consistent composite approach (ccCA) edit

This approach, developed at the University of North Texas by Angela K. Wilson's research group, utilizes the correlation consistent basis sets developed by Dunning and co-workers.[16][17] Unlike the Gaussian-n methods, ccCA does not contain any empirically fitted term. The B3LYP density functional method with the cc-pVTZ basis set, and cc-pV(T+d)Z for third row elements (Na - Ar), are used to determine the equilibrium geometry. Single point calculations are then used to find the reference energy and additional contributions to the energy. The total ccCA energy for main group is calculated by:

EccCA = EMP2/CBS + ΔECC + ΔECV + ΔESR + ΔEZPE + ΔESO

The reference energy EMP2/CBS is the MP2/aug-cc-pVnZ (where n=D,T,Q) energies extrapolated at the complete basis set limit by the Peterson mixed gaussian exponential extrapolation scheme. CCSD(T)/cc-pVTZ is used to account for correlation beyond the MP2 theory:

ΔECC = ECCSD(T)/cc-pVTZ - EMP2/cc-pVTZ

Core-core and core-valence interactions are accounted for using MP2(FC1)/aug-cc-pCVTZ:

ΔECV= EMP2(FC1)/aug-cc-pCVTZ - EMP2/aug-cc-pVTZ

Scalar relativistic effects are also taken into account with a one-particle Douglass Kroll Hess Hamiltonian and recontracted basis sets:

ΔESR = EMP2-DK/cc-pVTZ-DK - EMP2/cc-pVTZ

The last two terms are zero-point energy corrections scaled with a factor of 0.989 to account for deficiencies in the harmonic approximation and spin-orbit corrections considered only for atoms.

The Correlation Consistent Composite Approach is available as a keyword in NWChem[18] and GAMESS (ccCA-S4 and ccCA-CC(2,3)) [19]

Complete Basis Set methods (CBS) edit

The Complete Basis Set (CBS) methods are a family of composite methods, the members of which are: CBS-4M, CBS-QB3, and CBS-APNO, in increasing order of accuracy. These methods offer errors of 2.5, 1.1, and 0.7 kcal/mol when tested against the G2 test set. The CBS methods were developed by George Petersson and coworkers, and they make extrapolate several single-point energies to the "exact" energy.[20] In comparison, the Gaussian-n methods perform their approximation using additive corrections. Similar to the modified G2(+) method, CBS-QB3 has been modified by the inclusion of diffuse functions in the geometry optimization step to give CBS-QB3(+).[21] The CBS family of methods is available via keywords in the Gaussian 09 suite of programs.[22]

Weizmann-n theories edit

The Weizmann-n ab initio methods (Wn, n = 1–4)[23][24][25] are highly accurate composite theories devoid of empirical parameters. These theories are capable of sub-kJ/mol accuracies in prediction of fundamental thermochemical quantities such as heats of formation and atomization energies,[2][26] and unprecedented accuracies in prediction of spectroscopic constants.[27] The Wn-P34 variants further extend the applicability from first- and second-row species to include heavy main-group systems (up to xenon).[28]

The ability of these theories to successfully reproduce the CCSD(T)/CBS (W1 and W2), CCSDT(Q)/CBS (W3), and CCSDTQ5/CBS (W4) energies relies on judicious combination of very large Gaussian basis sets with basis-set extrapolation techniques. Thus, the high accuracy of Wn theories comes with the price of a significant computational cost. In practice, for systems consisting of more than ~9 non-hydrogen atoms (with C1 symmetry), even the computationally more economical W1 theory becomes prohibitively expensive with current mainstream server hardware.

In an attempt to extend the applicability of the Wn ab initio thermochemistry methods, explicitly correlated versions of these theories have been developed: Wn-F12 (n = 1–3)[29] and more recently even a W4-F12 theory.[30] W1-F12 was successfully applied to large hydrocarbons (e.g., dodecahedrane,[31] as well as to systems of biological relevance (e.g., DNA bases).[29] W4-F12 theory has been applied to systems as large as benzene.[30] In a similar manner, the WnX protocols that have been developed independently further reduce the requirements on computational resources by using more efficient basis sets and, for the minor components, electron-correlation methods that are computationally less demanding.[32][33][34]

References edit

  1. ^ a b c Ohlinger, William S.; Philip E. Klunzinger; Bernard J. Deppmeier; Warren J. Hehre (January 2009). "Efficient Calculation of Heats of Formation". The Journal of Physical Chemistry A. 113 (10). ACS Publications: 2165–2175. Bibcode:2009JPCA..113.2165O. doi:10.1021/jp810144q. PMID 19222177.
  2. ^ a b A. Karton (2016). "A computational chemist's guide to accurate thermochemistry for organic molecules" (PDF). Wiley Interdisciplinary Reviews: Computational Molecular Science. 6 (3): 292–310. doi:10.1002/wcms.1249. S2CID 102248364.
  3. ^ Mikhail N. Glukhovtsev; Addy Pross; Leo Radom (1996). "Gas-Phase Non-Identity SN2 Reactions of Halide Anions with Methyl Halides: A High-Level Computational Study". J. Am. Chem. Soc. 118 (26): 6273–6284. doi:10.1021/ja953665n.
  4. ^ Curtiss, Larry A.; Paul C. Redfern; Krishan Raghavachari (2007). "Gaussian-4 theory". The Journal of Chemical Physics. 126 (8): 084108. Bibcode:2007JChPh.126h4108C. doi:10.1063/1.2436888. PMID 17343441.
  5. ^ Mayhall, Nicholas J.; Raghavachari, Krishnan; Redfern, Paul C.; Curtiss, Larry A. (2009-04-30). "Investigation of Gaussian4 Theory for Transition Metal Thermochemistry". The Journal of Physical Chemistry A. 113 (17): 5170–5175. Bibcode:2009JPCA..113.5170M. doi:10.1021/jp809179q. ISSN 1089-5639. PMID 19341257.
  6. ^ Chan, Bun; Deng, Jia; Radom, Leo (2011-01-11). "G4(MP2)-6X: A Cost-Effective Improvement to G4(MP2)". Journal of Chemical Theory and Computation. 7 (1): 112–120. doi:10.1021/ct100542x. ISSN 1549-9618. PMID 26606224.
  7. ^ Chan, Bun; Karton, Amir; Raghavachari, Krishnan (2019-08-13). "G4(MP2)-XK: A Variant of the G4(MP2)-6X Composite Method with Expanded Applicability for Main-Group Elements up to Radon". Journal of Chemical Theory and Computation. 15 (8): 4478–4484. doi:10.1021/acs.jctc.9b00449. ISSN 1549-9618. PMID 31287695. S2CID 195872288.
  8. ^ a b "Basis set (chemistry)", Wikipedia, 2019-12-03, retrieved 2019-12-06
  9. ^ David Feller, Kirk A Peterson and David A Dixon (2008). "A survey of factors contributing to accurate theoretical predictions of atomization energies and molecular structures". Journal of Chemical Physics. 129 (20): 204105–1–204105–30. Bibcode:2008JChPh.129t4105F. doi:10.1063/1.3008061. PMID 19045850.
  10. ^ David A Dixon, David Feller and Kirk A Peterson (2012). "A Practical Guide to Reliable First Principles Computational Thermochemistry Predictions Across the Periodic Table". Annual Reports in Computational Chemistry Volume 8. Vol. 8. pp. 1–28. doi:10.1016/B978-0-444-59440-2.00001-6. ISBN 9780444594402.
  11. ^ David Feller, Kirk A Peterson and David A Dixon (2012). "Further benchmarks of a composite, convergent, statistically calibrated coupled-cluster-based approach for thermochemical and spectroscopic studies". Molecular Physics. 110 (19–20): 2381–2399. Bibcode:2012MolPh.110.2381F. doi:10.1080/00268976.2012.684897. S2CID 93836763.
  12. ^ Kirk A Peterson, David Feller and David A Dixon (2012). "Chemical accuracy in ab initio thermochemistry and spectroscopy: current strategies and future challenges". Theoretical Chemistry Accounts. 131: 1079–5. doi:10.1007/s00214-011-1079-5. S2CID 93914881.
  13. ^ David Feller, Kirk A Peterson and Branko Ruscic (2014). "Improved accuracy benchmarks of small molecules using correlation consistent basis sets". Theoretical Chemistry Accounts. 133: 1407–16. doi:10.1007/s00214-013-1407-z. S2CID 95693045.
  14. ^ a b [1] NIST Chemistry WebBook
  15. ^ Mulliken, R. S. (1955). "Electronic Population Analysis on LCAO-MO Molecular Wave Functions. I". The Journal of Chemical Physics. 23 (10): 1833–1840. Bibcode:1955JChPh..23.1833M. doi:10.1063/1.1740588.
  16. ^ Deyonker, Nathan J.; Cundari, Thomas R.; Wilson, Angela K. (2006). "The correlation consistent composite approach (ccCA): An alternative to the Gaussian-n methods". J. Chem. Phys. 124 (11): 114104. Bibcode:2006JChPh.124k4104D. doi:10.1063/1.2173988. PMID 16555871.
  17. ^ Fabian, Walter M. F. (2008). "Accurate thermochemistry from quantum chemical calculations?". Monatshefte für Chemie. 139 (4): 309–318. doi:10.1007/s00706-007-0798-8. S2CID 97222411.
  18. ^ "Correlation consistent Composite Approach (ccCA)". NWChem.
  19. ^ "GAMESS Correlation consistent Composite Approach (ccCA)" (PDF). Gordon Group.
  20. ^ Petersson, G. (2002). "Complete Basis Set Models for Chemical Reactivity: from the Helium Atom to Enzyme Kinetics". In Cioslowski, J. (ed.). Quantum-Mechanical Prediction of Thermochemical Data. Understanding Chemical Reactivity. Vol. 22. Springer Netherlands. pp. 99–130. doi:10.1007/0-306-47632-0_4. ISBN 0-7923-7077-5.
  21. ^ Srinivasan Parthiban; Glênisson de Oliveira; Jan M. L. Martin (2001). "Benchmark ab Initio Energy Profiles for the Gas-Phase SN2 Reactions Y- + CH3X → CH3Y + X- (X,Y = F,Cl,Br). Validation of Hybrid DFT Methods". J. Phys. Chem. A. 105 (5): 895–904. arXiv:physics/0011029. Bibcode:2001JPCA..105..895P. doi:10.1021/jp0031000. S2CID 95515149.
  22. ^ "CBS Methods". Gaussian 09 User's Reference. Gaussian, Inc.
  23. ^ J. M. L. Martin & G. de Oliveira (1999). "Towards standard methods for benchmark quality ab initio thermochemistry—W1 and W2 theory". Journal of Chemical Physics. 111 (5): 1843–1856. arXiv:physics/9904038. Bibcode:1999JChPh.111.1843M. doi:10.1063/1.479454. S2CID 3185188.
  24. ^ A. D. Boese; M. Oren; O. Atasoylu; J. M. L. Martin; M. Kállay & J. Gauss (2004). "W3 theory: Robust computational thermochemistry in the kJ/mol accuracy range". Journal of Chemical Physics. 120 (9): 4129–4141. arXiv:physics/0311067. Bibcode:2004JChPh.120.4129B. doi:10.1063/1.1638736. PMID 15268579. S2CID 11724790.
  25. ^ A. Karton; E. Rabinovich; J. M. L. Martin; B. Ruscic (2006). "W4 theory for computational thermochemistry: In pursuit of confident sub-kJ/mol predictions". Journal of Chemical Physics. 125 (14): 144108. arXiv:physics/0608123. Bibcode:2006JChPh.125n4108K. doi:10.1063/1.2348881. PMID 17042580. S2CID 17920352.
  26. ^ A. Karton, S. Daon & J. M. L. Martin (2011). "W4-11: A high-confidence dataset for computational thermochemistry derived from W4 ab initio data" (PDF). Chemical Physics Letters. 510 (4–6): 165. Bibcode:2011CPL...510..165K. doi:10.1016/j.cplett.2011.05.007.
  27. ^ A. Karton & J. M. L. Martin (2010). "Performance of W4 theory for spectroscopic constants and electrical properties of small molecules". Journal of Chemical Physics. 133 (14): 144102. arXiv:1008.4163. Bibcode:2010JChPh.133n4102K. doi:10.1063/1.3489113. PMID 20949982. S2CID 22474546.
  28. ^ Chan, Bun (14 September 2021). "Accurate Thermochemistry for Main-Group Elements up to Xenon with the Wn-P34 Series of Composite Methods". Journal of Chemical Theory and Computation. 17 (9): 5704–5714. doi:10.1021/acs.jctc.1c00598. PMID 34410730. S2CID 237243266.
  29. ^ a b A. Karton & J. M. L. Martin (2012). "Explicitly correlated Wn theory: W1–F12 and W2–F12". Journal of Chemical Physics. 136 (12): 124114. Bibcode:2012JChPh.136l4114K. doi:10.1063/1.3697678. PMID 22462842.
  30. ^ a b N. Sylvetsky; K. A. Peterson; A. Karton & J. M. L. Martin (2016). "Toward a W4-F12 approach: Can explicitly correlated and orbital-based ab initio CCSD(T) limits be reconciled?". Journal of Chemical Physics. 144 (21): 214101. arXiv:1605.03398. Bibcode:2016JChPh.144u4101S. doi:10.1063/1.4952410. PMID 27276939. S2CID 20846029.
  31. ^ A. Karton; P. R. Schreiner & J. M. L. Martin (2016). "Heats of formation of platonic hydrocarbon cages by means of high-level thermochemical procedures" (PDF). Journal of Computational Chemistry. 37 (1): 49–58. doi:10.1002/jcc.23963. PMID 26096132. S2CID 10434119.
  32. ^ Chan, Bun; Radom, Leo (2012-11-13). "W1X-1 and W1X-2: W1-Quality Accuracy with an Order of Magnitude Reduction in Computational Cost". Journal of Chemical Theory and Computation. 8 (11): 4259–4269. doi:10.1021/ct300632p. ISSN 1549-9618. PMID 26605589.
  33. ^ Chan, Bun; Radom, Leo (2013-11-12). "W3X: A Cost-Effective Post-CCSD(T) Composite Procedure". Journal of Chemical Theory and Computation. 9 (11): 4769–4778. doi:10.1021/ct4005323. ISSN 1549-9618. PMID 26583395.
  34. ^ Chan, Bun; Radom, Leo (2015-05-12). "W2X and W3X-L: Cost-Effective Approximations to W2 and W4 with kJ mol–1 Accuracy". Journal of Chemical Theory and Computation. 11 (5): 2109–2119. doi:10.1021/acs.jctc.5b00135. ISSN 1549-9618. PMID 26574414.
  • Cramer, Christopher J. (2002). Essentials of Computational Chemistry. Chichester: John Wiley and Sons. pp. 224–228. ISBN 0-471-48552-7.
  • Jensen, Frank (2007). Introduction to Computational Chemistry. Chichester, England: John Wiley and Sons. pp. 164–169. ISBN 978-0-470-01187-4.

quantum, chemistry, composite, methods, also, referred, thermochemical, recipes, computational, chemistry, methods, that, high, accuracy, combining, results, several, calculations, they, combine, methods, with, high, level, theory, small, basis, with, methods,. Quantum chemistry composite methods also referred to as thermochemical recipes 1 2 are computational chemistry methods that aim for high accuracy by combining the results of several calculations They combine methods with a high level of theory and a small basis set with methods that employ lower levels of theory with larger basis sets They are commonly used to calculate thermodynamic quantities such as enthalpies of formation atomization energies ionization energies and electron affinities They aim for chemical accuracy which is usually defined as within 1 kcal mol of the experimental value The first systematic model chemistry of this type with broad applicability was called Gaussian 1 G1 introduced by John Pople This was quickly replaced by the Gaussian 2 G2 which has been used extensively The Gaussian 3 G3 was introduced later Contents 1 Gaussian n theories 1 1 Gaussian 2 G2 1 2 Gaussian 3 G3 1 3 Gaussian 4 G4 2 Feller Peterson Dixon approach FPD 3 T1 4 Correlation consistent composite approach ccCA 5 Complete Basis Set methods CBS 6 Weizmann n theories 7 ReferencesGaussian n theories editGaussian 2 G2 edit The G2 uses seven calculations the molecular geometry is obtained by a MP2 optimization using the 6 31G d basis set and all electrons included in the perturbation This geometry is used for all subsequent calculations The highest level of theory is a quadratic configuration interaction calculation with single and double excitations and a triples excitation contribution QCISD T with the 6 311G d basis set Such a calculation in the Gaussian and Spartan programs also give the MP2 and MP4 energies which are also used The effect of polarization functions is assessed using an MP4 calculation with the 6 311G 2df p basis set The effect of diffuse functions is assessed using an MP4 calculation with the 6 311 G d p basis set The largest basis set is 6 311 G 3df 2p used at the MP2 level of theory A Hartree Fock geometry optimization with the 6 31G d basis set used to give a geometry for A frequency calculation with the 6 31G d basis set to obtain the zero point vibrational energy ZPVE The various energy changes are assumed to be additive so the combined energy is given by EQCISD T from 2 EMP4 from 3 EMP4 from 2 EMP4 from 4 EMP4 from 2 EMP2 from 5 EMP2 from 2 EMP2 from 3 EMP2 from 4 The second term corrects for the effect of adding the polarization functions The third term corrects for the diffuse functions The final term corrects for the larger basis set with the terms from steps 2 3 and 4 preventing contributions from being counted twice Two final corrections are made to this energy The ZPVE is scaled by 0 8929 An empirical correction is then added to account for factors not considered above This is called the higher level correction HC and is given by 0 00481 x number of valence electrons 0 00019 x number of unpaired valence electrons The two numbers are obtained calibrating the results against the experimental results for a set of molecules The scaled ZPVE and the HLC are added to give the final energy For some molecules containing one of the third row elements Ga Xe a further term is added to account for spin orbit coupling Several variants of this procedure have been used Removing steps 3 and 4 and relying only on the MP2 result from step 5 is significantly cheaper and only slightly less accurate This is the G2MP2 method Sometimes the geometry is obtained using a density functional theory method such as B3LYP and sometimes the QCISD T method in step 2 is replaced by the coupled cluster method CCSD T The G2 variant where the symbol refers to added diffuse functions better describes anions than conventional G2 theory The 6 31 G d basis set is used in place of the 6 31G d basis set for both the initial geometry optimization as well as the second geometry optimization and frequency calculation Additionally the frozen core approximation is made for the initial MP2 optimization whereas G2 usually uses the full calculation 3 Gaussian 3 G3 edit The G3 is very similar to G2 but learns from the experience with G2 theory The 6 311G basis set is replaced by the smaller 6 31G basis The final MP2 calculations use a larger basis set generally just called G3large and correlating all the electrons not just the valence electrons as in G2 theory additionally a spin orbit correction term and an empirical correction for valence electrons are introduced This gives some core correlation contributions to the final energy The HLC takes the same form but with different empirical parameters Gaussian 4 G4 edit G4 is a compound method in spirit of the other Gaussian theories and attempts to take the accuracy achieved with G3X one small step further This involves the introduction of an extrapolation scheme for obtaining basis set limit Hartree Fock energies the use of geometries and thermochemical corrections calculated at B3LYP 6 31G 2df p level a highest level single point calculation at CCSD T instead of QCISD T level and addition of extra polarization functions in the largest basis set MP2 calculations Thus Gaussian 4 G4 theory 4 is an approach for the calculation of energies of molecular species containing first row second row and third row main group elements G4 theory is an improved modification of the earlier approach G3 theory The modifications to G3 theory are the change in an estimate of the Hartree Fock energy limit an expanded polarization set for the large basis set calculation use of CCSD T energies use of geometries from density functional theory and zero point energies and two added higher level correction parameters According to the developers this theory gives significant improvement over G3 theory The G4 and the related G4MP2 methods have been extended to cover transition metals 5 A variant of G4MP2 termed G4 MP2 6X has been developed with an aim to improve the accuracy with essentially identical quantum chemistry components 6 It applies scaling to the energy components in addition to using the HLC In the G4 MP2 XK method 7 that is related to G4 MP2 6X the Pople type basis sets 8 are replaced with customized Karlsruhe type basis sets 8 In comparison with G4 MP2 6X which covers main group elements up to krypton G4 MP2 XK is applicable to main group elements up to radon Feller Peterson Dixon approach FPD editUnlike fixed recipe model chemistries the FPD approach 9 10 11 12 13 consists of a flexible sequence of up to 13 components that vary with the nature of the chemical system under study and the desired accuracy in the final results In most instances the primary component relies on coupled cluster theory such as CCSD T or configuration interaction theory combined with large Gaussian basis sets up through aug cc pV8Z in some cases and extrapolation to the complete basis set limit As with some other approaches additive corrections for core valence scalar relativistic and higher order correlation effects are usually included Attention is paid to the uncertainties associated with each of the components so as to permit a crude estimate of the uncertainty in the overall results Accurate structural parameters and vibrational frequencies are a natural byproduct of the method While the computed molecular properties can be highly accurate the computationally intensive nature of the FPD approach limits the size of the chemical system to which it can be applied to roughly 10 or fewer first second row atoms The FPD Approach has been heavily benchmarked against experiment When applied at the highest possible level FDP is capable to yielding a root mean square RMS deviation with respect to experiment of 0 30 kcal mol 311 comparisons covering atomization energies ionization potentials electron affinities and proton affinities In terms of equilibrium bottom of the well structures FPD gives an RMS deviation of 0 0020 A 114 comparisons not involving hydrogens and 0 0034 A 54 comparisons involving hydrogen Similar good agreement was found for vibrational frequencies T1 edit nbsp The calculated T1 1 heat of formation y axis compared to the experimental heat of formation x axis for a set of gt 1800 diverse organic molecules from the NIST thermochemical database 14 with mean absolute and RMS errors of 8 5 and 11 5 kJ mol respectively The T1 method 1 is an efficient computational approach developed for calculating accurate heats of formation of uncharged closed shell molecules comprising H C N O F Si P S Cl and Br within experimental error It is practical for molecules up to molecular weight 500 a m u T1 method as incorporated in Spartan consists of HF 6 31G optimization RI MP2 6 311 G 2d p 6 311G single point energy with dual basis set An empirical correction using atom counts Mulliken bond orders 15 HF 6 31G and RI MP2 energies as variables T1 follows the G3 MP2 recipe however by substituting an HF 6 31G for the MP2 6 31G geometry eliminating both the HF 6 31G frequency and QCISD T 6 31G energy and approximating the MP2 G3MP2large energy using dual basis set RI MP2 techniques the T1 method reduces computation time by up to 3 orders of magnitude Atom counts Mulliken bond orders and HF 6 31G and RI MP2 energies are introduced as variables in a linear regression fit to a set of 1126 G3 MP2 heats of formation The T1 procedure reproduces these values with mean absolute and RMS errors of 1 8 and 2 5 kJ mol respectively T1 reproduces experimental heats of formation for a set of 1805 diverse organic molecules from the NIST thermochemical database 14 with mean absolute and RMS errors of 8 5 and 11 5 kJ mol respectively Correlation consistent composite approach ccCA editThis approach developed at the University of North Texas by Angela K Wilson s research group utilizes the correlation consistent basis sets developed by Dunning and co workers 16 17 Unlike the Gaussian n methods ccCA does not contain any empirically fitted term The B3LYP density functional method with the cc pVTZ basis set and cc pV T d Z for third row elements Na Ar are used to determine the equilibrium geometry Single point calculations are then used to find the reference energy and additional contributions to the energy The total ccCA energy for main group is calculated by EccCA EMP2 CBS DECC DECV DESR DEZPE DESO The reference energy EMP2 CBS is the MP2 aug cc pVnZ where n D T Q energies extrapolated at the complete basis set limit by the Peterson mixed gaussian exponential extrapolation scheme CCSD T cc pVTZ is used to account for correlation beyond the MP2 theory DECC ECCSD T cc pVTZ EMP2 cc pVTZ Core core and core valence interactions are accounted for using MP2 FC1 aug cc pCVTZ DECV EMP2 FC1 aug cc pCVTZ EMP2 aug cc pVTZ Scalar relativistic effects are also taken into account with a one particle Douglass Kroll Hess Hamiltonian and recontracted basis sets DESR EMP2 DK cc pVTZ DK EMP2 cc pVTZ The last two terms are zero point energy corrections scaled with a factor of 0 989 to account for deficiencies in the harmonic approximation and spin orbit corrections considered only for atoms The Correlation Consistent Composite Approach is available as a keyword in NWChem 18 and GAMESS ccCA S4 and ccCA CC 2 3 19 Complete Basis Set methods CBS editThe Complete Basis Set CBS methods are a family of composite methods the members of which are CBS 4M CBS QB3 and CBS APNO in increasing order of accuracy These methods offer errors of 2 5 1 1 and 0 7 kcal mol when tested against the G2 test set The CBS methods were developed by George Petersson and coworkers and they make extrapolate several single point energies to the exact energy 20 In comparison the Gaussian n methods perform their approximation using additive corrections Similar to the modified G2 method CBS QB3 has been modified by the inclusion of diffuse functions in the geometry optimization step to give CBS QB3 21 The CBS family of methods is available via keywords in the Gaussian 09 suite of programs 22 Weizmann n theories editThe Weizmann n ab initio methods Wn n 1 4 23 24 25 are highly accurate composite theories devoid of empirical parameters These theories are capable of sub kJ mol accuracies in prediction of fundamental thermochemical quantities such as heats of formation and atomization energies 2 26 and unprecedented accuracies in prediction of spectroscopic constants 27 The Wn P34 variants further extend the applicability from first and second row species to include heavy main group systems up to xenon 28 The ability of these theories to successfully reproduce the CCSD T CBS W1 and W2 CCSDT Q CBS W3 and CCSDTQ5 CBS W4 energies relies on judicious combination of very large Gaussian basis sets with basis set extrapolation techniques Thus the high accuracy of Wn theories comes with the price of a significant computational cost In practice for systems consisting of more than 9 non hydrogen atoms with C1 symmetry even the computationally more economical W1 theory becomes prohibitively expensive with current mainstream server hardware In an attempt to extend the applicability of the Wn ab initio thermochemistry methods explicitly correlated versions of these theories have been developed Wn F12 n 1 3 29 and more recently even a W4 F12 theory 30 W1 F12 was successfully applied to large hydrocarbons e g dodecahedrane 31 as well as to systems of biological relevance e g DNA bases 29 W4 F12 theory has been applied to systems as large as benzene 30 In a similar manner the WnX protocols that have been developed independently further reduce the requirements on computational resources by using more efficient basis sets and for the minor components electron correlation methods that are computationally less demanding 32 33 34 References edit a b c Ohlinger William S Philip E Klunzinger Bernard J Deppmeier Warren J Hehre January 2009 Efficient Calculation of Heats of Formation The Journal of Physical Chemistry A 113 10 ACS Publications 2165 2175 Bibcode 2009JPCA 113 2165O doi 10 1021 jp810144q PMID 19222177 a b A Karton 2016 A computational chemist s guide to accurate thermochemistry for organic molecules PDF Wiley Interdisciplinary Reviews Computational Molecular Science 6 3 292 310 doi 10 1002 wcms 1249 S2CID 102248364 Mikhail N Glukhovtsev Addy Pross Leo Radom 1996 Gas Phase Non Identity SN2 Reactions of Halide Anions with Methyl Halides A High Level Computational Study J Am Chem Soc 118 26 6273 6284 doi 10 1021 ja953665n Curtiss Larry A Paul C Redfern Krishan Raghavachari 2007 Gaussian 4 theory The Journal of Chemical Physics 126 8 084108 Bibcode 2007JChPh 126h4108C doi 10 1063 1 2436888 PMID 17343441 Mayhall Nicholas J Raghavachari Krishnan Redfern Paul C Curtiss Larry A 2009 04 30 Investigation of Gaussian4 Theory for Transition Metal Thermochemistry The Journal of Physical Chemistry A 113 17 5170 5175 Bibcode 2009JPCA 113 5170M doi 10 1021 jp809179q ISSN 1089 5639 PMID 19341257 Chan Bun Deng Jia Radom Leo 2011 01 11 G4 MP2 6X A Cost Effective Improvement to G4 MP2 Journal of Chemical Theory and Computation 7 1 112 120 doi 10 1021 ct100542x ISSN 1549 9618 PMID 26606224 Chan Bun Karton Amir Raghavachari Krishnan 2019 08 13 G4 MP2 XK A Variant of the G4 MP2 6X Composite Method with Expanded Applicability for Main Group Elements up to Radon Journal of Chemical Theory and Computation 15 8 4478 4484 doi 10 1021 acs jctc 9b00449 ISSN 1549 9618 PMID 31287695 S2CID 195872288 a b Basis set chemistry Wikipedia 2019 12 03 retrieved 2019 12 06 David Feller Kirk A Peterson and David A Dixon 2008 A survey of factors contributing to accurate theoretical predictions of atomization energies and molecular structures Journal of Chemical Physics 129 20 204105 1 204105 30 Bibcode 2008JChPh 129t4105F doi 10 1063 1 3008061 PMID 19045850 David A Dixon David Feller and Kirk A Peterson 2012 A Practical Guide to Reliable First Principles Computational Thermochemistry Predictions Across the Periodic Table Annual Reports in Computational Chemistry Volume 8 Vol 8 pp 1 28 doi 10 1016 B978 0 444 59440 2 00001 6 ISBN 9780444594402 David Feller Kirk A Peterson and David A Dixon 2012 Further benchmarks of a composite convergent statistically calibrated coupled cluster based approach for thermochemical and spectroscopic studies Molecular Physics 110 19 20 2381 2399 Bibcode 2012MolPh 110 2381F doi 10 1080 00268976 2012 684897 S2CID 93836763 Kirk A Peterson David Feller and David A Dixon 2012 Chemical accuracy in ab initio thermochemistry and spectroscopy current strategies and future challenges Theoretical Chemistry Accounts 131 1079 5 doi 10 1007 s00214 011 1079 5 S2CID 93914881 David Feller Kirk A Peterson and Branko Ruscic 2014 Improved accuracy benchmarks of small molecules using correlation consistent basis sets Theoretical Chemistry Accounts 133 1407 16 doi 10 1007 s00214 013 1407 z S2CID 95693045 a b 1 NIST Chemistry WebBook Mulliken R S 1955 Electronic Population Analysis on LCAO MO Molecular Wave Functions I The Journal of Chemical Physics 23 10 1833 1840 Bibcode 1955JChPh 23 1833M doi 10 1063 1 1740588 Deyonker Nathan J Cundari Thomas R Wilson Angela K 2006 The correlation consistent composite approach ccCA An alternative to the Gaussian n methods J Chem Phys 124 11 114104 Bibcode 2006JChPh 124k4104D doi 10 1063 1 2173988 PMID 16555871 Fabian Walter M F 2008 Accurate thermochemistry from quantum chemical calculations Monatshefte fur Chemie 139 4 309 318 doi 10 1007 s00706 007 0798 8 S2CID 97222411 Correlation consistent Composite Approach ccCA NWChem GAMESS Correlation consistent Composite Approach ccCA PDF Gordon Group Petersson G 2002 Complete Basis Set Models for Chemical Reactivity from the Helium Atom to Enzyme Kinetics In Cioslowski J ed Quantum Mechanical Prediction of Thermochemical Data Understanding Chemical Reactivity Vol 22 Springer Netherlands pp 99 130 doi 10 1007 0 306 47632 0 4 ISBN 0 7923 7077 5 Srinivasan Parthiban Glenisson de Oliveira Jan M L Martin 2001 Benchmark ab Initio Energy Profiles for the Gas Phase SN2 Reactions Y CH3X CH3Y X X Y F Cl Br Validation of Hybrid DFT Methods J Phys Chem A 105 5 895 904 arXiv physics 0011029 Bibcode 2001JPCA 105 895P doi 10 1021 jp0031000 S2CID 95515149 CBS Methods Gaussian 09 User s Reference Gaussian Inc J M L Martin amp G de Oliveira 1999 Towards standard methods for benchmark quality ab initio thermochemistry W1 and W2 theory Journal of Chemical Physics 111 5 1843 1856 arXiv physics 9904038 Bibcode 1999JChPh 111 1843M doi 10 1063 1 479454 S2CID 3185188 A D Boese M Oren O Atasoylu J M L Martin M Kallay amp J Gauss 2004 W3 theory Robust computational thermochemistry in the kJ mol accuracy range Journal of Chemical Physics 120 9 4129 4141 arXiv physics 0311067 Bibcode 2004JChPh 120 4129B doi 10 1063 1 1638736 PMID 15268579 S2CID 11724790 A Karton E Rabinovich J M L Martin B Ruscic 2006 W4 theory for computational thermochemistry In pursuit of confident sub kJ mol predictions Journal of Chemical Physics 125 14 144108 arXiv physics 0608123 Bibcode 2006JChPh 125n4108K doi 10 1063 1 2348881 PMID 17042580 S2CID 17920352 A Karton S Daon amp J M L Martin 2011 W4 11 A high confidence dataset for computational thermochemistry derived from W4 ab initio data PDF Chemical Physics Letters 510 4 6 165 Bibcode 2011CPL 510 165K doi 10 1016 j cplett 2011 05 007 A Karton amp J M L Martin 2010 Performance of W4 theory for spectroscopic constants and electrical properties of small molecules Journal of Chemical Physics 133 14 144102 arXiv 1008 4163 Bibcode 2010JChPh 133n4102K doi 10 1063 1 3489113 PMID 20949982 S2CID 22474546 Chan Bun 14 September 2021 Accurate Thermochemistry for Main Group Elements up to Xenon with the Wn P34 Series of Composite Methods Journal of Chemical Theory and Computation 17 9 5704 5714 doi 10 1021 acs jctc 1c00598 PMID 34410730 S2CID 237243266 a b A Karton amp J M L Martin 2012 Explicitly correlated Wn theory W1 F12 and W2 F12 Journal of Chemical Physics 136 12 124114 Bibcode 2012JChPh 136l4114K doi 10 1063 1 3697678 PMID 22462842 a b N Sylvetsky K A Peterson A Karton amp J M L Martin 2016 Toward a W4 F12 approach Can explicitly correlated and orbital based ab initio CCSD T limits be reconciled Journal of Chemical Physics 144 21 214101 arXiv 1605 03398 Bibcode 2016JChPh 144u4101S doi 10 1063 1 4952410 PMID 27276939 S2CID 20846029 A Karton P R Schreiner amp J M L Martin 2016 Heats of formation of platonic hydrocarbon cages by means of high level thermochemical procedures PDF Journal of Computational Chemistry 37 1 49 58 doi 10 1002 jcc 23963 PMID 26096132 S2CID 10434119 Chan Bun Radom Leo 2012 11 13 W1X 1 and W1X 2 W1 Quality Accuracy with an Order of Magnitude Reduction in Computational Cost Journal of Chemical Theory and Computation 8 11 4259 4269 doi 10 1021 ct300632p ISSN 1549 9618 PMID 26605589 Chan Bun Radom Leo 2013 11 12 W3X A Cost Effective Post CCSD T Composite Procedure Journal of Chemical Theory and Computation 9 11 4769 4778 doi 10 1021 ct4005323 ISSN 1549 9618 PMID 26583395 Chan Bun Radom Leo 2015 05 12 W2X and W3X L Cost Effective Approximations to W2 and W4 with kJ mol 1 Accuracy Journal of Chemical Theory and Computation 11 5 2109 2119 doi 10 1021 acs jctc 5b00135 ISSN 1549 9618 PMID 26574414 Cramer Christopher J 2002 Essentials of Computational Chemistry Chichester John Wiley and Sons pp 224 228 ISBN 0 471 48552 7 Jensen Frank 2007 Introduction to Computational Chemistry Chichester England John Wiley and Sons pp 164 169 ISBN 978 0 470 01187 4 Retrieved from https en wikipedia org w index php title Quantum chemistry composite methods amp oldid 1221762750, wikipedia, wiki, book, books, library,

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