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Ganesh Bagler

Ganesh Bagler is known for his research [1][2][3][4][5][6][7][8][9][10] in computational gastronomy, an emerging data science of food, flavors and health.[11][12][13] By blending food with data and computation he has helped establish the foundations of this niche area.[11][12][9][7] Starting with the investigation of food pairing in the Indian cuisine,[14][15][16][17][18][19][20] his lab has contributed to computational gastronomy with studies on culinary fingerprints of world cuisines,[4] culinary evolution,[21][22] benevolent health impacts of spices,[23] and taste prediction algorithms.[3]

Ganesh Bagler
Born (1977-01-31) 31 January 1977 (age 47)
Solapur, Maharashtra, India
Alma mater
Known for
  • Pioneering work in computational gastronomy
  • Science and education
Scientific career
FieldsComputational biology
Institutions
Websitecosylab.iiitd.edu.in

Education edit

Bagler completed his schooling from Sharada School and Siddheshwar High School, Solapur in the western peninsular Indian state of Maharashtra. He did his graduation in Physics (B.Sc., 1997) from Sangameshwar College,[24] Shivaji University and master's studies (M.Sc. Physics, 1999) from Savitribai Phule Pune University, Pune. He moved to University of Hyderabad for M.Tech. in Computational Techniques, before joining Centre for Cellular and Molecular Biology for his Ph.D. research in Computational Biology.[25] His Ph.D. research involved investigation of graph theoretical models of protein structures [26][27] which led to the observation of exceptional assortative mixing in graph theoretical models of protein structures.[28]

Career edit

After the postdoctoral research stint in computational neuroscience at the National Centre for Biological Sciences as a visiting fellow,[29] he joined the Max Planck Institute for Molecular Genetics in Prof. Michael Lappe's (Otto Warburg Laboratory, Bioinformatics/Structural Proteomics) group.[30] He returned to India to join CSIR-Institute of Himalayan Bioresource Technology as a Scientist.[31] In April 2013, he moved to Indian Institute of Technology Jodhpur as an assistant professor.[32][33] After a brief stint at Dhirubhai Ambani Institute of Information and Communication Technology as an assistant professor,[34][35][36] he moved to Indraprastha Institute of Information Technology (IIIT-Delhi) on a tenure track position.[37][38][39][40] There, he is affiliated to the Center for Computational Biology [41] and Department of Computational Biology [42] and has been developing the Computational Gastronomy niche in his lab, the Complex Systems Laboratory.[43]

Research edit

Ganesh Bagler's research [44] has been rooted in investigation of complex systems,[43] primarily of biological origin: protein structure-function,[45] kinetics,[46] folding,[47] and design;[48] complex network models transportation systems;[49] molecular interactome models of complex diseases;[50][51] controllability of biological networks;[52][53] in silico drug discovery;[54][55][56][57][58] systems biological investigation of brain networks;[59][60][61][62] modeling and prediction of phenotypic side effects of drugs;[63][64] computational models of biological systems;[65][66] and computational gastronomy.[1][2][3][4][5][6][7][8][9][10]

Science communication and outreach edit

Ganesh Bagler has keen interest in science, technology, engineering, and mathematics (STEM) education and public outreach for communicating science.[67] He has been engaged in propagating the cause of leveraging computational gastronomy for data-driven food innovations on various platforms:[67] TEDx;[68] HasGeek's Kilter 2017;[69] Discussion Meeting on Mathematical and Statistical Explorations in Disease Modeling and Public Health at the International Centre for Theoretical Sciences;[70] 7th IFCA [71] International Chefs Congress;[72][73] IIT Guwahati Research Conclave 2017;[74] GD Goenka University Le Cordon Bleu India's [75] iHOST 2017;[76] Cadence Advanced Technology Talk;[77] 2nd International Meeting on Systems Medicine (Utrecht, Netherlands);[78] Food Safety and Standards Authority of India's (FSSAI) EatRight Mela;[79] Bangalore Science Forum;[80] and SIAL Paris Conference 2019 [citation needed]. He has organized two editions of Computational Gastronomy Symposiums at IIIT-Delhi.[81][13] He conducts the 'Open Computational Gastronomy' course on Google Classroom [82][83]

Controversy edit

In April 2015, soon after his research reporting the food pairing investigation of Indian cuisine was touted as an emerging technology by the MIT Technology Review,[14] Bagler was unceremoniously removed from the position of assistant professor at the Indian Institute of Technology Jodhpur in a controversial decision.[84] The students protested against the decision of termination.[84][85][86][87][88][89][90]Ministry of Human Resource Development constituted a three-member committee for the investigation of the matter.[91] Subsequently, Bagler moved to Indraprastha Institute of Information Technology on a tenure track position [39] and has graduated his PhD students [92] from Indian Institute of Technology Jodhpur. He has been tenured and promoted to the position of Associate Professor[40] at Indraprastha Institute of Information Technology.

Selected bibliography edit

  • Ganesh Bagler; Somdatta Sinha (2005). "Network Properties of Protein Structures". Physica A. 346 (1–2): 27–33. arXiv:q-bio/0408009. Bibcode:2005PhyA..346...27B. doi:10.1016/j.physa.2004.08.046. S2CID 9539809.
  • Ganesh Bagler; Somdatta Sinha (2007). "Assortative mixing in Protein Contact Networks and protein folding kinetics". Bioinformatics. 23 (14): 1760–1767. arXiv:0711.2723. Bibcode:2007arXiv0711.2723B. doi:10.1093/bioinformatics/btm257. PMID 17519248.
  • Ganesh Bagler (2008). "Analysis of Airport Network of India as a complex weighted network". Physica A. 387 (12): 2972–2980. arXiv:cond-mat/0409773. Bibcode:2008PhyA..387.2972B. doi:10.1016/j.physa.2008.01.077. S2CID 119387720.
  • Arun Kumar; Som Dutt; Ganesh Bagler; Paramvir Singh Ahuja; Sanjay Kumar (2012). "Engineering a thermostable superoxide dismutase functional at sub-zero to >50°C, which also tolerates autoclaving". Scientific Reports. 2: 387. Bibcode:2012NatSR...2E.387K. doi:10.1038/srep00387. PMC 3339387. PMID 22548128.
  • Shivalika Pathania; Vinay Radhawa; Ganesh Bagler (2013). "Prospecting for novel plant-derived molecules of Rauvolfia serpentina as inhibitors of Aldose Reductase, a potent drug target for diabetes and its complications". PLOS ONE. 8 (4): e61327. Bibcode:2013PLoSO...861327P. doi:10.1371/journal.pone.0061327. PMC 3629236. PMID 23613832.
  • Kriti Dubey; Bibin G Anand; Ganesh Bagler; PN Navya; HK Daima; Karunakar Kar (2015). "Tyrosine and tryptophan coated gold nanoparticles inhibit amyloid aggregation of insulin". Amino Acids. 47 (12): 2551–2560. doi:10.1007/s00726-015-2046-6. PMID 26193769. S2CID 15410659.
  • Anupam Jain; NK Rakhi; Ganesh Bagler (2015). "Analysis of food pairing in regional cuisines of India". PLOS ONE. 10 (10): e0139539. arXiv:1505.00890. Bibcode:2015PLoSO..1039539J. doi:10.1371/journal.pone.0139539. PMC 4592201. PMID 26430895.
  • Navjot Singh; Ganesh Bagler (2018). Data-driven investigations of culinary patterns in traditional recipes across the world. 34th International Conference on Data Engineering, Paris (DÉCOR). pp. 157–162. arXiv:1803.04343. doi:10.1109/ICDEW.2018.00033. ISBN 978-1-5386-6306-6.
  • Neelansh Garg; Apurup Sethupathy; Rudraksh Tuwani; Rakhi NK; Shubham Dokania; Arvind Iyer; Ayushi Gupta; Shubhra Agrawal; Navjot Singh; Shubham Shukla; Kriti Kathuria; Rahul Badhwar; Rakesh Kanji; Anupam Jain; Avneet Kaur; Rashmi Nagpal; Ganesh Bagler (2018). "FlavorDB: A database of flavor molecules". Nucleic Acids Research. D1 (D1): D1210–D1216. doi:10.1093/nar/gkx957. PMC 5753196. PMID 29059383.
  • Anupam Jain; Ganesh Bagler (2018). "Culinary evolution models for Indian cuisines". Physica A. 503: 170–176. arXiv:1505.00155. Bibcode:2018PhyA..503..170J. doi:10.1016/j.physa.2018.02.176. S2CID 16910527.
  • Rakhi NK; Rudraksh Tuwani; Jagriti Mukherjee; Ganesh Bagler (2018). "Data-driven analysis of biomedical literature suggests broad-spectrum benevolence of culinary herbs and spices". PLOS ONE. 13 (5): e0198030. Bibcode:2018PLoSO..1398030R. doi:10.1371/journal.pone.0198030. PMC 5973616. PMID 29813110.
  • Vandana Ravindran; Jose C. Nacher; Tatsuya Akutsu; Masayuki Ishitsuka; Adrian Osadcenco; V. Sunitha; Ganesh Bagler; Jean-Marc Schwartz; David L. Robertson (2019). "Network controllability analysis of intracellular signalling reveals viruses are actively controlling molecular systems". Scientific Reports. 9 (1): 2066. Bibcode:2019NatSR...9.2066R. doi:10.1038/s41598-018-38224-9. PMC 6375943. PMID 30765882.
  • Rudraksh Tuwani; Nutan Sahoo; Navjot Singh; Ganesh Bagler (2019). Computational models for the evolution of world cuisines. 35th International Conference on Data Engineering, Macau, China (DÉCOR). pp. 85–90. arXiv:1904.10138. doi:10.1109/icdew.2019.00-30. ISBN 978-1-7281-0890-2.

References edit

  1. ^ a b Jain, Anupam; Rakhi N K; Bagler, Ganesh (2015). "Spices form the basis of food pairing in Indian cuisine". arXiv:1502.03815 [physics.soc-ph].
  2. ^ a b Jain, Anupam; n k, Rakhi; Bagler, Ganesh (2015). "Analysis of Food Pairing in Regional Cuisines of India". PLOS ONE. 10 (10): e0139539. arXiv:1505.00890. Bibcode:2015PLoSO..1039539J. doi:10.1371/journal.pone.0139539. PMC 4592201. PMID 26430895.
  3. ^ a b c Tuwani, Rudraksh; Wadhwa, Somin; Bagler, Ganesh (9 May 2019). "BitterSweet: Building machine learning models for predicting the bitter and sweet taste of small molecules". Scientific Reports. 9 (1): 7155. Bibcode:2019NatSR...9.7155T. doi:10.1038/s41598-019-43664-y. PMC 6509165. PMID 31073241.
  4. ^ a b c Bagler, Ganesh; Singh, Navjot (2018). "Data-Driven Investigations of Culinary Patterns in Traditional Recipes Across the World". 2018 IEEE 34th International Conference on Data Engineering Workshops (ICDEW). pp. 157–162. arXiv:1803.04343. doi:10.1109/ICDEW.2018.00033. ISBN 978-1-5386-6306-6. S2CID 4941349.
  5. ^ a b Garg, Neelansh; Sethupathy, Apuroop; Tuwani, Rudraksh; Nk, Rakhi; Dokania, Shubham; Iyer, Arvind; Gupta, Ayushi; Agrawal, Shubhra; Singh, Navjot; Shukla, Shubham; Kathuria, Kriti; Badhwar, Rahul; Kanji, Rakesh; Jain, Anupam; Kaur, Avneet; Nagpal, Rashmi; Bagler, Ganesh (4 January 2018). "FlavorDB: a database of flavor molecules". Nucleic Acids Research. 46 (D1): D1210–D1216. doi:10.1093/nar/gkx957. PMC 5753196. PMID 29059383.
  6. ^ a b Rakhi, N. K.; Tuwani, Rudraksh; Mukherjee, Jagriti; Bagler, Ganesh (2018). "Data-driven analysis of biomedical literature suggests broad-spectrum benefits of culinary herbs and spices". PLOS ONE. 13 (5): e0198030. Bibcode:2018PLoSO..1398030R. doi:10.1371/journal.pone.0198030. PMC 5973616. PMID 29813110.
  7. ^ a b c "Can A Computer Cook Up The Perfect Recipe?". HuffPost India. 16 December 2018.
  8. ^ a b "Food Scientists Say AI Can Give Ayurveda Scientific Rigor". HuffPost India. 5 January 2019.
  9. ^ a b c "The secret ingredient of Indian food". Hindustan Times. 21 April 2018.
  10. ^ a b "Computational Gastronomy: Leveraging food for better health through... by Ganesh Bagler". YouTube. 8 August 2019. Retrieved 23 February 2020.
  11. ^ a b "Data" (PDF). www.currentscience.ac.in. Retrieved 24 February 2020.
  12. ^ a b Mathew, Sunalini (22 January 2019). "The scoop on computational gastronomy". The Hindu – via www.thehindu.com.
  13. ^ a b "One Day Symposium on Computational Gastronomy". IIIT-Delhi. 17 November 2018.
  14. ^ a b arXiv, Emerging Technology from the. "Data Mining Indian Recipes Reveals New Food Pairing Phenomenon". MIT Technology Review.
  15. ^ FerdmanBioBio, Roberto A. Ferdman closeRoberto A. "Scientists have figured out what makes Indian food so delicious". Washington Post.
  16. ^ S, Rukmini (2 March 2015). "Big Data is changing the way we look at food". The Hindu – via www.thehindu.com.
  17. ^ "This is why Indian food is so delicious... - Times of India". Timesofindia.indiatimes.com. 6 December 2015. Retrieved 23 February 2020.
  18. ^ "Why Indian Food Is So Tasty". Time.
  19. ^ "Researchers Explain Why Indian Cuisine Is Exquisite". NPR.org.
  20. ^ "The tastes of India: Spices give Indian food the edge". The Jakarta Post.
  21. ^ Jain, Anupam; Bagler, Ganesh (1 August 2018). "Culinary evolution models for Indian cuisines". Physica A: Statistical Mechanics and Its Applications. 503: 170–176. arXiv:1505.00155. Bibcode:2018PhyA..503..170J. doi:10.1016/j.physa.2018.02.176. S2CID 16910527.
  22. ^ Tuwani, Rudraksh; Sahoo, Nutan; Singh, Navjot; Bagler, Ganesh (2019). "Computational models for the evolution of world cuisines". arXiv:1904.10138 [physics.soc-ph].
  23. ^ Rakhi, N. K.; Tuwani, Rudraksh; Mukherjee, Jagriti; Bagler, Ganesh (2018). "Data-driven analysis of biomedical literature suggests broad-spectrum benefits of culinary herbs and spices". PLOS ONE. 13 (5): e0198030. Bibcode:2018PLoSO..1398030R. doi:10.1371/journal.pone.0198030. PMC 5973616. PMID 29813110.
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  26. ^ Bagler, Ganesh (2007). "Modeling Protein Contact Networks". arXiv:0711.2616 [q-bio.MN].
  27. ^ Your name here (2010). Complex Network Models of Protein Structures: Structural Correlates of Biophysical Properties (9783843358606): Ganesh Bagler: Books. Lap Lambert Academic Publishing GmbH KG. ISBN 978-3843358606.
  28. ^ Bagler, Ganesh; Sinha, Somdatta (2007). "Assortative mixing in Protein Contact Networks and protein folding kinetics". Bioinformatics. 23 (14): 1760–1767. arXiv:0711.2723. Bibcode:2007arXiv0711.2723B. doi:10.1093/bioinformatics/btm257. PMID 17519248.
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  43. ^ a b "Complex Systems Lab, IIIT-Delhi". Cosylab.iiitd.edu.in. Retrieved 23 February 2020.
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  45. ^ Bagler, Ganesh; Sinha, Somdatta (1 February 2005). "Network properties of protein structures". Physica A: Statistical Mechanics and Its Applications. 346 (1): 27–33. arXiv:q-bio/0408009. Bibcode:2005PhyA..346...27B. doi:10.1016/j.physa.2004.08.046. S2CID 9539809.
  46. ^ Bagler, Ganesh; Sinha, Somdatta (15 July 2007). "Assortative mixing in Protein Contact Networks and protein folding kinetics". Bioinformatics. 23 (14): 1760–1767. arXiv:0711.2723. Bibcode:2007arXiv0711.2723B. doi:10.1093/bioinformatics/btm257. PMID 17519248.
  47. ^ Lappe, Michael; Bagler, Ganesh; Filippis, Ioannis; Stehr, Henning; Duarte, Jose M; Sathyapriya, Rajagopal (1 August 2009). "Designing evolvable libraries using multi-body potentials". Current Opinion in Biotechnology. 20 (4): 437–446. doi:10.1016/j.copbio.2009.07.008. PMID 19713097.
  48. ^ Kumar, Arun; Dutt, Som; Bagler, Ganesh; Ahuja, Paramvir Singh; Kumar, Sanjay (30 April 2012). "Engineering a thermo-stable superoxide dismutase functional at sub-zero to >50°C, which also tolerates autoclaving". Scientific Reports. 2 (1): 387. Bibcode:2012NatSR...2E.387K. doi:10.1038/srep00387. PMC 3339387. PMID 22548128.
  49. ^ Bagler, Ganesh (1 May 2008). "Analysis of the airport network of India as a complex weighted network". Physica A: Statistical Mechanics and Its Applications. 387 (12): 2972–2980. arXiv:cond-mat/0409773. Bibcode:2008PhyA..387.2972B. doi:10.1016/j.physa.2008.01.077. S2CID 119387720.
  50. ^ Vashisht, Shikha; Bagler, Ganesh (2012). "An Approach for the Identification of Targets Specific to Bone Metastasis Using Cancer Genes Interactome and Gene Ontology Analysis". PLOS ONE. 7 (11): e49401. arXiv:1112.1510. Bibcode:2012PLoSO...749401V. doi:10.1371/journal.pone.0049401. PMC 3498148. PMID 23166660.
  51. ^ Randhawa, Vinay; Bagler, Ganesh (2012). "Identification of SRC as a Potent Drug Target for Asthma, Using an Integrative Approach of Protein Interactome Analysis and in Silico Drug Discovery". OMICS: A Journal of Integrative Biology. 16 (10): 513–526. doi:10.1089/omi.2011.0160. PMID 22775150.
  52. ^ Ravindran, Vandana; Nacher, Jose C.; Akutsu, Tatsuya; Ishitsuka, Masayuki; Osadcenco, Adrian; Sunitha, V.; Bagler, Ganesh; Schwartz, Jean-Marc; Robertson, David L. (14 February 2019). "Network controllability analysis of intracellular signalling reveals viruses are actively controlling molecular systems". Scientific Reports. 9 (1): 2066. Bibcode:2019NatSR...9.2066R. doi:10.1038/s41598-018-38224-9. PMC 6375943. PMID 30765882.
  53. ^ Ravindran, Vandana; V., Sunitha; Bagler, Ganesh (15 May 2017). "Identification of critical regulatory genes in cancer signaling network using controllability analysis". Physica A: Statistical Mechanics and Its Applications. 474: 134–143. Bibcode:2017PhyA..474..134R. doi:10.1016/j.physa.2017.01.059.
  54. ^ Pathania, Shivalika; Randhawa, Vinay; Bagler, Ganesh (2013). "Prospecting for Novel Plant-Derived Molecules of Rauvolfia serpentina as Inhibitors of Aldose Reductase, a Potent Drug Target for Diabetes and Its Complications". PLOS ONE. 8 (4): e61327. Bibcode:2013PLoSO...861327P. doi:10.1371/journal.pone.0061327. PMC 3629236. PMID 23613832.
  55. ^ Pathania, Shivalika; Ramakrishnan, Sai Mukund; Randhawa, Vinay; Bagler, Ganesh (2015). "SerpentinaDB: A database of plant-derived molecules of Rauvolfia serpentina". BMC Complementary and Alternative Medicine. 15: 262. doi:10.1186/s12906-015-0683-7. PMC 4523024. PMID 26238452.
  56. ^ Pathania, Shivalika; Ramakrishnan, Sai Mukund; Bagler, Ganesh (2015). "Phytochemica: A platform to explore phytochemicals of medicinal plants". Database. 2015: bav075. doi:10.1093/database/bav075. PMC 4529746. PMID 26255307.
  57. ^ Dubey, Kriti; Anand, Bibin G.; Badhwar, Rahul; Bagler, Ganesh; Navya, P. N.; Daima, Hemant Kumar; Kar, Karunakar (2015). "Tyrosine- and tryptophan-coated gold nanoparticles inhibit amyloid aggregation of insulin". Amino Acids. 47 (12): 2551–2560. doi:10.1007/s00726-015-2046-6. PMID 26193769. S2CID 15410659.
  58. ^ Perumal, Sathiamurthi; Dubey, Kriti; Badhwar, Rahul; George, Kodimattan Joseph; Sharma, Rakesh Kumar; Bagler, Ganesh; Madhan, Balaraman; Kar, Karunakar (2015). "Capsaicin inhibits collagen fibril formation and increases the stability of collagen fibers". European Biophysics Journal. 44 (1–2): 69–76. doi:10.1007/s00249-014-1002-9. PMID 25528374. S2CID 17862960.
  59. ^ Badhwar, Rahul; Bagler, Ganesh (2015). "Control of Neuronal Network in Caenorhabditis elegans". PLOS ONE. 10 (9): e0139204. Bibcode:2015PLoSO..1039204B. doi:10.1371/journal.pone.0139204. PMC 4586142. PMID 26413834.
  60. ^ Badhwar, Rahul; Bagler, Ganesh (1 March 2017). "A distance constrained synaptic plasticity model of C. elegans neuronal network". Physica A: Statistical Mechanics and Its Applications. 469: 313–322. arXiv:1603.03867. Bibcode:2017PhyA..469..313B. doi:10.1016/j.physa.2016.11.055. S2CID 2795267.
  61. ^ Singh, Megha; Badhwar, Rahul; Bagler, Ganesh (2016). "Network biomarkers of schizophrenia by graph theoretical investigations of Brain Functional Networks". arXiv:1602.01191 [q-bio.QM].
  62. ^ Badhwar, Rahul; Bagler, Ganesh (2017). "Robust Sigmoidal Control Response of C. Elegans Neuronal Network". Rough Sets. Lecture Notes in Computer Science. Vol. 10314. pp. 393–402. doi:10.1007/978-3-319-60840-2_29. ISBN 978-3-319-60839-6.
  63. ^ Kanji, Rakesh; Sharma, Abhinav; Bagler, Ganesh (13 October 2015). "Phenotypic side effects prediction by optimizing correlation with chemical and target profiles of drugs". Molecular BioSystems. 11 (11). Pubs.rsc.org: 2900–2906. doi:10.1039/C5MB00312A. PMID 26252576. Retrieved 23 February 2020.
  64. ^ Wadhwa, Somin; Gupta, Aishwarya; Dokania, Shubham; Kanji, Rakesh; Bagler, Ganesh (2018). "A hierarchical anatomical classification schema for prediction of phenotypic side effects". PLOS ONE. 13 (3): e0193959. Bibcode:2018PLoSO..1393959W. doi:10.1371/journal.pone.0193959. PMC 5832387. PMID 29494708.
  65. ^ Yadav, Reena; Ghatge, Mayur; Hiremath, Kirankumar; Bagler, Ganesh (2015). "Numerical study of variable lung ventilation strategies". arXiv:1509.05163 [q-bio.QM].
  66. ^ Vijay, Vivek; Yadav, Sandeep Kumar; Adhikari, Bibhas; Seshadri, Harinipriya; Fulwani, Deepak Kumar (5 January 2015). Systems Thinking Approach for Social Problems: Proceedings of 37th National Systems Conference, December 2013. Springer. ISBN 9788132221418.
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ganesh, bagler, this, article, multiple, issues, please, help, improve, discuss, these, issues, talk, page, learn, when, remove, these, template, messages, some, this, article, listed, sources, reliable, please, help, improve, this, article, looking, better, m. This article has multiple issues Please help improve it or discuss these issues on the talk page Learn how and when to remove these template messages Some of this article s listed sources may not be reliable Please help improve this article by looking for better more reliable sources Unreliable citations may be challenged and removed December 2019 Learn how and when to remove this template message This article may contain an excessive number of citations Please help remove low quality or irrelevant citations February 2022 Learn how and when to remove this template message Learn how and when to remove this template message Ganesh Bagler is known for his research 1 2 3 4 5 6 7 8 9 10 in computational gastronomy an emerging data science of food flavors and health 11 12 13 By blending food with data and computation he has helped establish the foundations of this niche area 11 12 9 7 Starting with the investigation of food pairing in the Indian cuisine 14 15 16 17 18 19 20 his lab has contributed to computational gastronomy with studies on culinary fingerprints of world cuisines 4 culinary evolution 21 22 benevolent health impacts of spices 23 and taste prediction algorithms 3 Ganesh BaglerBorn 1977 01 31 31 January 1977 age 47 Solapur Maharashtra IndiaAlma materSavitribai Phule Pune UniversityUniversity of HyderabadCentre for Cellular and Molecular BiologyNational Centre for Biological SciencesMax Planck Institute for Molecular GeneticsKnown forPioneering work in computational gastronomyScience and educationScientific careerFieldsComputational biologyInstitutionsInstitute of Himalayan Bioresource TechnologyIndian Institute of Technology JodhpurDhirubhai Ambani Institute of Information and Communication TechnologyIndraprastha Institute of Information Technology DelhiWebsitecosylab wbr iiitd wbr edu wbr in Contents 1 Education 2 Career 3 Research 4 Science communication and outreach 5 Controversy 6 Selected bibliography 7 ReferencesEducation editBagler completed his schooling from Sharada School and Siddheshwar High School Solapur in the western peninsular Indian state of Maharashtra He did his graduation in Physics B Sc 1997 from Sangameshwar College 24 Shivaji University and master s studies M Sc Physics 1999 from Savitribai Phule Pune University Pune He moved to University of Hyderabad for M Tech in Computational Techniques before joining Centre for Cellular and Molecular Biology for his Ph D research in Computational Biology 25 His Ph D research involved investigation of graph theoretical models of protein structures 26 27 which led to the observation of exceptional assortative mixing in graph theoretical models of protein structures 28 Career editAfter the postdoctoral research stint in computational neuroscience at the National Centre for Biological Sciences as a visiting fellow 29 he joined the Max Planck Institute for Molecular Genetics in Prof Michael Lappe s Otto Warburg Laboratory Bioinformatics Structural Proteomics group 30 He returned to India to join CSIR Institute of Himalayan Bioresource Technology as a Scientist 31 In April 2013 he moved to Indian Institute of Technology Jodhpur as an assistant professor 32 33 After a brief stint at Dhirubhai Ambani Institute of Information and Communication Technology as an assistant professor 34 35 36 he moved to Indraprastha Institute of Information Technology IIIT Delhi on a tenure track position 37 38 39 40 There he is affiliated to the Center for Computational Biology 41 and Department of Computational Biology 42 and has been developing the Computational Gastronomy niche in his lab the Complex Systems Laboratory 43 Research editGanesh Bagler s research 44 has been rooted in investigation of complex systems 43 primarily of biological origin protein structure function 45 kinetics 46 folding 47 and design 48 complex network models transportation systems 49 molecular interactome models of complex diseases 50 51 controllability of biological networks 52 53 in silico drug discovery 54 55 56 57 58 systems biological investigation of brain networks 59 60 61 62 modeling and prediction of phenotypic side effects of drugs 63 64 computational models of biological systems 65 66 and computational gastronomy 1 2 3 4 5 6 7 8 9 10 Science communication and outreach editGanesh Bagler has keen interest in science technology engineering and mathematics STEM education and public outreach for communicating science 67 He has been engaged in propagating the cause of leveraging computational gastronomy for data driven food innovations on various platforms 67 TEDx 68 HasGeek s Kilter 2017 69 Discussion Meeting on Mathematical and Statistical Explorations in Disease Modeling and Public Health at the International Centre for Theoretical Sciences 70 7th IFCA 71 International Chefs Congress 72 73 IIT Guwahati Research Conclave 2017 74 GD Goenka University Le Cordon Bleu India s 75 iHOST 2017 76 Cadence Advanced Technology Talk 77 2nd International Meeting on Systems Medicine Utrecht Netherlands 78 Food Safety and Standards Authority of India s FSSAI EatRight Mela 79 Bangalore Science Forum 80 and SIAL Paris Conference 2019 citation needed He has organized two editions of Computational Gastronomy Symposiums at IIIT Delhi 81 13 He conducts the Open Computational Gastronomy course on Google Classroom 82 83 Controversy editIn April 2015 soon after his research reporting the food pairing investigation of Indian cuisine was touted as an emerging technology by the MIT Technology Review 14 Bagler was unceremoniously removed from the position of assistant professor at the Indian Institute of Technology Jodhpur in a controversial decision 84 The students protested against the decision of termination 84 85 86 87 88 89 90 Ministry of Human Resource Development constituted a three member committee for the investigation of the matter 91 Subsequently Bagler moved to Indraprastha Institute of Information Technology on a tenure track position 39 and has graduated his PhD students 92 from Indian Institute of Technology Jodhpur He has been tenured and promoted to the position of Associate Professor 40 at Indraprastha Institute of Information Technology Selected bibliography editGanesh Bagler Somdatta Sinha 2005 Network Properties of Protein Structures Physica A 346 1 2 27 33 arXiv q bio 0408009 Bibcode 2005PhyA 346 27B doi 10 1016 j physa 2004 08 046 S2CID 9539809 Ganesh Bagler Somdatta Sinha 2007 Assortative mixing in Protein Contact Networks and protein folding kinetics Bioinformatics 23 14 1760 1767 arXiv 0711 2723 Bibcode 2007arXiv0711 2723B doi 10 1093 bioinformatics btm257 PMID 17519248 Ganesh Bagler 2008 Analysis of Airport Network of India as a complex weighted network Physica A 387 12 2972 2980 arXiv cond mat 0409773 Bibcode 2008PhyA 387 2972B doi 10 1016 j physa 2008 01 077 S2CID 119387720 Arun Kumar Som Dutt Ganesh Bagler Paramvir Singh Ahuja Sanjay Kumar 2012 Engineering a thermostable superoxide dismutase functional at sub zero to gt 50 C which also tolerates autoclaving Scientific Reports 2 387 Bibcode 2012NatSR 2E 387K doi 10 1038 srep00387 PMC 3339387 PMID 22548128 Shivalika Pathania Vinay Radhawa Ganesh Bagler 2013 Prospecting for novel plant derived molecules of Rauvolfia serpentina as inhibitors of Aldose Reductase a potent drug target for diabetes and its complications PLOS ONE 8 4 e61327 Bibcode 2013PLoSO 861327P doi 10 1371 journal pone 0061327 PMC 3629236 PMID 23613832 Kriti Dubey Bibin G Anand Ganesh Bagler PN Navya HK Daima Karunakar Kar 2015 Tyrosine and tryptophan coated gold nanoparticles inhibit amyloid aggregation of insulin Amino Acids 47 12 2551 2560 doi 10 1007 s00726 015 2046 6 PMID 26193769 S2CID 15410659 Anupam Jain NK Rakhi Ganesh Bagler 2015 Analysis of food pairing in regional cuisines of India PLOS ONE 10 10 e0139539 arXiv 1505 00890 Bibcode 2015PLoSO 1039539J doi 10 1371 journal pone 0139539 PMC 4592201 PMID 26430895 Navjot Singh Ganesh Bagler 2018 Data driven investigations of culinary patterns in traditional recipes across the world 34th International Conference on Data Engineering Paris DECOR pp 157 162 arXiv 1803 04343 doi 10 1109 ICDEW 2018 00033 ISBN 978 1 5386 6306 6 Neelansh Garg Apurup Sethupathy Rudraksh Tuwani Rakhi NK Shubham Dokania Arvind Iyer Ayushi Gupta Shubhra Agrawal Navjot Singh Shubham Shukla Kriti Kathuria Rahul Badhwar Rakesh Kanji Anupam Jain Avneet Kaur Rashmi Nagpal Ganesh Bagler 2018 FlavorDB A database of flavor molecules Nucleic Acids Research D1 D1 D1210 D1216 doi 10 1093 nar gkx957 PMC 5753196 PMID 29059383 Anupam Jain Ganesh Bagler 2018 Culinary evolution models for Indian cuisines Physica A 503 170 176 arXiv 1505 00155 Bibcode 2018PhyA 503 170J doi 10 1016 j physa 2018 02 176 S2CID 16910527 Rakhi NK Rudraksh Tuwani Jagriti Mukherjee Ganesh Bagler 2018 Data driven analysis of biomedical literature suggests broad spectrum benevolence of culinary herbs and spices PLOS ONE 13 5 e0198030 Bibcode 2018PLoSO 1398030R doi 10 1371 journal pone 0198030 PMC 5973616 PMID 29813110 Vandana Ravindran Jose C Nacher Tatsuya Akutsu Masayuki Ishitsuka Adrian Osadcenco V Sunitha Ganesh Bagler Jean Marc Schwartz David L Robertson 2019 Network controllability analysis of intracellular signalling reveals viruses are actively controlling molecular systems Scientific Reports 9 1 2066 Bibcode 2019NatSR 9 2066R doi 10 1038 s41598 018 38224 9 PMC 6375943 PMID 30765882 Rudraksh Tuwani Nutan Sahoo Navjot Singh Ganesh Bagler 2019 Computational models for the evolution of world cuisines 35th International Conference on Data Engineering Macau China DECOR pp 85 90 arXiv 1904 10138 doi 10 1109 icdew 2019 00 30 ISBN 978 1 7281 0890 2 References edit a b Jain Anupam Rakhi N K Bagler Ganesh 2015 Spices form the basis of food pairing in Indian cuisine arXiv 1502 03815 physics soc ph a b Jain Anupam n k Rakhi Bagler Ganesh 2015 Analysis of Food Pairing in Regional Cuisines of India PLOS ONE 10 10 e0139539 arXiv 1505 00890 Bibcode 2015PLoSO 1039539J doi 10 1371 journal pone 0139539 PMC 4592201 PMID 26430895 a b c Tuwani Rudraksh Wadhwa Somin Bagler Ganesh 9 May 2019 BitterSweet Building machine learning models for predicting the bitter and sweet taste of small molecules Scientific Reports 9 1 7155 Bibcode 2019NatSR 9 7155T doi 10 1038 s41598 019 43664 y PMC 6509165 PMID 31073241 a b c Bagler Ganesh Singh Navjot 2018 Data Driven Investigations of Culinary Patterns in Traditional Recipes Across the World 2018 IEEE 34th International Conference on Data Engineering Workshops ICDEW pp 157 162 arXiv 1803 04343 doi 10 1109 ICDEW 2018 00033 ISBN 978 1 5386 6306 6 S2CID 4941349 a b Garg Neelansh Sethupathy Apuroop Tuwani Rudraksh Nk Rakhi Dokania Shubham Iyer Arvind Gupta Ayushi Agrawal Shubhra Singh Navjot Shukla Shubham Kathuria Kriti Badhwar Rahul Kanji Rakesh Jain Anupam Kaur Avneet Nagpal Rashmi Bagler Ganesh 4 January 2018 FlavorDB a database of flavor molecules Nucleic Acids Research 46 D1 D1210 D1216 doi 10 1093 nar gkx957 PMC 5753196 PMID 29059383 a b Rakhi N K Tuwani Rudraksh Mukherjee Jagriti Bagler Ganesh 2018 Data driven analysis of biomedical literature suggests broad spectrum benefits of culinary herbs and spices PLOS ONE 13 5 e0198030 Bibcode 2018PLoSO 1398030R doi 10 1371 journal pone 0198030 PMC 5973616 PMID 29813110 a b c Can A Computer Cook Up The Perfect Recipe HuffPost India 16 December 2018 a b Food Scientists Say AI Can Give Ayurveda Scientific Rigor HuffPost India 5 January 2019 a b c The secret ingredient of Indian food Hindustan Times 21 April 2018 a b Computational Gastronomy Leveraging food for better health through by Ganesh Bagler YouTube 8 August 2019 Retrieved 23 February 2020 a b Data PDF www currentscience ac in Retrieved 24 February 2020 a b Mathew Sunalini 22 January 2019 The scoop on computational gastronomy The Hindu via www thehindu com a b One Day Symposium on Computational Gastronomy IIIT Delhi 17 November 2018 a b arXiv Emerging Technology from the Data Mining Indian Recipes Reveals New Food Pairing Phenomenon MIT Technology Review FerdmanBioBio Roberto A Ferdman closeRoberto A Scientists have figured out what makes Indian food so delicious Washington Post S Rukmini 2 March 2015 Big Data is changing the way we look at food The Hindu via www thehindu com This is why Indian food is so delicious Times of India Timesofindia indiatimes com 6 December 2015 Retrieved 23 February 2020 Why Indian Food Is So Tasty Time Researchers Explain Why Indian Cuisine Is Exquisite NPR org The tastes of India Spices give Indian food the edge The Jakarta Post Jain Anupam Bagler Ganesh 1 August 2018 Culinary evolution models for Indian cuisines Physica A Statistical Mechanics and Its Applications 503 170 176 arXiv 1505 00155 Bibcode 2018PhyA 503 170J doi 10 1016 j physa 2018 02 176 S2CID 16910527 Tuwani Rudraksh Sahoo Nutan Singh Navjot Bagler Ganesh 2019 Computational models for the evolution of world cuisines arXiv 1904 10138 physics soc ph Rakhi N K Tuwani Rudraksh Mukherjee Jagriti Bagler Ganesh 2018 Data driven analysis of biomedical literature suggests broad spectrum benefits of culinary herbs and spices PLOS ONE 13 5 e0198030 Bibcode 2018PLoSO 1398030R doi 10 1371 journal pone 0198030 PMC 5973616 PMID 29813110 Sangameshwar College Solapur www sangameshwarcollege ac in https www ccmb res in news ann reports ar2007 08 pdf dead link Bagler Ganesh 2007 Modeling Protein Contact Networks arXiv 0711 2616 q bio MN Your name here 2010 Complex Network Models of Protein Structures Structural Correlates of Biophysical Properties 9783843358606 Ganesh Bagler Books Lap Lambert Academic Publishing GmbH KG ISBN 978 3843358606 Bagler Ganesh Sinha Somdatta 2007 Assortative mixing in Protein Contact Networks and protein folding kinetics Bioinformatics 23 14 1760 1767 arXiv 0711 2723 Bibcode 2007arXiv0711 2723B doi 10 1093 bioinformatics btm257 PMID 17519248 Info PDF www ncbs res in Retrieved 24 February 2020 Ribosome Group PDF Retrieved 23 February 2020 AR 2012 13 FOR PRINT 13 06 13 FINAL pdf PDF Retrieved 23 February 2020 Annual report PDF ir iitj ac in 8080 2013 Retrieved 24 February 2020 Annual report PDF ir iitj ac in 8080 2014 Retrieved 24 February 2020 DAIICT AR 2017 AK 291117 indd PDF Retrieved 23 February 2020 DAIICT AR 1617 indd PDF Retrieved 23 February 2020 NAAC report PDF www daiict ac in 2018 Retrieved 24 February 2020 Annual report PDF www iiitd ac in 2016 Retrieved 24 February 2020 Annual report PDF www iiitd ac in 2017 Retrieved 24 February 2020 a b Faculty Recruitment IIIT Delhi Iiitd ac in Retrieved 23 February 2020 a b Ganesh Bagler IIIT Delhi Iiitd ac in Retrieved 23 February 2020 CCB IIIT Delhi Ccb iiitd ac in 31 March 2017 Retrieved 23 February 2020 Department of Computational Biology IIIT Delhi Cb iiitd ac in Retrieved 23 February 2020 a b Complex Systems Lab IIIT Delhi Cosylab iiitd edu in Retrieved 23 February 2020 Ganesh Bagler Google Scholar Citations Retrieved 23 February 2020 Bagler Ganesh Sinha Somdatta 1 February 2005 Network properties of protein structures Physica A Statistical Mechanics and Its Applications 346 1 27 33 arXiv q bio 0408009 Bibcode 2005PhyA 346 27B doi 10 1016 j physa 2004 08 046 S2CID 9539809 Bagler Ganesh Sinha Somdatta 15 July 2007 Assortative mixing in Protein Contact Networks and protein folding kinetics Bioinformatics 23 14 1760 1767 arXiv 0711 2723 Bibcode 2007arXiv0711 2723B doi 10 1093 bioinformatics btm257 PMID 17519248 Lappe Michael Bagler Ganesh Filippis Ioannis Stehr Henning Duarte Jose M Sathyapriya Rajagopal 1 August 2009 Designing evolvable libraries using multi body potentials Current Opinion in Biotechnology 20 4 437 446 doi 10 1016 j copbio 2009 07 008 PMID 19713097 Kumar Arun Dutt Som Bagler Ganesh Ahuja Paramvir Singh Kumar Sanjay 30 April 2012 Engineering a thermo stable superoxide dismutase functional at sub zero to gt 50 C which also tolerates autoclaving Scientific Reports 2 1 387 Bibcode 2012NatSR 2E 387K doi 10 1038 srep00387 PMC 3339387 PMID 22548128 Bagler Ganesh 1 May 2008 Analysis of the airport network of India as a complex weighted network Physica A Statistical Mechanics and Its Applications 387 12 2972 2980 arXiv cond mat 0409773 Bibcode 2008PhyA 387 2972B doi 10 1016 j physa 2008 01 077 S2CID 119387720 Vashisht Shikha Bagler Ganesh 2012 An Approach for the Identification of Targets Specific to Bone Metastasis Using Cancer Genes Interactome and Gene Ontology Analysis PLOS ONE 7 11 e49401 arXiv 1112 1510 Bibcode 2012PLoSO 749401V doi 10 1371 journal pone 0049401 PMC 3498148 PMID 23166660 Randhawa Vinay Bagler Ganesh 2012 Identification of SRC as a Potent Drug Target for Asthma Using an Integrative Approach of Protein Interactome Analysis and in Silico Drug Discovery OMICS A Journal of Integrative Biology 16 10 513 526 doi 10 1089 omi 2011 0160 PMID 22775150 Ravindran Vandana Nacher Jose C Akutsu Tatsuya Ishitsuka Masayuki Osadcenco Adrian Sunitha V Bagler Ganesh Schwartz Jean Marc Robertson David L 14 February 2019 Network controllability analysis of intracellular signalling reveals viruses are actively controlling molecular systems Scientific Reports 9 1 2066 Bibcode 2019NatSR 9 2066R doi 10 1038 s41598 018 38224 9 PMC 6375943 PMID 30765882 Ravindran Vandana V Sunitha Bagler Ganesh 15 May 2017 Identification of critical regulatory genes in cancer signaling network using controllability analysis Physica A Statistical Mechanics and Its Applications 474 134 143 Bibcode 2017PhyA 474 134R doi 10 1016 j physa 2017 01 059 Pathania Shivalika Randhawa Vinay Bagler Ganesh 2013 Prospecting for Novel Plant Derived Molecules of Rauvolfia serpentina as Inhibitors of Aldose Reductase a Potent Drug Target for Diabetes and Its Complications PLOS ONE 8 4 e61327 Bibcode 2013PLoSO 861327P doi 10 1371 journal pone 0061327 PMC 3629236 PMID 23613832 Pathania Shivalika Ramakrishnan Sai Mukund Randhawa Vinay Bagler Ganesh 2015 SerpentinaDB A database of plant derived molecules of Rauvolfia serpentina BMC Complementary and Alternative Medicine 15 262 doi 10 1186 s12906 015 0683 7 PMC 4523024 PMID 26238452 Pathania Shivalika Ramakrishnan Sai Mukund Bagler Ganesh 2015 Phytochemica A platform to explore phytochemicals of medicinal plants Database 2015 bav075 doi 10 1093 database bav075 PMC 4529746 PMID 26255307 Dubey Kriti Anand Bibin G Badhwar Rahul Bagler Ganesh Navya P N Daima Hemant Kumar Kar Karunakar 2015 Tyrosine and tryptophan coated gold nanoparticles inhibit amyloid aggregation of insulin Amino Acids 47 12 2551 2560 doi 10 1007 s00726 015 2046 6 PMID 26193769 S2CID 15410659 Perumal Sathiamurthi Dubey Kriti Badhwar Rahul George Kodimattan Joseph Sharma Rakesh Kumar Bagler Ganesh Madhan Balaraman Kar Karunakar 2015 Capsaicin inhibits collagen fibril formation and increases the stability of collagen fibers European Biophysics Journal 44 1 2 69 76 doi 10 1007 s00249 014 1002 9 PMID 25528374 S2CID 17862960 Badhwar Rahul Bagler Ganesh 2015 Control of Neuronal Network in Caenorhabditis elegans PLOS ONE 10 9 e0139204 Bibcode 2015PLoSO 1039204B doi 10 1371 journal pone 0139204 PMC 4586142 PMID 26413834 Badhwar Rahul Bagler Ganesh 1 March 2017 A distance constrained synaptic plasticity model of C elegans neuronal network Physica A Statistical Mechanics and Its Applications 469 313 322 arXiv 1603 03867 Bibcode 2017PhyA 469 313B doi 10 1016 j physa 2016 11 055 S2CID 2795267 Singh Megha Badhwar Rahul Bagler Ganesh 2016 Network biomarkers of schizophrenia by graph theoretical investigations of Brain Functional Networks arXiv 1602 01191 q bio QM Badhwar Rahul Bagler Ganesh 2017 Robust Sigmoidal Control Response of C Elegans Neuronal Network Rough Sets Lecture Notes in Computer Science Vol 10314 pp 393 402 doi 10 1007 978 3 319 60840 2 29 ISBN 978 3 319 60839 6 Kanji Rakesh Sharma Abhinav Bagler Ganesh 13 October 2015 Phenotypic side effects prediction by optimizing correlation with chemical and target profiles of drugs Molecular BioSystems 11 11 Pubs rsc org 2900 2906 doi 10 1039 C5MB00312A PMID 26252576 Retrieved 23 February 2020 Wadhwa Somin Gupta Aishwarya Dokania Shubham Kanji Rakesh Bagler Ganesh 2018 A hierarchical anatomical classification schema for prediction of phenotypic side effects PLOS ONE 13 3 e0193959 Bibcode 2018PLoSO 1393959W doi 10 1371 journal pone 0193959 PMC 5832387 PMID 29494708 Yadav Reena Ghatge Mayur Hiremath Kirankumar Bagler Ganesh 2015 Numerical study of variable lung ventilation strategies arXiv 1509 05163 q bio QM Vijay Vivek Yadav Sandeep Kumar Adhikari Bibhas Seshadri Harinipriya Fulwani Deepak Kumar 5 January 2015 Systems Thinking Approach for Social Problems Proceedings of 37th National Systems Conference December 2013 Springer ISBN 9788132221418 a b Outreach Talks Presentations Past members of the lab Ganesh Bagler IIIT Delhi Google My Maps Retrieved 23 February 2020 Data driven approaches to leveraging food for better health Dr Ganesh Bagler TEDxDAIICT YouTube 11 July 2017 Retrieved 23 February 2020 Data driven Food Pairings Ganesh Bagler YouTube Retrieved 23 February 2020 Computational Gastronomy Leveraging food for better health through by Ganesh Bagler YouTube 8 August 2019 Retrieved 23 February 2020 IFCA Official Website The Indian Federation of Culinary Associations IFCA INDIA IFCA s 7th International Chefs Conference Event Arrangement Pics Chef Soundar 14 August 2017 Post 4 September 2017 The Science of Indian Cuisine Slideshare net Retrieved 23 February 2020 http www iitg ac in researchconclave rc18 Downloads RC17 AbstractBook pdf permanent dead link Gurgaon India Le Cordon Bleu www cordonbleu edu Report on iHOST 2017 27 February 2017 Cadence Advanced Technology Talk Can a biologist fix a radio Ganesh Bagler YouTube 11 September 2019 Retrieved 23 February 2020 2018 Utrecht Conference Program easym Easym eu Retrieved 23 February 2020 Report PDF archive fssai gov in 2019 Retrieved 24 February 2020 Handbill PDF bangalorescienceforum in Retrieved 24 February 2020 One Day Symposium on Computational Gastronomy IIIT Delhi 19 February 2018 OPEN Computational Gastronomy Week01 Class01 Ganesh Bagler YouTube Retrieved 23 February 2020 OPEN Computational Gastronomy Week01 Class02 Ganesh Bagler YouTube 9 September 2019 Retrieved 23 February 2020 a b Students want terminator IIT Jodhpur chief to go Times of India The Times of India Why is Smriti Irani giving step motherly treatment to IIT Jodhpur 23 April 2015 An Appeal by the IIT Jodhpur Fraternity YouTube 3 April 2015 Retrieved 23 February 2020 IIT J students demand director s removal The Hindu 5 April 2015 via www thehindu com Press Trust of India 3 April 2015 IIT Jodhpur students urge Prez HRD Minitsry to sack Director Business Standard News Business Standard India Business standard com Retrieved 23 February 2020 These IIT Students Are Waging A Social Media War On Their Director DictatorFreeIITJ Indiatimes com 3 April 2015 Retrieved 23 February 2020 Press Trust of India April 2015 IIT J students protest against faculty termination Business Standard News Business Standard India Business standard com Retrieved 23 February 2020 http 54 254 97 154 locality jodhpur three member panel hrd ministry reaches iit jodhpur 57117 permanent dead link Khamma Ghani PDF iitj ac in 2018 Retrieved 24 February 2020 Retrieved from https en wikipedia org w index php title Ganesh Bagler amp oldid 1172062998, wikipedia, wiki, book, books, library,

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