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Langton's loops

Langton's loops are a particular "species" of artificial life in a cellular automaton created in 1984 by Christopher Langton. They consist of a loop of cells containing genetic information, which flows continuously around the loop and out along an "arm" (or pseudopod), which will become the daughter loop. The "genes" instruct it to make three left turns, completing the loop, which then disconnects from its parent.

Langton's Loop, in the starting configuration.

History

In 1952 John von Neumann created the first cellular automaton (CA) with the goal of creating a self-replicating machine.[1] This automaton was necessarily very complex due to its computation- and construction-universality. In 1968 Edgar F. Codd reduced the number of states from 29 in von Neumann's CA to 8 in his.[2] When Christopher Langton did away with the universality condition, he was able to significantly reduce the automaton's complexity. Its self-replicating loops are based on one of the simplest elements in Codd's automaton, the periodic emitter.

Specification

Langton's Loops run in a CA that has 8 states, and uses the von Neumann neighborhood with rotational symmetry. The transition table can be found here: [1].

As with Codd's CA, Langton's Loops consist of sheathed wires. The signals travel passively along the wires until they reach the open ends, when the command they carry is executed.

 
A colony of loops. The ones in the centre are "dead".

Colonies

Because of a particular property of the loops' "pseudopodia", they are unable to reproduce into the space occupied by another loop. Thus, once a loop is surrounded, it is incapable of reproducing, resulting in a coral-like colony with a thin layer of reproducing organisms surrounding a core of inactive "dead" organisms. Unless provided unbounded space, the colony's size will be limited. The maximum population will be asymptotic to  , where A is the total area of the space in cells.

Encoding of the genome

The loops' genetic code is stored as a series of nonzero-zero state pairs. The standard loop's genome is illustrated in the picture at the top, and may be stated as a series of numbered states starting from the T-junction and running clockwise: 70-70-70-70-70-70-40-40. The '70' command advances the end of the wire by one cell, while the '40-40' sequence causes the left turn. State 3 is used as a temporary marker for several stages.

While the roles of states 0,1,2,3,4 and 7 are similar to Codd's CA, the remaining states 5 and 6 are used instead to mediate the loop replication process. After the loop has completed, state 5 travels counter-clockwise along the sheath of the parent loop to the next corner, causing the next arm to be produced in a different direction. State 6 temporarily joins the genome of the daughter loop and initialises the growing arm at the next corner it reaches.

The genome is used a total of six times: once to extend the pseudopod to the desired location, four times to complete the loop, and again to transfer the genome into the daughter loop. Clearly, this is dependent on the fourfold rotational symmetry of the loop; without it, the loop would be incapable of containing the information required to describe it. The same use of symmetry for genome compression is used in many biological viruses, such as the icosahedral adenovirus.

Comparison of related CA loops

CA number of states neighborhood number of cells (typical) replication period (typical) thumbnail
Langton's loops[3] (1984): The original self-reproducing loop. 8 von Neumann 86 151
 
Byl's loop[4] (1989): By removing the inner sheath, Byl reduced the size of the loop. 6 von Neumann 12 25
 
Chou-Reggia loop[5] (1993): A further reduction of the loop by removing all sheaths. 8 von Neumann 5 15
 
Tempesti loop[6] (1995): Tempesti added construction capabilities to his loop, allowing patterns to be written inside the loop after reproduction. 10 Moore 148 304
 
Perrier loop[7] (1996): Perrier added a program stack and an extensible data tape to Langton's loop, allowing it to compute anything computable. 64 von Neumann 158 235
 
SDSR loop[8] (1998): With an extra structure-dissolving state added to Langton's loops, the SDSR loop has a limited lifetime and dissolves at the end of its life cycle. This allows continuous growth and turn-over of generations. 9 von Neumann 86 151
 
Evoloop[9] (1999): An extension of the SDSR loop, Evoloop is capable of interaction with neighboring loops as well as of evolution. Often, the greatest selection pressure in a colony of Evoloops is the competition for space, and natural selection favors the smallest functional loop present. Further studies demonstrated more complexity than originally thought in the Evoloop system.[10] 9 von Neumann 149 363
 
Sexyloop[11] (2007): Sexyloop is a modification of the Evoloop where self-reproducing loops have the capability of sex. With this ability, the loops are capable of transferring genetic material into other loops. This increases diversity in the evolution of new species of loops. 10 von Neumann 149 363
 

See also

References

  1. ^ von Neumann, John; Burks, Arthur W. (1966). . www.walenz.org. Archived from the original (Scanned book online) on 2008-01-05. Retrieved 2008-02-29.
  2. ^ Codd, Edgar F. (1968). Cellular Automata. Academic Press, New York.
  3. ^ C. G. Langton (1984). "Self-reproduction in cellular automata" (PDF). Physica D. 10 (1–2): 135–144. doi:10.1016/0167-2789(84)90256-2. hdl:2027.42/24968.
  4. ^ J. Byl (1989). "Self-Reproduction in small cellular automata". Physica D. 34 (1–2): 295–299. doi:10.1016/0167-2789(89)90242-X.
  5. ^ J. A. Reggia; S. L. Armentrout; H.-H. Chou; Y. Peng (1993). "Simple systems that exhibit self-directed replication". Science. 259 (5099): 1282–1287. doi:10.1126/science.259.5099.1282. PMID 17732248.
  6. ^ G. Tempesti (1995). "A New Self-Reproducing Cellular Automaton Capable of Construction and Computation". Advances in Artificial Life, Proc. 3rd European Conference on Artificial Life. Granada, Spain: Lecture Notes in Artificial Intelligence, 929, Springer Verlag, Berlin. pp. 555–563. CiteSeerX 10.1.1.48.7578.
  7. ^ J.-Y. Perrier; M. Sipper; J. Zahnd (1996). "Toward a viable, self-reproducing universal computer". Physica D. 97 (4): 335–352. CiteSeerX 10.1.1.21.3200. doi:10.1016/0167-2789(96)00091-7.
  8. ^ Sayama, Hiroki (1998). "Introduction of Structural Dissolution into Langton's Self-Reproducing Loop". Artificial Life VI: Proceedings of the Sixth International Conference on Artificial Life. Los Angeles, California: MIT Press. pp. 114–122.
  9. ^ Sayama, Hiroki (1999). "Toward the Realization of an Evolving Ecosystem on Cellular Automata". Proceedings of the Fourth International Symposium on Artificial Life and Robotics (AROB 4th '99). Beppu, Oita, Japan. pp. 254–257. CiteSeerX 10.1.1.40.391.
  10. ^ Chris Salzberg; Hiroki Sayama (2004). "Complex genetic evolution of artificial self-replicators in cellular automata". Complexity. 10 (2): 33–39. doi:10.1002/cplx.20060. Archived from the original on 2013-01-05.
  11. ^ Nicolas Oros; C. L. Nehaniv (2007). "Sexyloop: Self-Reproduction, Evolution and Sex in Cellular Automata". The First IEEE Symposium on Artificial Life (April 1–5, 2007, Hawaii, USA). pp. 130–138. hdl:2299/6711.

External links

  • Video of Chris Langton demonstrating self reproducing loops.
  • of several of the self-replicating loops in a Java applet
  • The Rule Table Repository has the transition tables for many of the CA mentioned above.
  • Golly - supports Langton's Loops along with the Game of Life, and other rulesets.

langton, loops, particular, species, artificial, life, cellular, automaton, created, 1984, christopher, langton, they, consist, loop, cells, containing, genetic, information, which, flows, continuously, around, loop, along, pseudopod, which, will, become, daug. Langton s loops are a particular species of artificial life in a cellular automaton created in 1984 by Christopher Langton They consist of a loop of cells containing genetic information which flows continuously around the loop and out along an arm or pseudopod which will become the daughter loop The genes instruct it to make three left turns completing the loop which then disconnects from its parent Langton s Loop in the starting configuration Contents 1 History 2 Specification 2 1 Colonies 2 2 Encoding of the genome 3 Comparison of related CA loops 4 See also 5 References 6 External linksHistory EditIn 1952 John von Neumann created the first cellular automaton CA with the goal of creating a self replicating machine 1 This automaton was necessarily very complex due to its computation and construction universality In 1968 Edgar F Codd reduced the number of states from 29 in von Neumann s CA to 8 in his 2 When Christopher Langton did away with the universality condition he was able to significantly reduce the automaton s complexity Its self replicating loops are based on one of the simplest elements in Codd s automaton the periodic emitter Specification EditLangton s Loops run in a CA that has 8 states and uses the von Neumann neighborhood with rotational symmetry The transition table can be found here 1 As with Codd s CA Langton s Loops consist of sheathed wires The signals travel passively along the wires until they reach the open ends when the command they carry is executed A colony of loops The ones in the centre are dead Colonies Edit Because of a particular property of the loops pseudopodia they are unable to reproduce into the space occupied by another loop Thus once a loop is surrounded it is incapable of reproducing resulting in a coral like colony with a thin layer of reproducing organisms surrounding a core of inactive dead organisms Unless provided unbounded space the colony s size will be limited The maximum population will be asymptotic to A 121 displaystyle textstyle left lfloor frac A 121 right rfloor where A is the total area of the space in cells Encoding of the genome Edit The loops genetic code is stored as a series of nonzero zero state pairs The standard loop s genome is illustrated in the picture at the top and may be stated as a series of numbered states starting from the T junction and running clockwise 70 70 70 70 70 70 40 40 The 70 command advances the end of the wire by one cell while the 40 40 sequence causes the left turn State 3 is used as a temporary marker for several stages While the roles of states 0 1 2 3 4 and 7 are similar to Codd s CA the remaining states 5 and 6 are used instead to mediate the loop replication process After the loop has completed state 5 travels counter clockwise along the sheath of the parent loop to the next corner causing the next arm to be produced in a different direction State 6 temporarily joins the genome of the daughter loop and initialises the growing arm at the next corner it reaches The genome is used a total of six times once to extend the pseudopod to the desired location four times to complete the loop and again to transfer the genome into the daughter loop Clearly this is dependent on the fourfold rotational symmetry of the loop without it the loop would be incapable of containing the information required to describe it The same use of symmetry for genome compression is used in many biological viruses such as the icosahedral adenovirus Comparison of related CA loops EditCA number of states neighborhood number of cells typical replication period typical thumbnailLangton s loops 3 1984 The original self reproducing loop 8 von Neumann 86 151 Byl s loop 4 1989 By removing the inner sheath Byl reduced the size of the loop 6 von Neumann 12 25 Chou Reggia loop 5 1993 A further reduction of the loop by removing all sheaths 8 von Neumann 5 15 Tempesti loop 6 1995 Tempesti added construction capabilities to his loop allowing patterns to be written inside the loop after reproduction 10 Moore 148 304 Perrier loop 7 1996 Perrier added a program stack and an extensible data tape to Langton s loop allowing it to compute anything computable 64 von Neumann 158 235 SDSR loop 8 1998 With an extra structure dissolving state added to Langton s loops the SDSR loop has a limited lifetime and dissolves at the end of its life cycle This allows continuous growth and turn over of generations 9 von Neumann 86 151 Evoloop 9 1999 An extension of the SDSR loop Evoloop is capable of interaction with neighboring loops as well as of evolution Often the greatest selection pressure in a colony of Evoloops is the competition for space and natural selection favors the smallest functional loop present Further studies demonstrated more complexity than originally thought in the Evoloop system 10 9 von Neumann 149 363 Sexyloop 11 2007 Sexyloop is a modification of the Evoloop where self reproducing loops have the capability of sex With this ability the loops are capable of transferring genetic material into other loops This increases diversity in the evolution of new species of loops 10 von Neumann 149 363 See also EditArtificial life Field of study Cellular automaton Discrete model studied in computer science Christopher Langton American computer scientist Codd s cellular automaton 2D cellular automaton devised by Edgar F Codd in 1968 Conway s Game of Life Two dimensional cellular automaton devised by J H Conway in 1970 Langton s ant Two dimensional Turing machine with emergent behavior von Neumann cellular automaton Cellular automaton used to model universal constructionReferences Edit von Neumann John Burks Arthur W 1966 Theory of Self Reproducing Automata www walenz org Archived from the original Scanned book online on 2008 01 05 Retrieved 2008 02 29 Codd Edgar F 1968 Cellular Automata Academic Press New York C G Langton 1984 Self reproduction in cellular automata PDF Physica D 10 1 2 135 144 doi 10 1016 0167 2789 84 90256 2 hdl 2027 42 24968 J Byl 1989 Self Reproduction in small cellular automata Physica D 34 1 2 295 299 doi 10 1016 0167 2789 89 90242 X J A Reggia S L Armentrout H H Chou Y Peng 1993 Simple systems that exhibit self directed replication Science 259 5099 1282 1287 doi 10 1126 science 259 5099 1282 PMID 17732248 G Tempesti 1995 A New Self Reproducing Cellular Automaton Capable of Construction and Computation Advances in Artificial Life Proc 3rd European Conference on Artificial Life Granada Spain Lecture Notes in Artificial Intelligence 929 Springer Verlag Berlin pp 555 563 CiteSeerX 10 1 1 48 7578 J Y Perrier M Sipper J Zahnd 1996 Toward a viable self reproducing universal computer Physica D 97 4 335 352 CiteSeerX 10 1 1 21 3200 doi 10 1016 0167 2789 96 00091 7 Sayama Hiroki 1998 Introduction of Structural Dissolution into Langton s Self Reproducing Loop Artificial Life VI Proceedings of the Sixth International Conference on Artificial Life Los Angeles California MIT Press pp 114 122 Sayama Hiroki 1999 Toward the Realization of an Evolving Ecosystem on Cellular Automata Proceedings of the Fourth International Symposium on Artificial Life and Robotics AROB 4th 99 Beppu Oita Japan pp 254 257 CiteSeerX 10 1 1 40 391 Chris Salzberg Hiroki Sayama 2004 Complex genetic evolution of artificial self replicators in cellular automata Complexity 10 2 33 39 doi 10 1002 cplx 20060 Archived from the original on 2013 01 05 Nicolas Oros C L Nehaniv 2007 Sexyloop Self Reproduction Evolution and Sex in Cellular Automata The First IEEE Symposium on Artificial Life April 1 5 2007 Hawaii USA pp 130 138 hdl 2299 6711 External links Edit Wikimedia Commons has media related to Self replicating loops Video of Chris Langton demonstrating self reproducing loops visual representation of several of the self replicating loops in a Java applet The Rule Table Repository has the transition tables for many of the CA mentioned above Golly supports Langton s Loops along with the Game of Life and other rulesets Retrieved from https en wikipedia org w index php title Langton 27s loops amp oldid 1073621865, wikipedia, wiki, book, books, library,

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