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Wikipedia

PCGF5

March 15, 2024

Polycomb group RING finger protein 5 is a protein that in humans is encoded by the PCGF5 gene.[5][6]

PCGF5
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesPCGF5, RNF159, polycomb group ring finger 5
External IDsOMIM: 617407 MGI: 1923505 HomoloGene: 12632 GeneCards: PCGF5
Orthologs
SpeciesHumanMouse
Entrez

84333

76073

Ensembl

ENSG00000180628

ENSMUSG00000024805

UniProt

Q86SE9

Q3UK78

RefSeq (mRNA)

NM_001256549
NM_001257101
NM_032373

NM_029508
NM_001368690
NM_001368691
NM_001368692
NM_001368693

RefSeq (protein)

NP_001243478
NP_001244030
NP_115749

NP_083784
NP_001355619
NP_001355620
NP_001355621
NP_001355622

Location (UCSC)Chr 10: 91.16 – 91.28 MbChr 19: 36.33 – 36.44 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse


References edit

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000180628 - Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000024805 - Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Matoba R, Okubo K, Hori N, Fukushima A, Matsubara K (Oct 1994). "The addition of 5'-coding information to a 3'-directed cDNA library improves analysis of gene expression". Gene. 146 (2): 199–207. doi:10.1016/0378-1119(94)90293-3. PMID 8076819.
  6. ^ "Entrez Gene: PCGF5 polycomb group ring finger 5".

Further reading edit

  • Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.


 

This article on a gene on human chromosome 10 is a stub. You can help Wikipedia by expanding it.

March 15, 2024
pcgf5, polycomb, group, ring, finger, protein, protein, that, humans, encoded, gene, available, structurespdbortholog, search, pdbe, rcsblist, codes4s3oidentifiersaliases, rnf159, polycomb, group, ring, finger, 5external, idsomim, 617407, 1923505, homologene, . Polycomb group RING finger protein 5 is a protein that in humans is encoded by the PCGF5 gene 5 6 PCGF5Available structuresPDBOrtholog search PDBe RCSBList of PDB id codes4S3OIdentifiersAliasesPCGF5 RNF159 polycomb group ring finger 5External IDsOMIM 617407 MGI 1923505 HomoloGene 12632 GeneCards PCGF5Gene location Human Chr Chromosome 10 human 1 Band10q23 32Start91 163 012 bp 1 End91 284 337 bp 1 Gene location Mouse Chr Chromosome 19 mouse 2 Band19 19 C2Start36 325 709 bp 2 End36 438 370 bp 2 RNA expression patternBgeeHumanMouse ortholog Top expressed inbloodsuperior vestibular nucleussaphenous veinmonocyteoocyteurethraglobus pallidusinternal globus pallidusexternal globus pallidussubthalamic nucleusTop expressed inspermatocyteascending aortaaortic valveotolith organutricleseminiferous tubuleatrioventricular valveknee jointciliary bodyspermatidMore reference expression dataBioGPSn aGene ontologyMolecular functionprotein binding metal ion binding RNA polymerase II transcription regulatory region sequence specific DNA binding DNA binding transcription factor activityCellular componentcentrosome nucleolus nucleus nucleoplasm X chromosome PcG protein complex PRC1 complexBiological processregulation of transcription DNA templated transcription DNA templated positive regulation of transcription by RNA polymerase II histone H2A K119 monoubiquitination inactivation of X chromosome by genetic imprintingSources Amigo QuickGOOrthologsSpeciesHumanMouseEntrez8433376073EnsemblENSG00000180628ENSMUSG00000024805UniProtQ86SE9Q3UK78RefSeq mRNA NM 001256549NM 001257101NM 032373NM 029508NM 001368690NM 001368691NM 001368692NM 001368693RefSeq protein NP 001243478NP 001244030NP 115749NP 083784NP 001355619NP 001355620NP 001355621NP 001355622Location UCSC Chr 10 91 16 91 28 MbChr 19 36 33 36 44 MbPubMed search 3 4 WikidataView Edit HumanView Edit MouseReferences edit a b c GRCh38 Ensembl release 89 ENSG00000180628 Ensembl May 2017 a b c GRCm38 Ensembl release 89 ENSMUSG00000024805 Ensembl May 2017 Human PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Mouse PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Matoba R Okubo K Hori N Fukushima A Matsubara K Oct 1994 The addition of 5 coding information to a 3 directed cDNA library improves analysis of gene expression Gene 146 2 199 207 doi 10 1016 0378 1119 94 90293 3 PMID 8076819 Entrez Gene PCGF5 polycomb group ring finger 5 Further reading editHartley JL Temple GF Brasch MA 2001 DNA cloning using in vitro site specific recombination Genome Res 10 11 1788 95 doi 10 1101 gr 143000 PMC 310948 PMID 11076863 Wiemann S Weil B Wellenreuther R et al 2001 Toward a catalog of human genes and proteins sequencing and analysis of 500 novel complete protein coding human cDNAs Genome Res 11 3 422 35 doi 10 1101 gr GR1547R PMC 311072 PMID 11230166 Simpson JC Wellenreuther R Poustka A et al 2001 Systematic subcellular localization of novel proteins identified by large scale cDNA sequencing EMBO Rep 1 3 287 92 doi 10 1093 embo reports kvd058 PMC 1083732 PMID 11256614 Strausberg RL Feingold EA Grouse LH et al 2003 Generation and initial analysis of more than 15 000 full length human and mouse cDNA sequences Proc Natl Acad Sci U S A 99 26 16899 903 Bibcode 2002PNAS 9916899M doi 10 1073 pnas 242603899 PMC 139241 PMID 12477932 Ota T Suzuki Y Nishikawa T et al 2004 Complete sequencing and characterization of 21 243 full length human cDNAs Nat Genet 36 1 40 5 doi 10 1038 ng1285 PMID 14702039 Gerhard DS Wagner L Feingold EA et al 2004 The status quality and expansion of the NIH full length cDNA project the Mammalian Gene Collection MGC Genome Res 14 10B 2121 7 doi 10 1101 gr 2596504 PMC 528928 PMID 15489334 Wiemann S Arlt D Huber W et al 2004 From ORFeome to biology a functional genomics pipeline Genome Res 14 10B 2136 44 doi 10 1101 gr 2576704 PMC 528930 PMID 15489336 Mehrle A Rosenfelder H Schupp I et al 2006 The LIFEdb database in 2006 Nucleic Acids Res 34 Database issue D415 8 doi 10 1093 nar gkj139 PMC 1347501 PMID 16381901 nbsp This article on a gene on human chromosome 10 is a stub You can help Wikipedia by expanding it vte Retrieved from https en wikipedia org w index php title PCGF5 amp oldid 1116601458, wikipedia, wiki, book, books, library,

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