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Inocybaceae

August 20, 2023

The Inocybaceae are a family of fungi in the order Agaricales, the largest order of mushroom-forming fungi.[1] It is one of the larger families within Agaricales (gilled mushrooms).[2] This family exhibits an ectomycorrhizal ecology.[1][3] Members of this family have a widespread distribution in tropical and temperate areas.[4]

Inocybaceae
Inocybe lanuginosa
Scientific classification
Domain: Eukaryota
Kingdom: Fungi
Division: Basidiomycota
Class: Agaricomycetes
Order: Agaricales
Family: Inocybaceae
Jülich (1981)
Type genus
Inocybe
(Fr.) Fr. (1863)
Genera

Auritella
Inocybe
Inosperma
Mallocybe
Nothocybe
Pseudosperma
Tubariomyces

Taxonomy

The type genus of the Inocybaceae, Inocybe, was originally described by Fries in 1821, as a 'tribe' within a broad mushroom genus, Agaricus.[1] In 1863, Fries elevated Inocybe to generic rank.[1]

Inocybe, had traditionally been placed within the family Cortinariaceae.[5][6] Despite this, Dutch taxonomist Walter Jülich placed the genus in its own family, the Inocybaceae.[7] Later, the Cortinariaceae were shown to be polyphyletic.[8][9] Additionally, phylogenetic analyses of RPB1, RPB2 and nLSU-rDNA regions from a variety of Inocybe and related taxa would support Jülich's recognition of Inocybe at the family level.[10] In their Dictionary of the Fungi, Kirk et al. (2008)[11] did not distinguish between Inocybaceae and Crepidotaceae, but rather merged them into one family they called Inocybaceae. The literature has since then split up the classification given by Kirk et al. (2008)[11] not only into Inocybaceae and Crepidotaceae, but also Tubariaceae[12][13][14] and Chromocyphellaceae.[15]

Inocybaceae has only become an independent family somewhat recently. The family is now split into 7 different clades, all recognized with generic rank: Auritella, Inocybe sensu stricto, Inosperma, Mallocybe, Nothocybe, Pseudosperma, and Tubariomyces[16]. It is estimated that Inocybe (the largest genus within Inocybaceae) contains ca. 1050 species; Pseudosperma with ca. 70 species; Mallocybe with more than 55 species; Inosperma containing 70+ known species; and Auritella, Nothocybe, and Tubariomyces containing an unknown number of species, but estimated to be in rather small numbers.[16]

In a 2019 molecular study, Matheny and colleagues used six gene phylogenetic analyses to determine relationships within the family. They recovered Nothocybe as sister to Inocybe, while members of Inocybe section Rimosae formed a lineage that diverged from the ancestor of the preceding two, and hence reclassified it as a genus Pseudosperma. Another branch gives rise to four lineages - the genus Auritella, what was Inocybe subgenus Mallocybe (now Mallocybe[17]), Tubariomyces, and Inosperma (previously Inocybe subgenus Inosperma).[18]

Distribution

The Inocybaceae are widespread in north temperate regions, but also found in the tropics and the Southern Hemisphere. Members of this family have also been encountered in Africa, Australia, the neotropics, New Zealand, the north temperate zone, the paleotropics, Southeast Asia, South America, and the south temperate zone.[19]

Ecology

Members of Inocybaceae are ectomycorrhizal, which is a specialized form of symbyosis with plants generally thought to be mutually beneficial. It is estimated that they can form mycorrhiza with at least 23 plant families.[18] Most species tend to prefer calcareous to neutrally-rich soils, and are often found at the edges of paths, roads, parks, or other urban habitats.[16] Some authors reinforce that members of this family would generally prefer more calcareous soils and notes that this trait is well conserved.[2]

See also

References

  1. ^ a b c d Matheny, P. Brandon (2009). "A phylogenetic classification of the Inocybaceae" (PDF). McIlvainea. 18 (1): 11–21 – via mycopedia.ch.
  2. ^ a b Ryberg, Martin; Larsson, Ellen; Jacobsson, Stig (2010-05-01). "An evolutionary perspective on morphological and ecological characters in the mushroom family Inocybaceae (Agaricomycotina, Fungi)". Molecular Phylogenetics and Evolution. 55 (2): 431–442. doi:10.1016/j.ympev.2010.02.011. ISSN 1055-7903.
  3. ^ Ryberg, Martin; Nilsson, R. Henrik; Kristiansson, Erik; Töpel, Mats; Jacobsson, Stig; Larsson, Ellen (2008-02-18). "Mining metadata from unidentified ITS sequences in GenBank: A case study in Inocybe (Basidiomycota)". BMC Evolutionary Biology. 8 (1): 50. doi:10.1186/1471-2148-8-50. ISSN 1471-2148. PMC 2275786. PMID 18282272.
  4. ^ Cannon PF, Kirk PM (2007). Fungal Families of the World. Wallingford, UK: CABI. p. 176. ISBN 978-0-85199-827-5.
  5. ^ Singer, Rolf (1986). The Agaricales in Modern Taxonomy. Koenigstein, Germany: Koeltz Scientific Books. ISBN 978-3-87429-254-2.
  6. ^ Bisby, Guy Richard; Ainsworth, G. C.; Kirk, P. M.; Aptroot, André (2001). Ainsworth & Bisby's Dictionary of the Fungi / by P. M. Kirk... [et al.]; with the assistance of A. Aptroot... [et al.] Oxon, UK: CAB International. p. 255. ISBN 978-0-85199-377-5.
  7. ^ Jülich W. (1982). Higher taxa of Basidiomycetes. Bibliotheca Mycologia 85. Cramer, Vaduz. 485 pp.
  8. ^ Moncalvo JM, Lutzoni FM, Rehner SA, Johnson J, Vilgalys R (2000). "Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences". Systematic Biology. 49 (2): 278–305. doi:10.1093/sysbio/49.2.278. PMID 12118409.
  9. ^ Moncalvo JM, Vilgalys R, Redhead SA, Johnson JE, James TY, Catherine Aime M, Hofstetter V, Verduin SJ, Larsson E, Baroni TJ, Greg Thorn R, Jacobsson S, Clémençon H, Miller OK (2002). "One hundred and seventeen clades of euagarics". Molecular Phylogenetics and Evolution. 23 (3): 357–400. doi:10.1016/S1055-7903(02)00027-1. PMID 12099793.
  10. ^ Matheny PB (2005). "Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales)". Molecular Phylogenetics and Evolution. 35 (1): 1–20. doi:10.1016/j.ympev.2004.11.014. PMID 15737578.
  11. ^ a b Kirk PM, Cannon PF, Minter DW, Stalpers JA (2008). Dictionary of the Fungi (10th ed.). Wallingford, UK: CAB International. p. 340. ISBN 978-0-85199-826-8.
  12. ^ Vizzini A (2008). "Novitates. Tubariaceae fam. nov". Rivista di Micologia. 51: 174.
  13. ^ Matheny PB, Curtis JM, Hofstetter V, Aime MC, Moncalvo JM, Ge ZW, Tang ZL, Slot JC, Ammirati JF, Baroni TJ, Bougher NL, Hughes KW, Lodge DJ, Kerrigan RW, Seidl MT, Aanen DK, DeNitis M, Daniele GM, Desjardin DE, Kropp BR, Norvell LL, Parker A, Vellinga EC, Vilgalys R, Hibbett DS (2006). "Major clades of Agaricales: a multilocus phylogenetic overview". Mycologia. 98 (6): 982–995. doi:10.3852/mycologia.98.6.982. PMID 17486974.[permanent dead link]
  14. ^ Matheny PB, Moreau PA, Vizzini A, Harrower E, De Haan A, Contu M, Curti M (2015). "Crassisporium and Romagnesiella: two new genera of dark-spored Agaricales" (PDF). Systematics and Biodiversity. 13 (1): 28–41. doi:10.1080/14772000.2014.967823. hdl:2318/152675. S2CID 53694501.
  15. ^ Petersen G, Knudsen H, Seberg O (2010). "Alignment, clade robustness and fungal phylogenetics — Crepidotaceae and sister families revisited". Cladistics. 26 (1): 62–71. doi:10.1111/j.1096-0031.2009.00279.x. PMID 34875756. S2CID 84495351.
  16. ^ a b c CSIZMÁR, M.; CSEH, P.; DIMA, B.; ASSAMERE, A.; ORLÓCI, L.; BRATEK, Z. (2023). "CONTRIBUTION TO THE TAXONOMIC KNOWLEDGE OF THE FAMILY INOCYBACEAE IN BUDAPEST, HUNGARY". Applied Ecology and Environmental Research. 21 (1): 409–420. doi:10.15666/aeer/2101_409420. ISSN 1589-1623.
  17. ^ Hu, Jian-Hua; Yu, Wen-Jie; Deng, Lun-Sha; Fan, Yu-Guang; Bau, Tolgor; Tang, Li-Ping; Lin, Wen-Fei; Deng, Chun-Ying (2023-01-27). "The detection of major clades and new species of Mallocybe (Inocybaceae, Agaricales) from China with elongate cheilocystidia". Mycological Progress. 22 (2): 15. doi:10.1007/s11557-022-01854-5. ISSN 1861-8952.
  18. ^ a b Matheny, P. Brandon; Hobbs, Alicia M.; Esteve-Raventós, Fernando (2020). "Genera of Inocybaceae: New skin for the old ceremony". Mycologia. 112 (1): 83–120. doi:10.1080/00275514.2019.1668906. PMID 31846596. S2CID 209407151.
  19. ^ Matheny, P. Brandon; Aime, M. Catherine; Bougher, Neale L.; Buyck, Bart; Desjardin, Dennis E.; Horak, Egon; Kropp, Bradley R.; Lodge, D. Jean; Soytong, Kasem; Trappe, James M.; Hibbett, David S. (11 March 2009). "Out of the Palaeotropics? Historical biogeography and diversification of the cosmopolitan ectomycorrhizal mushroom family Inocybaceae". Journal of Biogeography. 36 (4): 577–592 – via Wiley.

August 20, 2023
inocybaceae, family, fungi, order, agaricales, largest, order, mushroom, forming, fungi, larger, families, within, agaricales, gilled, mushrooms, this, family, exhibits, ectomycorrhizal, ecology, members, this, family, have, widespread, distribution, tropical,. The Inocybaceae are a family of fungi in the order Agaricales the largest order of mushroom forming fungi 1 It is one of the larger families within Agaricales gilled mushrooms 2 This family exhibits an ectomycorrhizal ecology 1 3 Members of this family have a widespread distribution in tropical and temperate areas 4 InocybaceaeInocybe lanuginosaScientific classificationDomain EukaryotaKingdom FungiDivision BasidiomycotaClass AgaricomycetesOrder AgaricalesFamily InocybaceaeJulich 1981 Type genusInocybe Fr Fr 1863 GeneraAuritellaInocybeInospermaMallocybeNothocybePseudospermaTubariomyces Contents 1 Taxonomy 2 Distribution 3 Ecology 4 See also 5 ReferencesTaxonomy EditThe type genus of the Inocybaceae Inocybe was originally described by Fries in 1821 as a tribe within a broad mushroom genus Agaricus 1 In 1863 Fries elevated Inocybe to generic rank 1 Inocybe had traditionally been placed within the family Cortinariaceae 5 6 Despite this Dutch taxonomist Walter Julich placed the genus in its own family the Inocybaceae 7 Later the Cortinariaceae were shown to be polyphyletic 8 9 Additionally phylogenetic analyses of RPB1 RPB2 and nLSU rDNA regions from a variety of Inocybe and related taxa would support Julich s recognition of Inocybe at the family level 10 In their Dictionary of the Fungi Kirk et al 2008 11 did not distinguish between Inocybaceae and Crepidotaceae but rather merged them into one family they called Inocybaceae The literature has since then split up the classification given by Kirk et al 2008 11 not only into Inocybaceae and Crepidotaceae but also Tubariaceae 12 13 14 and Chromocyphellaceae 15 Inocybaceae has only become an independent family somewhat recently The family is now split into 7 different clades all recognized with generic rank Auritella Inocybe sensu stricto Inosperma Mallocybe Nothocybe Pseudosperma and Tubariomyces 16 It is estimated that Inocybe the largest genus within Inocybaceae contains ca 1050 species Pseudosperma with ca 70 species Mallocybe with more than 55 species Inosperma containing 70 known species and Auritella Nothocybe and Tubariomyces containing an unknown number of species but estimated to be in rather small numbers 16 In a 2019 molecular study Matheny and colleagues used six gene phylogenetic analyses to determine relationships within the family They recovered Nothocybe as sister to Inocybe while members of Inocybe section Rimosae formed a lineage that diverged from the ancestor of the preceding two and hence reclassified it as a genus Pseudosperma Another branch gives rise to four lineages the genus Auritella what was Inocybe subgenus Mallocybe now Mallocybe 17 Tubariomyces and Inosperma previously Inocybe subgenus Inosperma 18 Distribution EditThe Inocybaceae are widespread in north temperate regions but also found in the tropics and the Southern Hemisphere Members of this family have also been encountered in Africa Australia the neotropics New Zealand the north temperate zone the paleotropics Southeast Asia South America and the south temperate zone 19 Ecology EditMembers of Inocybaceae are ectomycorrhizal which is a specialized form of symbyosis with plants generally thought to be mutually beneficial It is estimated that they can form mycorrhiza with at least 23 plant families 18 Most species tend to prefer calcareous to neutrally rich soils and are often found at the edges of paths roads parks or other urban habitats 16 Some authors reinforce that members of this family would generally prefer more calcareous soils and notes that this trait is well conserved 2 See also EditList of Agaricales families List of Inocybe speciesReferences Edit a b c d Matheny P Brandon 2009 A phylogenetic classification of the Inocybaceae PDF McIlvainea 18 1 11 21 via mycopedia ch a b Ryberg Martin Larsson Ellen Jacobsson Stig 2010 05 01 An evolutionary perspective on morphological and ecological characters in the mushroom family Inocybaceae Agaricomycotina Fungi Molecular Phylogenetics and Evolution 55 2 431 442 doi 10 1016 j ympev 2010 02 011 ISSN 1055 7903 Ryberg Martin Nilsson R Henrik Kristiansson Erik Topel Mats Jacobsson Stig Larsson Ellen 2008 02 18 Mining metadata from unidentified ITS sequences in GenBank A case study in Inocybe Basidiomycota BMC Evolutionary Biology 8 1 50 doi 10 1186 1471 2148 8 50 ISSN 1471 2148 PMC 2275786 PMID 18282272 Cannon PF Kirk PM 2007 Fungal Families of the World Wallingford UK CABI p 176 ISBN 978 0 85199 827 5 Singer Rolf 1986 The Agaricales in Modern Taxonomy Koenigstein Germany Koeltz Scientific Books ISBN 978 3 87429 254 2 Bisby Guy Richard Ainsworth G C Kirk P M Aptroot Andre 2001 Ainsworth amp Bisby s Dictionary of the Fungi by P M Kirk et al with the assistance of A Aptroot et al Oxon UK CAB International p 255 ISBN 978 0 85199 377 5 Julich W 1982 Higher taxa of Basidiomycetes Bibliotheca Mycologia 85 Cramer Vaduz 485 pp Moncalvo JM Lutzoni FM Rehner SA Johnson J Vilgalys R 2000 Phylogenetic relationships of agaric fungi based on nuclear large subunit ribosomal DNA sequences Systematic Biology 49 2 278 305 doi 10 1093 sysbio 49 2 278 PMID 12118409 Moncalvo JM Vilgalys R Redhead SA Johnson JE James TY Catherine Aime M Hofstetter V Verduin SJ Larsson E Baroni TJ Greg Thorn R Jacobsson S Clemencon H Miller OK 2002 One hundred and seventeen clades of euagarics Molecular Phylogenetics and Evolution 23 3 357 400 doi 10 1016 S1055 7903 02 00027 1 PMID 12099793 Matheny PB 2005 Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences Inocybe Agaricales Molecular Phylogenetics and Evolution 35 1 1 20 doi 10 1016 j ympev 2004 11 014 PMID 15737578 a b Kirk PM Cannon PF Minter DW Stalpers JA 2008 Dictionary of the Fungi 10th ed Wallingford UK CAB International p 340 ISBN 978 0 85199 826 8 Vizzini A 2008 Novitates Tubariaceae fam nov Rivista di Micologia 51 174 Matheny PB Curtis JM Hofstetter V Aime MC Moncalvo JM Ge ZW Tang ZL Slot JC Ammirati JF Baroni TJ Bougher NL Hughes KW Lodge DJ Kerrigan RW Seidl MT Aanen DK DeNitis M Daniele GM Desjardin DE Kropp BR Norvell LL Parker A Vellinga EC Vilgalys R Hibbett DS 2006 Major clades of Agaricales a multilocus phylogenetic overview Mycologia 98 6 982 995 doi 10 3852 mycologia 98 6 982 PMID 17486974 permanent dead link Matheny PB Moreau PA Vizzini A Harrower E De Haan A Contu M Curti M 2015 Crassisporium and Romagnesiella two new genera of dark spored Agaricales PDF Systematics and Biodiversity 13 1 28 41 doi 10 1080 14772000 2014 967823 hdl 2318 152675 S2CID 53694501 Petersen G Knudsen H Seberg O 2010 Alignment clade robustness and fungal phylogenetics Crepidotaceae and sister families revisited Cladistics 26 1 62 71 doi 10 1111 j 1096 0031 2009 00279 x PMID 34875756 S2CID 84495351 a b c CSIZMAR M CSEH P DIMA B ASSAMERE A ORLoCI L BRATEK Z 2023 CONTRIBUTION TO THE TAXONOMIC KNOWLEDGE OF THE FAMILY INOCYBACEAE IN BUDAPEST HUNGARY Applied Ecology and Environmental Research 21 1 409 420 doi 10 15666 aeer 2101 409420 ISSN 1589 1623 Hu Jian Hua Yu Wen Jie Deng Lun Sha Fan Yu Guang Bau Tolgor Tang Li Ping Lin Wen Fei Deng Chun Ying 2023 01 27 The detection of major clades and new species of Mallocybe Inocybaceae Agaricales from China with elongate cheilocystidia Mycological Progress 22 2 15 doi 10 1007 s11557 022 01854 5 ISSN 1861 8952 a b Matheny P Brandon Hobbs Alicia M Esteve Raventos Fernando 2020 Genera of Inocybaceae New skin for the old ceremony Mycologia 112 1 83 120 doi 10 1080 00275514 2019 1668906 PMID 31846596 S2CID 209407151 Matheny P Brandon Aime M Catherine Bougher Neale L Buyck Bart Desjardin Dennis E Horak Egon Kropp Bradley R Lodge D Jean Soytong Kasem Trappe James M Hibbett David S 11 March 2009 Out of the Palaeotropics Historical biogeography and diversification of the cosmopolitan ectomycorrhizal mushroom family Inocybaceae Journal of Biogeography 36 4 577 592 via Wiley Retrieved from https en wikipedia org w index php title Inocybaceae amp oldid 1171103677, wikipedia, wiki, book, books, 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