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Coenzyme-B sulfoethylthiotransferase

In enzymology, coenzyme-B sulfoethylthiotransferase, also known as methyl-coenzyme M reductase (MCR) or most systematically as 2-(methylthio)ethanesulfonate:N-(7-thioheptanoyl)-3-O-phosphothreonine S-(2-sulfoethyl)thiotransferase is an enzyme that catalyzes the final step in the formation of methane.[1] It does so by combining the hydrogen donor coenzyme B and the methyl donor coenzyme M. Via this enzyme, most of the natural gas on earth was produced. Ruminants (e.g. cows) produce methane because their rumens contain methanogenic prokaryotes (Archaea)[2][3] that encode and express the set of genes of this enzymatic complex.

coenzyme-B sulfoethylthiotransferase
Identifiers
EC no.2.8.4.1
Databases
IntEnzIntEnz view
BRENDABRENDA entry
ExPASyNiceZyme view
KEGGKEGG entry
MetaCycmetabolic pathway
PRIAMprofile
PDB structuresRCSB PDB PDBe PDBsum
Gene OntologyAmiGO / QuickGO
Search
PMCarticles
PubMedarticles
NCBIproteins

The enzyme has two active sites, each occupied by the nickel-containing F430 cofactor.[4]

methyl-CoM2-(methylthio)ethanesulfonate + coenzyme BN-(7-mercaptoheptanoyl)threonine 3-O-phosphate ⇌ CoM-S-S-CoB + methane
Structure of 2-mercaptoethanesulfonate (coenzyme M: reacts after methylation on the thiol)
Structure of N-(7-mercaptoheptanoyl)threonine 3-O-phosphate (coenzyme B)

The two substrates of this enzyme are 2-(methylthio)ethanesulfonate and N-(7-mercaptoheptanoyl)threonine 3-O-phosphate; its two products are CoM-S-S-CoB and methane. 3-Nitrooxypropanol inhibits the enzyme.[5]

In some species, the enzyme reacts in reverse (a process called reverse methanogenesis), catalysing the anaerobic oxidation of methane, therefore removing it from the environment.[6] Such organisms are methanotrophs.

This enzyme belongs to the family of transferases, specifically those transferring alkylthio groups.

This enzyme participates in folate biosynthesis.[citation needed]

Structure edit

Coenzyme-B sulfoethylthiotransferase is a multiprotein complex made up of a pair of identical halves. Each half is made up of three subunits: α, β and γ,[7] also called McrA, McrB and McrG, respectively.

References edit

  1. ^ Stephen W., Ragdale (2014). "Chapter 6. Biochemistry of Methyl-Coenzyme M Reductase: The Nickel Metalloenzyme that Catalyzes the Final Step in Synthesis and the First Step in Anaerobic Oxidation of the Greenhouse Gas Methane". In Peter M.H. Kroneck and Martha E. Sosa Torres (ed.). The Metal-Driven Biogeochemistry of Gaseous Compounds in the Environment. Metal Ions in Life Sciences. Vol. 14. Springer. pp. 125–145. doi:10.1007/978-94-017-9269-1_6. PMID 25416393.
  2. ^ "Bovine Rumen - microbewiki".
  3. ^ Whitford MF, Teather RM, Forster RJ (2001). "Phylogenetic analysis of methanogens from the bovine rumen". BMC Microbiology. 1: 5. doi:10.1186/1471-2180-1-5. PMC 32158. PMID 11384509.
  4. ^ Thauer RK (September 1998). "Biochemistry of methanogenesis: a tribute to Marjory Stephenson. 1998 Marjory Stephenson Prize Lecture". Microbiology. 144 (9): 2377–406. doi:10.1099/00221287-144-9-2377. PMID 9782487.
  5. ^ Hristov AN, Oh J, Giallongo F, Frederick TW, Harper MT, Weeks HL, Branco AF, Moate PJ, Deighton MH, Williams SR, Kindermann M, Duval S (August 2015). "An inhibitor persistently decreased enteric methane emission from dairy cows with no negative effect on milk production". Proceedings of the National Academy of Sciences of the United States of America. 112 (34): 10663–8. Bibcode:2015PNAS..11210663H. doi:10.1073/pnas.1504124112. PMC 4553761. PMID 26229078.
  6. ^ Hallam SJ, Putnam N, Preston CM, Detter JC, Rokhsar D, Richardson PM, DeLong EF (September 2004). "Reverse methanogenesis: testing the hypothesis with environmental genomics". Science. 305 (5689): 1457–62. Bibcode:2004Sci...305.1457H. doi:10.1126/science.1100025. PMID 15353801. S2CID 31107045.
  7. ^ Ermler U, Grabarse W, Shima S, Goubeaud M, Thauer RK (November 1997). "Crystal structure of methyl-coenzyme M reductase: the key enzyme of biological methane formation". Science. 278 (5342): 1457–62. Bibcode:1997Sci...278.1457E. doi:10.1126/science.278.5342.1457. PMID 9367957.

Further reading edit

  • Bobik TA, Olson KD, Noll KM, Wolfe RS (December 1987). "Evidence that the heterodisulfide of coenzyme M and 7-mercaptoheptanoylthreonine phosphate is a product of the methylreductase reaction in Methanobacterium". Biochemical and Biophysical Research Communications. 149 (2): 455–60. doi:10.1016/0006-291X(87)90389-5. PMID 3122735.
  • Ellermann J, Rospert S, Thauer RK, Bokranz M, Klein A, Voges M, Berkessel A (September 1989). "Methyl-coenzyme-M reductase from Methanobacterium thermoautotrophicum (strain Marburg). Purity, activity and novel inhibitors". European Journal of Biochemistry. 184 (1): 63–8. doi:10.1111/j.1432-1033.1989.tb14990.x. PMID 2506016.
  • Signor L, Knuppe C, Hug R, Schweizer B, Pfaltz A, Jaun B (October 2000). "Methane formation by reaction of a methyl thioether with a photo-excited nickel thiolate--a process mimicking methanogenesis in archaea". Chemistry: A European Journal. 6 (19): 3508–16. doi:10.1002/1521-3765(20001002)6:19<3508::AID-CHEM3508>3.3.CO;2-N. PMID 11072815.


coenzyme, sulfoethylthiotransferase, enzymology, coenzyme, sulfoethylthiotransferase, also, known, methyl, coenzyme, reductase, most, systematically, methylthio, ethanesulfonate, thioheptanoyl, phosphothreonine, sulfoethyl, thiotransferase, enzyme, that, catal. In enzymology coenzyme B sulfoethylthiotransferase also known as methyl coenzyme M reductase MCR or most systematically as 2 methylthio ethanesulfonate N 7 thioheptanoyl 3 O phosphothreonine S 2 sulfoethyl thiotransferase is an enzyme that catalyzes the final step in the formation of methane 1 It does so by combining the hydrogen donor coenzyme B and the methyl donor coenzyme M Via this enzyme most of the natural gas on earth was produced Ruminants e g cows produce methane because their rumens contain methanogenic prokaryotes Archaea 2 3 that encode and express the set of genes of this enzymatic complex coenzyme B sulfoethylthiotransferaseIdentifiersEC no 2 8 4 1DatabasesIntEnzIntEnz viewBRENDABRENDA entryExPASyNiceZyme viewKEGGKEGG entryMetaCycmetabolic pathwayPRIAMprofilePDB structuresRCSB PDB PDBe PDBsumGene OntologyAmiGO QuickGOSearchPMCarticlesPubMedarticlesNCBIproteinsThe enzyme has two active sites each occupied by the nickel containing F430 cofactor 4 methyl CoM 2 methylthio ethanesulfonate coenzyme B N 7 mercaptoheptanoyl threonine 3 O phosphate CoM S S CoB methaneStructure of 2 mercaptoethanesulfonate coenzyme M reacts after methylation on the thiol Structure of N 7 mercaptoheptanoyl threonine 3 O phosphate coenzyme B The two substrates of this enzyme are 2 methylthio ethanesulfonate and N 7 mercaptoheptanoyl threonine 3 O phosphate its two products are CoM S S CoB and methane 3 Nitrooxypropanol inhibits the enzyme 5 In some species the enzyme reacts in reverse a process called reverse methanogenesis catalysing the anaerobic oxidation of methane therefore removing it from the environment 6 Such organisms are methanotrophs This enzyme belongs to the family of transferases specifically those transferring alkylthio groups This enzyme participates in folate biosynthesis citation needed Structure editCoenzyme B sulfoethylthiotransferase is a multiprotein complex made up of a pair of identical halves Each half is made up of three subunits a b and g 7 also called McrA McrB and McrG respectively References edit Stephen W Ragdale 2014 Chapter 6 Biochemistry of Methyl Coenzyme M Reductase The Nickel Metalloenzyme that Catalyzes the Final Step in Synthesis and the First Step in Anaerobic Oxidation of the Greenhouse Gas Methane In Peter M H Kroneck and Martha E Sosa Torres ed The Metal Driven Biogeochemistry of Gaseous Compounds in the Environment Metal Ions in Life Sciences Vol 14 Springer pp 125 145 doi 10 1007 978 94 017 9269 1 6 PMID 25416393 Bovine Rumen microbewiki Whitford MF Teather RM Forster RJ 2001 Phylogenetic analysis of methanogens from the bovine rumen BMC Microbiology 1 5 doi 10 1186 1471 2180 1 5 PMC 32158 PMID 11384509 Thauer RK September 1998 Biochemistry of methanogenesis a tribute to Marjory Stephenson 1998 Marjory Stephenson Prize Lecture Microbiology 144 9 2377 406 doi 10 1099 00221287 144 9 2377 PMID 9782487 Hristov AN Oh J Giallongo F Frederick TW Harper MT Weeks HL Branco AF Moate PJ Deighton MH Williams SR Kindermann M Duval S August 2015 An inhibitor persistently decreased enteric methane emission from dairy cows with no negative effect on milk production Proceedings of the National Academy of Sciences of the United States of America 112 34 10663 8 Bibcode 2015PNAS 11210663H doi 10 1073 pnas 1504124112 PMC 4553761 PMID 26229078 Hallam SJ Putnam N Preston CM Detter JC Rokhsar D Richardson PM DeLong EF September 2004 Reverse methanogenesis testing the hypothesis with environmental genomics Science 305 5689 1457 62 Bibcode 2004Sci 305 1457H doi 10 1126 science 1100025 PMID 15353801 S2CID 31107045 Ermler U Grabarse W Shima S Goubeaud M Thauer RK November 1997 Crystal structure of methyl coenzyme M reductase the key enzyme of biological methane formation Science 278 5342 1457 62 Bibcode 1997Sci 278 1457E doi 10 1126 science 278 5342 1457 PMID 9367957 Further reading editBobik TA Olson KD Noll KM Wolfe RS December 1987 Evidence that the heterodisulfide of coenzyme M and 7 mercaptoheptanoylthreonine phosphate is a product of the methylreductase reaction in Methanobacterium Biochemical and Biophysical Research Communications 149 2 455 60 doi 10 1016 0006 291X 87 90389 5 PMID 3122735 Ellermann J Rospert S Thauer RK Bokranz M Klein A Voges M Berkessel A September 1989 Methyl coenzyme M reductase from Methanobacterium thermoautotrophicum strain Marburg Purity activity and novel inhibitors European Journal of Biochemistry 184 1 63 8 doi 10 1111 j 1432 1033 1989 tb14990 x PMID 2506016 Signor L Knuppe C Hug R Schweizer B Pfaltz A Jaun B October 2000 Methane formation by reaction of a methyl thioether with a photo excited nickel thiolate a process mimicking methanogenesis in archaea Chemistry A European Journal 6 19 3508 16 doi 10 1002 1521 3765 20001002 6 19 lt 3508 AID CHEM3508 gt 3 3 CO 2 N PMID 11072815 Portal nbsp Biology This EC 2 8 enzyme related article is a stub You can help Wikipedia by expanding it vte Retrieved from https en wikipedia org w index php title Coenzyme B sulfoethylthiotransferase amp oldid 1172343006, wikipedia, wiki, book, books, library,

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