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Factor X

Factor X, also known by the eponym Stuart–Prower factor, is an enzyme (EC 3.4.21.6) of the coagulation cascade. It is a serine endopeptidase (protease group S1, PA clan). Factor X is synthesized in the liver and requires vitamin K for its synthesis.

F10
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesF10, FX, FXA, coagulation factor X
External IDsOMIM: 613872 MGI: 103107 HomoloGene: 30976 GeneCards: F10
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_000504
NM_001312674
NM_001312675

NM_001242368
NM_007972

RefSeq (protein)

NP_000495
NP_001299603
NP_001299604

NP_001229297
NP_031998

Location (UCSC)Chr 13: 113.12 – 113.15 MbChr 8: 13.09 – 13.11 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Factor X is activated, by hydrolysis, into factor Xa by both factor IX (with its cofactor, factor VIII in a complex known as intrinsic tenase) and factor VII with its cofactor, tissue factor (a complex known as extrinsic tenase). It is therefore the first member of the final common pathway or thrombin pathway.

It acts by cleaving prothrombin in two places (an Arg-Thr and then an Arg-Ile bond), which yields the active thrombin. This process is optimized when factor Xa is complexed with activated co-factor V in the prothrombinase complex.

Factor Xa is inactivated by protein Z-dependent protease inhibitor (ZPI), a serine protease inhibitor (serpin). The affinity of this protein for factor Xa is increased 1000-fold by the presence of protein Z, while it does not require protein Z for inactivation of factor XI. Defects in protein Z lead to increased factor Xa activity and a propensity for thrombosis.

The half life of factor X is 40–45 hours.

Structure edit

The first crystal structure of human factor Xa was deposited in May 1993. To date, 191 crystal structures of factor Xa with various inhibitors have been deposited in the protein data bank. The active site of factor Xa is divided into four subpockets as S1, S2, S3 and S4. The S1 subpocket determines the major component of selectivity and binding. The S2 sub-pocket is small, shallow and not well defined. It merges with the S4 subpocket. The S3 sub-pocket is located on the rim of the S1 pocket and is quite exposed to solvent. The S4 sub-pocket has three ligand binding domains: the "hydrophobic box", the "cationic hole" and the water site. Factor Xa inhibitors generally bind in an L-shaped conformation, where one group of the ligand occupies the anionic S1 pocket lined by residues Asp189, Ser195, and Tyr228, and another group of the ligand occupies the aromatic S4 pocket lined by residues Tyr99, Phe174, and Trp215. Typically, a fairly rigid linker group bridges these two interaction sites.[5]

Genetics edit

The human factor X gene is located on chromosome 13 (13q34).

Role in disease edit

Inborn deficiency of factor X is very rare (1:1,000,000), and may present with epistaxis (nosebleeds), hemarthrosis (bleeding into joints) and gastrointestinal blood loss. Apart from congenital deficiency, low factor X levels may occur occasionally in a number of disease states. For example, factor X deficiency may be seen in amyloidosis, where factor X is adsorbed to the amyloid fibrils in the vasculature.

Deficiency of vitamin K or antagonism by warfarin (or similar medication) leads to the production of an inactive factor X. In warfarin therapy, this is desirable to prevent thrombosis. As of late 2007, four out of five emerging anti-coagulation therapeutics targeted this enzyme.[6]

Inhibiting Factor Xa would offer an alternate method for anticoagulation. Direct Xa inhibitors are popular anticoagulants.

Polymorphisms in Factor X have been associated with an increased prevalence in bacterial infections, suggesting a possible role directly regulating the immune response to bacterial pathogens.[7]

Therapeutic use edit

Factor X is part of fresh frozen plasma and the prothrombinase complex. There are two commercially available Factor X concentrates: "Factor X P Behring" manufactured by CSL Behring,[8] and high purity Factor X Coagadex produced by Bio Products Laboratory and approved for use in the United States by the FDA in October 2015, and in the EU in March 2016, after earlier acceptance by CHMP and COMP.[9][10][11][12]

Kcentra, manufactured by CSL Behring, is a concentrate containing coagulation Factors II, VII, IX and X, and antithrombotic Proteins C and S.[13]

Use in biochemistry edit

The factor Xa protease can be used in biochemistry to cleave off protein tags that improve expression or purification of a protein of interest. Its preferred cleavage site (after the arginine in the sequence Ile-Glu/Asp-Gly-Arg, IEGR or IDGR) can easily be engineered between a tag sequence and the protein of interest. After expression and purification, the tag is then proteolytically removed by factor Xa.

Factor Xa edit

 
Blood coagulation pathways in vivo showing the central role played by thrombin

Factor Xa is the activated form of the coagulation factor X, also known as thrombokinase and known eponymously as Stuart-Prower factor. Factor X is an enzyme, a serine endopeptidase, which plays a key role at several stages of the coagulation system. Factor X is synthesized in the liver. The most commonly used anticoagulants in clinical practice, warfarin and the heparin series of anticoagulants and fondaparinux, act to inhibit the action of Factor Xa in various degrees.

Traditional models of coagulation developed in the 1960s envisaged two separate cascades, the extrinsic (tissue factor (TF)) pathway and the intrinsic pathway. These pathways converge to a common point, the formation of the Factor Xa/Va complex which together with calcium and bound on a phospholipids surface, generate thrombin (Factor IIa) from prothrombin (Factor II).

A new model, the cell-based model of anticoagulation appears to explain more fully the steps in coagulation. This model has three stages: 1) initiation of coagulation on TF-bearing cells, 2) amplification of the procoagulant signal by thrombin generated on the TF-bearing cell and 3) propagation of thrombin generation on the platelet surface. Factor Xa plays a key role in all three of these stages.[14]

In stage 1, Factor VII binds to the transmembrane protein TF on the surface of cells and is converted to Factor VIIa. The result is a Factor VIIa/TF complex, which catalyzes the activation of Factor X and Factor IX. Factor Xa formed on the surface of the TF-bearing cell interacts with Factor Va to form the prothrombinase complex which generates small amounts of thrombin on the surface of TF-bearing cells.

In stage 2, the amplification stage, if enough thrombin has been generated, then activation of platelets and platelet-associated cofactors occurs.

In stage 3, thrombin generation, Factor XIa activates free Factor IX on the surface of activated platelets. The activated Factor IXa with Factor VIIIa forms the "tenase" complex. This "tenase" complex activates more Factor X, which in turn forms new prothrombinase complexes with Factor Va. Factor Xa is the prime component of the prothrombinase complex which converts large amounts of prothrombin—the "thrombin burst". Each molecule of Factor Xa can generate 1000 molecules of thrombin. This large burst of thrombin is responsible for fibrin polymerization to form a thrombus.

Factor Xa also plays a role in other biological processes that are not directly related to coagulation, like wound healing, tissue remodelling, inflammation, angiogenesis and atherosclerosis.

Inhibition of the synthesis or activity of Factor X is the mechanism of action for many anticoagulants in use today. Warfarin, a synthetic derivative of coumarin, is the most widely used oral anticoagulant in the US. In some European countries, other coumarin derivatives (phenprocoumon and acenocoumarol) are used. These agents known as vitamin K antagonists (VKA), inhibit the vitamin K-dependent carboxylation of Factors II (prothrombin), VII, IX, X in the hepatocyte. This carboxylation after the translation is essential for the physiological activity.[15]

Heparin (unfractionated heparin) and its derivatives low molecular weight heparin (LMWH) bind to a plasma cofactor, antithrombin (AT) to inactivate several coagulation factors IIa, Xa, XIa and XIIa. The affinity of unfractionated heparin and the various LMWHs for Factor Xa varies considerably. The efficacy of heparin-based anticoagulants increases as selectivity for Factor Xa increases. LMWH shows increased inactivation of Factor Xa compared to unfractionated heparin, and fondaparinux, an agent based on the critical pentasacharide sequence of heparin, shows more selectivity than LMWH. This inactivation of Factor Xa by heparins is termed "indirect" since it relies on the presence of AT and not a direct interaction with Factor Xa.

Recently a new series of specific, direct acting inhibitors of Factor Xa has been developed. These include the drugs rivaroxaban, apixaban, betrixaban, LY517717, darexaban (YM150), edoxaban and 813893. These agents have several theoretical advantages over current therapy. They may be given orally. They have rapid onset of action. And they may be more effective against Factor Xa in that they inhibit both free Factor Xa and Factor Xa in the prothrombinase complex.[16]

History edit

American and British scientists described deficiency of factor X independently in 1953 and 1956, respectively. As with some other coagulation factors, the factor was initially named after these patients, a Mr Rufus Stuart (1921) and a Miss Audrey Prower (1934). At that time, those investigators could not know that the human genetic defect they had identified would be found in the previously characterized enzyme called thrombokinase.

Thrombokinase was the name coined by Paul Morawitz in 1904 to describe the substance that converted prothrombin to thrombin and caused blood to clot.[17] That name embodied an important new concept in understanding blood coagulation – that an enzyme was critically important in the activation of prothrombin. Morawitz believed that his enzyme came from cells such as platelets yet, in keeping with the state of knowledge about enzymes at that time, he had no clear idea about the chemical nature of his thrombokinase or its mechanism of action. Those uncertainties led to decades during which the terms thrombokinase and thromboplastin were both used to describe the activator of prothrombin and led to controversy about its chemical nature and origin.[18]

In 1947, J Haskell Milstone isolated a proenzyme from bovine plasma which, when activated, converted prothrombin to thrombin. Following Morawitz’s designation, he called it prothrombokinase [19] and by 1951 had purified the active enzyme, thrombokinase. Over the next several years he showed that thrombokinase was a proteolytic enzyme that, by itself, could activate prothrombin. Its activity was greatly enhanced by addition of calcium, other serum factors, and tissue extracts,[20] which represented the thromboplastins that promoted the conversion of prothrombin to thrombin by their interaction with thrombokinase. In 1964 Milstone summarized his work and that of others: “There are many chemical reactions which are so slow that they would not be of physiological use if they were not accelerated by enzymes. We are now confronted with a reaction, catalyzed by an enzyme, which is still too slow unless aided by accessory factors.” [21]

Interactions edit

Factor X has been shown to interact with Tissue factor pathway inhibitor.[22]

References edit

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000126218 - Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000031444 - Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ . Archived from the original on 2016-03-03. Retrieved 2010-04-08.
  6. ^ Ron Winslow, Avery Johnson (2007-12-10). "Race Is on for the Next Blood Thinner". The Wall Street Journal. p. A12. from the original on 2016-03-10. Retrieved 2008-01-06. The flurry of interest reflects increasing understanding of what doctors call the coagulation cascade... Four new blood thinners target an enzyme called factor Xa, one of several enzymes that play an important role in the cascade.
  7. ^ Skaar EP, Pulley J, Jerome RN, Pruijssers A, Shirey-Rice JK, Margaritis P, Himmel LE, Monteith AJ, Choby JE (2019-02-19). "PheWAS uncovers a pathological role of coagulation Factor X during Acinetobacter baumannii infection". Infection and Immunity. 87 (5): IAI.00031–19. doi:10.1128/IAI.00031-19. ISSN 0019-9567. PMC 6479028. PMID 30782860.
  8. ^ Mark Brooker (2008): "Registry of Clotting Factor Concentrates". Eighth Edition, 2008, World Federation of Hemophilia
  9. ^ (Press release). US FDA. October 20, 2015. Archived from the original on October 21, 2015. Retrieved October 21, 2015. Until today's orphan drug approval, no specific coagulation factor replacement therapy was available for patients with hereditary Factor X deficiency.
  10. ^ "Coagadex". U.S. Food and Drug Administration. 28 June 2017. Archived from the original on 22 July 2017. Retrieved 2 April 2020.{{cite web}}: CS1 maint: unfit URL (link)
  11. ^ "Coagadex". U.S. Food and Drug Administration. 21 September 2018. from the original on 17 December 2019. Retrieved 2 April 2020.
  12. ^ "Coagadex EPAR". European Medicines Agency (EMA). 17 September 2018. from the original on 30 December 2019. Retrieved 21 April 2020.
  13. ^ "Kcentra- prothrombin, coagulation factor vii human, coagulation factor ix human, coagulation factor x human, protein c, protein s human, and water kit". DailyMed. 22 October 2018. from the original on 25 March 2021. Retrieved 21 April 2020.
  14. ^ Hoffman M, Monroe DM (February 2007). "Coagulation 2006: a modern view of hemostasis". Hematology/Oncology Clinics of North America. 21 (1): 1–11. doi:10.1016/j.hoc.2006.11.004. PMID 17258114.
  15. ^ Golan DE (2012). Principles of Pharmacology The Pathophysiologic Basis of Drug Therapy. Philadelphia: Lippincott Williams & Wilkins. p. 387. ISBN 978-1-4511-1805-6.
  16. ^ Turpie AG (June 2007). "Oral, direct factor Xa inhibitors in development for the prevention and treatment of thromboembolic diseases". Arteriosclerosis, Thrombosis, and Vascular Biology. 27 (6): 1238–47. CiteSeerX 10.1.1.536.872. doi:10.1161/ATVBAHA.107.139402. PMID 17379841. S2CID 2998452.
  17. ^ Morawitz P. "Beitrage zur Kenntnis der Blutgerinnung". Deutsches Archiv für Klinische Medizin. 79: 432–442.
  18. ^ Milstone JH (1952). "On the evolution of blood clotting theory". Medicine. 31 (4): 411–447. doi:10.1097/00005792-195212000-00004. PMID 13012730.
  19. ^ Milstone JH (1947). "Prothrombokinase and the three stages of blood coagulation". Science. 106 (2762): 546–547. Bibcode:1947Sci...106..546M. doi:10.1126/science.106.2762.546-a. PMID 17741228. S2CID 35643683.
  20. ^ Milstone L (2021). "Factor Xa: Thrombokinase from Paul Morawitz to J Haskell Milstone". Journal Thrombosis and Thrombolysis. 52 (2): 364–370. doi:10.1007/s11239-021-02387-6. PMID 33484373. S2CID 231682954.
  21. ^ Milstone JH (1964). "Thrombokinase as prime activator of prothrombin: historical perspectives and present status". Federation Proceedings. 23 (2): 742–748. doi:10.1085/jgp.47.2.315. PMC 2195336. PMID 14080818.
  22. ^ Broze GJ, Warren LA, Novotny WF, Higuchi DA, Girard JJ, Miletich JP (February 1988). "The lipoprotein-associated coagulation inhibitor that inhibits the factor VII-tissue factor complex also inhibits factor Xa: insight into its possible mechanism of action". Blood. 71 (2): 335–43. doi:10.1182/blood.V71.2.335.335. PMID 3422166.

External links edit

Further reading edit

  • Cooper DN, Millar DS, Wacey A, Pemberton S, Tuddenham EG (July 1997). "Inherited factor X deficiency: molecular genetics and pathophysiology". Thrombosis and Haemostasis. 78 (1): 161–72. doi:10.1055/s-0038-1657520. PMID 9198147. S2CID 27129058.
  • Hassan HJ, Leonardi A, Chelucci C, Mattia G, Macioce G, Guerriero R, Russo G, Mannucci PM, Peschle C (September 1990). "Blood coagulation factors in human embryonic-fetal development: preferential expression of the FVII/tissue factor pathway". Blood. 76 (6): 1158–64. doi:10.1182/blood.V76.6.1158.1158. PMID 1698100.
  • Messier TL, Pittman DD, Long GL, Kaufman RJ, Church WR (March 1991). "Cloning and expression in COS-1 cells of a full-length cDNA encoding human coagulation factor X". Gene. 99 (2): 291–4. doi:10.1016/0378-1119(91)90141-W. PMID 1902434.
  • Krishnaswamy S (March 1990). "Prothrombinase complex assembly. Contributions of protein-protein and protein-membrane interactions toward complex formation". The Journal of Biological Chemistry. 265 (7): 3708–18. doi:10.1016/S0021-9258(19)39652-8. PMID 2303476.
  • España F, Berrettini M, Griffin JH (August 1989). "Purification and characterization of plasma protein C inhibitor". Thrombosis Research. 55 (3): 369–84. doi:10.1016/0049-3848(89)90069-8. PMID 2551064.
  • Fung MR, Hay CW, MacGillivray RT (June 1985). "Characterization of an almost full-length cDNA coding for human blood coagulation factor X". Proceedings of the National Academy of Sciences of the United States of America. 82 (11): 3591–5. Bibcode:1985PNAS...82.3591F. doi:10.1073/pnas.82.11.3591. PMC 397831. PMID 2582420.
  • Jagadeeswaran P, Reddy SV, Rao KJ, Hamsabhushanam K, Lyman G (December 1989). "Cloning and characterization of the 5' end (exon 1) of the gene encoding human factor X". Gene. 84 (2): 517–9. doi:10.1016/0378-1119(89)90529-5. PMID 2612918.
  • Reddy SV, Zhou ZQ, Rao KJ, Scott JP, Watzke H, High KA, Jagadeeswaran P (October 1989). "Molecular characterization of human factor XSan Antonio". Blood. 74 (5): 1486–90. doi:10.1182/blood.V74.5.1486.1486. PMID 2790181.
  • Kaul RK, Hildebrand B, Roberts S, Jagadeeswaran P (1986). "Isolation and characterization of human blood-coagulation factor X cDNA". Gene. 41 (2–3): 311–4. doi:10.1016/0378-1119(86)90112-5. PMID 3011603.
  • Broze GJ, Warren LA, Novotny WF, Higuchi DA, Girard JJ, Miletich JP (February 1988). "The lipoprotein-associated coagulation inhibitor that inhibits the factor VII-tissue factor complex also inhibits factor Xa: insight into its possible mechanism of action". Blood. 71 (2): 335–43. doi:10.1182/blood.V71.2.335.335. PMID 3422166.
  • Gilgenkrantz S, Briquel ME, André E, Alexandre P, Jalbert P, Le Marec B, Pouzol P, Pommereuil M (1986). "Structural genes of coagulation factors VII and X located on 13q34". Annales de Génétique. 29 (1): 32–5. PMID 3487272.
  • Leytus SP, Foster DC, Kurachi K, Davie EW (September 1986). "Gene for human factor X: a blood coagulation factor whose gene organization is essentially identical with that of factor IX and protein C". Biochemistry. 25 (18): 5098–102. doi:10.1021/bi00366a018. PMID 3768336.
  • Leytus SP, Chung DW, Kisiel W, Kurachi K, Davie EW (June 1984). "Characterization of a cDNA coding for human factor X". Proceedings of the National Academy of Sciences of the United States of America. 81 (12): 3699–702. Bibcode:1984PNAS...81.3699L. doi:10.1073/pnas.81.12.3699. PMC 345286. PMID 6587384.
  • McMullen BA, Fujikawa K, Kisiel W, Sasagawa T, Howald WN, Kwa EY, Weinstein B (June 1983). "Complete amino acid sequence of the light chain of human blood coagulation factor X: evidence for identification of residue 63 as beta-hydroxyaspartic acid". Biochemistry. 22 (12): 2875–84. doi:10.1021/bi00281a016. PMID 6871167.
  • Marchetti G, Castaman G, Pinotti M, Lunghi B, Di Iasio MG, Ruggieri M, Rodeghiero F, Bernardi F (August 1995). "Molecular bases of CRM+ factor X deficiency: a frequent mutation (Ser334Pro) in the catalytic domain and a substitution (Glu102Lys) in the second EGF-like domain". British Journal of Haematology. 90 (4): 910–5. doi:10.1111/j.1365-2141.1995.tb05214.x. PMID 7669671. S2CID 29324903.
  • Morgenstern KA, Sprecher C, Holth L, Foster D, Grant FJ, Ching A, Kisiel W (March 1994). "Complementary DNA cloning and kinetic characterization of a novel intracellular serine proteinase inhibitor: mechanism of action with trypsin and factor Xa as model proteinases". Biochemistry. 33 (11): 3432–41. doi:10.1021/bi00177a037. PMID 8136380.
  • Heeb MJ, Rosing J, Bakker HM, Fernandez JA, Tans G, Griffin JH (March 1994). "Protein S binds to and inhibits factor Xa". Proceedings of the National Academy of Sciences of the United States of America. 91 (7): 2728–32. Bibcode:1994PNAS...91.2728H. doi:10.1073/pnas.91.7.2728. PMC 43443. PMID 8146182.
  • Inoue K, Morita T (November 1993). "Identification of O-linked oligosaccharide chains in the activation peptides of blood coagulation factor X. The role of the carbohydrate moieties in the activation of factor X". European Journal of Biochemistry. 218 (1): 153–63. doi:10.1111/j.1432-1033.1993.tb18361.x. PMID 8243461.
  • Padmanabhan K, Padmanabhan KP, Tulinsky A, Park CH, Bode W, Huber R, Blankenship DT, Cardin AD, Kisiel W (August 1993). "Structure of human des(1-45) factor Xa at 2.2 A resolution". Journal of Molecular Biology. 232 (3): 947–66. doi:10.1006/jmbi.1993.1441. PMID 8355279.
  • Sinha U, Wolf DL (February 1993). "Carbohydrate residues modulate the activation of coagulation factor X". The Journal of Biological Chemistry. 268 (5): 3048–51. doi:10.1016/S0021-9258(18)53657-7. PMID 8428982.

factor, confused, with, hemin, found, chocolate, agar, other, uses, disambiguation, also, known, eponym, stuart, prower, factor, enzyme, coagulation, cascade, serine, endopeptidase, protease, group, clan, synthesized, liver, requires, vitamin, synthesis, f10av. Not to be confused with Factor X hemin found in chocolate agar For other uses see Factor X disambiguation Factor X also known by the eponym Stuart Prower factor is an enzyme EC 3 4 21 6 of the coagulation cascade It is a serine endopeptidase protease group S1 PA clan Factor X is synthesized in the liver and requires vitamin K for its synthesis F10Available structuresPDBOrtholog search PDBe RCSBList of PDB id codes1C5M 1EZQ 1F0R 1F0S 1FAX 1FJS 1G2L 1G2M 1HCG 1IOE 1IQE 1IQF 1IQG 1IQH 1IQI 1IQJ 1IQK 1IQL 1IQM 1IQN 1KSN 1LPG 1LPK 1LPZ 1LQD 1MQ5 1MQ6 1NFU 1NFW 1NFX 1NFY 1P0S 1V3X 1WU1 1XKA 1XKB 1Z6E 2BMG 2BOH 2BOK 2BQ6 2BQ7 2BQW 2CJI 2D1J 2EI6 2EI7 2EI8 2FZZ 2G00 2GD4 2H9E 2J2U 2J34 2J38 2J4I 2J94 2J95 2JKH 2P16 2P3F 2P3T 2P3U 2P93 2P94 2P95 2PHB 2PR3 2Q1J 2RA0 2UWL 2UWO 2UWP 2VH0 2VH6 2VVC 2VVU 2VVV 2VWL 2VWM 2VWN 2VWO 2W26 2W3I 2W3K 2WYG 2WYJ 2XBV 2XBW 2XBX 2XBY 2XC0 2XC4 2XC5 2Y5F 2Y5G 2Y5H 2Y7X 2Y7Z 2Y80 2Y81 2Y82 3CEN 3CS7 3ENS 3FFG 3HPT 3IIT 3K9X 3KL6 3Q3K 3SW2 3TK5 3TK6 4A7I 3KQB 3KQC 3KQD 3KQE 3LIW 3M36 3M37 4BTI 4BTT 4BTU 4Y6D 4Y71 4Y76 4Y79 4Y7A 4Y7B 4ZHA 4ZH8 5K0HIdentifiersAliasesF10 FX FXA coagulation factor XExternal IDsOMIM 613872 MGI 103107 HomoloGene 30976 GeneCards F10Gene location Human Chr Chromosome 13 human 1 Band13q34Start113 122 799 bp 1 End113 149 529 bp 1 Gene location Mouse Chr Chromosome 8 mouse 2 Band8 A1 1 8 5 73 cMStart13 087 308 bp 2 End13 106 676 bp 2 RNA expression patternBgeeHumanMouse ortholog Top expressed inright lobe of liverstromal cell of endometriumcanal of the cervixgastric mucosaright coronary arteryleft uterine tubeislet of Langerhansright lungleft coronary arterygallbladderTop expressed inleft lobe of liveryolk sacgallbladderbloodsexually immature organismbone marrowprimitive streakright lung lobeabdominal wallileumMore reference expression dataBioGPSMore reference expression dataGene ontologyMolecular functioncalcium ion binding peptidase activity protein binding serine type peptidase activity serine type endopeptidase activity phospholipid binding hydrolase activityCellular componentendoplasmic reticulum lumen intrinsic component of external side of plasma membrane plasma membrane extracellular region Golgi lumen extracellular spaceBiological processhemostasis positive regulation of protein kinase B signaling positive regulation of cell migration blood coagulation proteolysis endoplasmic reticulum to Golgi vesicle mediated transport blood coagulation extrinsic pathwaySources Amigo QuickGOOrthologsSpeciesHumanMouseEntrez215914058EnsemblENSG00000126218ENSMUSG00000031444UniProtP00742O88947RefSeq mRNA NM 000504NM 001312674NM 001312675NM 001242368NM 007972RefSeq protein NP 000495NP 001299603NP 001299604NP 001229297NP 031998Location UCSC Chr 13 113 12 113 15 MbChr 8 13 09 13 11 MbPubMed search 3 4 WikidataView Edit HumanView Edit MouseFactor X is activated by hydrolysis into factor Xa by both factor IX with its cofactor factor VIII in a complex known as intrinsic tenase and factor VII with its cofactor tissue factor a complex known as extrinsic tenase It is therefore the first member of the final common pathway or thrombin pathway It acts by cleaving prothrombin in two places an Arg Thr and then an Arg Ile bond which yields the active thrombin This process is optimized when factor Xa is complexed with activated co factor V in the prothrombinase complex Factor Xa is inactivated by protein Z dependent protease inhibitor ZPI a serine protease inhibitor serpin The affinity of this protein for factor Xa is increased 1000 fold by the presence of protein Z while it does not require protein Z for inactivation of factor XI Defects in protein Z lead to increased factor Xa activity and a propensity for thrombosis The half life of factor X is 40 45 hours Contents 1 Structure 2 Genetics 3 Role in disease 4 Therapeutic use 5 Use in biochemistry 6 Factor Xa 7 History 8 Interactions 9 References 10 External links 11 Further readingStructure editSee also Factor IX Domain architecture The first crystal structure of human factor Xa was deposited in May 1993 To date 191 crystal structures of factor Xa with various inhibitors have been deposited in the protein data bank The active site of factor Xa is divided into four subpockets as S1 S2 S3 and S4 The S1 subpocket determines the major component of selectivity and binding The S2 sub pocket is small shallow and not well defined It merges with the S4 subpocket The S3 sub pocket is located on the rim of the S1 pocket and is quite exposed to solvent The S4 sub pocket has three ligand binding domains the hydrophobic box the cationic hole and the water site Factor Xa inhibitors generally bind in an L shaped conformation where one group of the ligand occupies the anionic S1 pocket lined by residues Asp189 Ser195 and Tyr228 and another group of the ligand occupies the aromatic S4 pocket lined by residues Tyr99 Phe174 and Trp215 Typically a fairly rigid linker group bridges these two interaction sites 5 Genetics editThe human factor X gene is located on chromosome 13 13q34 Role in disease editMain article Factor X deficiency Inborn deficiency of factor X is very rare 1 1 000 000 and may present with epistaxis nosebleeds hemarthrosis bleeding into joints and gastrointestinal blood loss Apart from congenital deficiency low factor X levels may occur occasionally in a number of disease states For example factor X deficiency may be seen in amyloidosis where factor X is adsorbed to the amyloid fibrils in the vasculature Deficiency of vitamin K or antagonism by warfarin or similar medication leads to the production of an inactive factor X In warfarin therapy this is desirable to prevent thrombosis As of late 2007 four out of five emerging anti coagulation therapeutics targeted this enzyme 6 Inhibiting Factor Xa would offer an alternate method for anticoagulation Direct Xa inhibitors are popular anticoagulants Polymorphisms in Factor X have been associated with an increased prevalence in bacterial infections suggesting a possible role directly regulating the immune response to bacterial pathogens 7 Therapeutic use editFactor X is part of fresh frozen plasma and the prothrombinase complex There are two commercially available Factor X concentrates Factor X P Behring manufactured by CSL Behring 8 and high purity Factor X Coagadex produced by Bio Products Laboratory and approved for use in the United States by the FDA in October 2015 and in the EU in March 2016 after earlier acceptance by CHMP and COMP 9 10 11 12 Kcentra manufactured by CSL Behring is a concentrate containing coagulation Factors II VII IX and X and antithrombotic Proteins C and S 13 Use in biochemistry editThe factor Xa protease can be used in biochemistry to cleave off protein tags that improve expression or purification of a protein of interest Its preferred cleavage site after the arginine in the sequence Ile Glu Asp Gly Arg IEGR or IDGR can easily be engineered between a tag sequence and the protein of interest After expression and purification the tag is then proteolytically removed by factor Xa Factor Xa edit nbsp Blood coagulation pathways in vivo showing the central role played by thrombinFactor Xa is the activated form of the coagulation factor X also known as thrombokinase and known eponymously as Stuart Prower factor Factor X is an enzyme a serine endopeptidase which plays a key role at several stages of the coagulation system Factor X is synthesized in the liver The most commonly used anticoagulants in clinical practice warfarin and the heparin series of anticoagulants and fondaparinux act to inhibit the action of Factor Xa in various degrees Traditional models of coagulation developed in the 1960s envisaged two separate cascades the extrinsic tissue factor TF pathway and the intrinsic pathway These pathways converge to a common point the formation of the Factor Xa Va complex which together with calcium and bound on a phospholipids surface generate thrombin Factor IIa from prothrombin Factor II A new model the cell based model of anticoagulation appears to explain more fully the steps in coagulation This model has three stages 1 initiation of coagulation on TF bearing cells 2 amplification of the procoagulant signal by thrombin generated on the TF bearing cell and 3 propagation of thrombin generation on the platelet surface Factor Xa plays a key role in all three of these stages 14 In stage 1 Factor VII binds to the transmembrane protein TF on the surface of cells and is converted to Factor VIIa The result is a Factor VIIa TF complex which catalyzes the activation of Factor X and Factor IX Factor Xa formed on the surface of the TF bearing cell interacts with Factor Va to form the prothrombinase complex which generates small amounts of thrombin on the surface of TF bearing cells In stage 2 the amplification stage if enough thrombin has been generated then activation of platelets and platelet associated cofactors occurs In stage 3 thrombin generation Factor XIa activates free Factor IX on the surface of activated platelets The activated Factor IXa with Factor VIIIa forms the tenase complex This tenase complex activates more Factor X which in turn forms new prothrombinase complexes with Factor Va Factor Xa is the prime component of the prothrombinase complex which converts large amounts of prothrombin the thrombin burst Each molecule of Factor Xa can generate 1000 molecules of thrombin This large burst of thrombin is responsible for fibrin polymerization to form a thrombus Factor Xa also plays a role in other biological processes that are not directly related to coagulation like wound healing tissue remodelling inflammation angiogenesis and atherosclerosis Inhibition of the synthesis or activity of Factor X is the mechanism of action for many anticoagulants in use today Warfarin a synthetic derivative of coumarin is the most widely used oral anticoagulant in the US In some European countries other coumarin derivatives phenprocoumon and acenocoumarol are used These agents known as vitamin K antagonists VKA inhibit the vitamin K dependent carboxylation of Factors II prothrombin VII IX X in the hepatocyte This carboxylation after the translation is essential for the physiological activity 15 Heparin unfractionated heparin and its derivatives low molecular weight heparin LMWH bind to a plasma cofactor antithrombin AT to inactivate several coagulation factors IIa Xa XIa and XIIa The affinity of unfractionated heparin and the various LMWHs for Factor Xa varies considerably The efficacy of heparin based anticoagulants increases as selectivity for Factor Xa increases LMWH shows increased inactivation of Factor Xa compared to unfractionated heparin and fondaparinux an agent based on the critical pentasacharide sequence of heparin shows more selectivity than LMWH This inactivation of Factor Xa by heparins is termed indirect since it relies on the presence of AT and not a direct interaction with Factor Xa Recently a new series of specific direct acting inhibitors of Factor Xa has been developed These include the drugs rivaroxaban apixaban betrixaban LY517717 darexaban YM150 edoxaban and 813893 These agents have several theoretical advantages over current therapy They may be given orally They have rapid onset of action And they may be more effective against Factor Xa in that they inhibit both free Factor Xa and Factor Xa in the prothrombinase complex 16 History editAmerican and British scientists described deficiency of factor X independently in 1953 and 1956 respectively As with some other coagulation factors the factor was initially named after these patients a Mr Rufus Stuart 1921 and a Miss Audrey Prower 1934 At that time those investigators could not know that the human genetic defect they had identified would be found in the previously characterized enzyme called thrombokinase Thrombokinase was the name coined by Paul Morawitz in 1904 to describe the substance that converted prothrombin to thrombin and caused blood to clot 17 That name embodied an important new concept in understanding blood coagulation that an enzyme was critically important in the activation of prothrombin Morawitz believed that his enzyme came from cells such as platelets yet in keeping with the state of knowledge about enzymes at that time he had no clear idea about the chemical nature of his thrombokinase or its mechanism of action Those uncertainties led to decades during which the terms thrombokinase and thromboplastin were both used to describe the activator of prothrombin and led to controversy about its chemical nature and origin 18 In 1947 J Haskell Milstone isolated a proenzyme from bovine plasma which when activated converted prothrombin to thrombin Following Morawitz s designation he called it prothrombokinase 19 and by 1951 had purified the active enzyme thrombokinase Over the next several years he showed that thrombokinase was a proteolytic enzyme that by itself could activate prothrombin Its activity was greatly enhanced by addition of calcium other serum factors and tissue extracts 20 which represented the thromboplastins that promoted the conversion of prothrombin to thrombin by their interaction with thrombokinase In 1964 Milstone summarized his work and that of others There are many chemical reactions which are so slow that they would not be of physiological use if they were not accelerated by enzymes We are now confronted with a reaction catalyzed by an enzyme which is still too slow unless aided by accessory factors 21 Interactions editFactor X has been shown to interact with Tissue factor pathway inhibitor 22 References edit a b c GRCh38 Ensembl release 89 ENSG00000126218 Ensembl May 2017 a b c GRCm38 Ensembl release 89 ENSMUSG00000031444 Ensembl May 2017 Human PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Mouse PubMed Reference National Center for Biotechnology Information U S National Library of Medicine Presentation on Direct Factor Xa Inhibitors Archived from the original on 2016 03 03 Retrieved 2010 04 08 Ron Winslow Avery Johnson 2007 12 10 Race Is on for the Next Blood Thinner The Wall Street Journal p A12 Archived from the original on 2016 03 10 Retrieved 2008 01 06 The flurry of interest reflects increasing understanding of what doctors call the coagulation cascade Four new blood thinners target an enzyme called factor Xa one of several enzymes that play an important role in the cascade Skaar EP Pulley J Jerome RN Pruijssers A Shirey Rice JK Margaritis P Himmel LE Monteith AJ Choby JE 2019 02 19 PheWAS uncovers a pathological role of coagulation Factor X during Acinetobacter baumannii infection Infection and Immunity 87 5 IAI 00031 19 doi 10 1128 IAI 00031 19 ISSN 0019 9567 PMC 6479028 PMID 30782860 Mark Brooker 2008 Registry of Clotting Factor Concentrates Eighth Edition 2008 World Federation of Hemophilia FDA approves first Factor X concentrate to treat patients with rare hereditary bleeding disorder Press release US FDA October 20 2015 Archived from the original on October 21 2015 Retrieved October 21 2015 Until today s orphan drug approval no specific coagulation factor replacement therapy was available for patients with hereditary Factor X deficiency Coagadex U S Food and Drug Administration 28 June 2017 Archived from the original on 22 July 2017 Retrieved 2 April 2020 a href Template Cite web html title Template Cite web cite web a CS1 maint unfit URL link Coagadex U S Food and Drug Administration 21 September 2018 Archived from the original on 17 December 2019 Retrieved 2 April 2020 Coagadex EPAR European Medicines Agency EMA 17 September 2018 Archived from the original on 30 December 2019 Retrieved 21 April 2020 Kcentra prothrombin coagulation factor vii human coagulation factor ix human coagulation factor x human protein c protein s human and water kit DailyMed 22 October 2018 Archived from the original on 25 March 2021 Retrieved 21 April 2020 Hoffman M Monroe DM February 2007 Coagulation 2006 a modern view of hemostasis Hematology Oncology Clinics of North America 21 1 1 11 doi 10 1016 j hoc 2006 11 004 PMID 17258114 Golan DE 2012 Principles of Pharmacology The Pathophysiologic Basis of Drug Therapy Philadelphia Lippincott Williams amp Wilkins p 387 ISBN 978 1 4511 1805 6 Turpie AG June 2007 Oral direct factor Xa inhibitors in development for the prevention and treatment of thromboembolic diseases Arteriosclerosis Thrombosis and Vascular Biology 27 6 1238 47 CiteSeerX 10 1 1 536 872 doi 10 1161 ATVBAHA 107 139402 PMID 17379841 S2CID 2998452 Morawitz P Beitrage zur Kenntnis der Blutgerinnung Deutsches Archiv fur Klinische Medizin 79 432 442 Milstone JH 1952 On the evolution of blood clotting theory Medicine 31 4 411 447 doi 10 1097 00005792 195212000 00004 PMID 13012730 Milstone JH 1947 Prothrombokinase and the three stages of blood coagulation Science 106 2762 546 547 Bibcode 1947Sci 106 546M doi 10 1126 science 106 2762 546 a PMID 17741228 S2CID 35643683 Milstone L 2021 Factor Xa Thrombokinase from Paul Morawitz to J Haskell Milstone Journal Thrombosis and Thrombolysis 52 2 364 370 doi 10 1007 s11239 021 02387 6 PMID 33484373 S2CID 231682954 Milstone JH 1964 Thrombokinase as prime activator of prothrombin historical perspectives and present status Federation Proceedings 23 2 742 748 doi 10 1085 jgp 47 2 315 PMC 2195336 PMID 14080818 Broze GJ Warren LA Novotny WF Higuchi DA Girard JJ Miletich JP February 1988 The lipoprotein associated coagulation inhibitor that inhibits the factor VII tissue factor complex also inhibits factor Xa insight into its possible mechanism of action Blood 71 2 335 43 doi 10 1182 blood V71 2 335 335 PMID 3422166 External links editThe MEROPS online database for peptidases and their inhibitors S01 216 Archived 2020 05 29 at the Wayback Machine med 3495 at eMedicine Factor X deficiencyFurther reading editCooper DN Millar DS Wacey A Pemberton S Tuddenham EG July 1997 Inherited factor X deficiency molecular genetics and pathophysiology Thrombosis and Haemostasis 78 1 161 72 doi 10 1055 s 0038 1657520 PMID 9198147 S2CID 27129058 Hassan HJ Leonardi A Chelucci C Mattia G Macioce G Guerriero R Russo G Mannucci PM Peschle C September 1990 Blood coagulation factors in human embryonic fetal development preferential expression of the FVII tissue factor pathway Blood 76 6 1158 64 doi 10 1182 blood V76 6 1158 1158 PMID 1698100 Messier TL Pittman DD Long GL Kaufman RJ Church WR March 1991 Cloning and expression in COS 1 cells of a full length cDNA encoding human coagulation factor X Gene 99 2 291 4 doi 10 1016 0378 1119 91 90141 W PMID 1902434 Krishnaswamy S March 1990 Prothrombinase complex assembly Contributions of protein protein and protein membrane interactions toward complex formation The Journal of Biological Chemistry 265 7 3708 18 doi 10 1016 S0021 9258 19 39652 8 PMID 2303476 Espana F Berrettini M Griffin JH August 1989 Purification and characterization of plasma protein C inhibitor Thrombosis Research 55 3 369 84 doi 10 1016 0049 3848 89 90069 8 PMID 2551064 Fung MR Hay CW MacGillivray RT June 1985 Characterization of an almost full length cDNA coding for human blood coagulation factor X Proceedings of the National Academy of Sciences of the United States of America 82 11 3591 5 Bibcode 1985PNAS 82 3591F doi 10 1073 pnas 82 11 3591 PMC 397831 PMID 2582420 Jagadeeswaran P Reddy SV Rao KJ Hamsabhushanam K Lyman G December 1989 Cloning and characterization of the 5 end exon 1 of the gene encoding human factor X Gene 84 2 517 9 doi 10 1016 0378 1119 89 90529 5 PMID 2612918 Reddy SV Zhou ZQ Rao KJ Scott JP Watzke H High KA Jagadeeswaran P October 1989 Molecular characterization of human factor XSan Antonio Blood 74 5 1486 90 doi 10 1182 blood V74 5 1486 1486 PMID 2790181 Kaul RK Hildebrand B Roberts S Jagadeeswaran P 1986 Isolation and characterization of human blood coagulation factor X cDNA Gene 41 2 3 311 4 doi 10 1016 0378 1119 86 90112 5 PMID 3011603 Broze GJ Warren LA Novotny WF Higuchi DA Girard JJ Miletich JP February 1988 The lipoprotein associated coagulation inhibitor that inhibits the factor VII tissue factor complex also inhibits factor Xa insight into its possible mechanism of action Blood 71 2 335 43 doi 10 1182 blood V71 2 335 335 PMID 3422166 Gilgenkrantz S Briquel ME Andre E Alexandre P Jalbert P Le Marec B Pouzol P Pommereuil M 1986 Structural genes of coagulation factors VII and X located on 13q34 Annales de Genetique 29 1 32 5 PMID 3487272 Leytus SP Foster DC Kurachi K Davie EW September 1986 Gene for human factor X a blood coagulation factor whose gene organization is essentially identical with that of factor IX and protein C Biochemistry 25 18 5098 102 doi 10 1021 bi00366a018 PMID 3768336 Leytus SP Chung DW Kisiel W Kurachi K Davie EW June 1984 Characterization of a cDNA coding for human factor X Proceedings of the National Academy of Sciences of the United States of America 81 12 3699 702 Bibcode 1984PNAS 81 3699L doi 10 1073 pnas 81 12 3699 PMC 345286 PMID 6587384 McMullen BA Fujikawa K Kisiel W Sasagawa T Howald WN Kwa EY Weinstein B June 1983 Complete amino acid sequence of the light chain of human blood coagulation factor X evidence for identification of residue 63 as beta hydroxyaspartic acid Biochemistry 22 12 2875 84 doi 10 1021 bi00281a016 PMID 6871167 Marchetti G Castaman G Pinotti M Lunghi B Di Iasio MG Ruggieri M Rodeghiero F Bernardi F August 1995 Molecular bases of CRM factor X deficiency a frequent mutation Ser334Pro in the catalytic domain and a substitution Glu102Lys in the second EGF like domain British Journal of Haematology 90 4 910 5 doi 10 1111 j 1365 2141 1995 tb05214 x PMID 7669671 S2CID 29324903 Morgenstern KA Sprecher C Holth L Foster D Grant FJ Ching A Kisiel W March 1994 Complementary DNA cloning and kinetic characterization of a novel intracellular serine proteinase inhibitor mechanism of action with trypsin and factor Xa as model proteinases Biochemistry 33 11 3432 41 doi 10 1021 bi00177a037 PMID 8136380 Heeb MJ Rosing J Bakker HM Fernandez JA Tans G Griffin JH March 1994 Protein S binds to and inhibits factor Xa Proceedings of the National Academy of Sciences of the United States of America 91 7 2728 32 Bibcode 1994PNAS 91 2728H doi 10 1073 pnas 91 7 2728 PMC 43443 PMID 8146182 Inoue K Morita T November 1993 Identification of O linked oligosaccharide chains in the activation peptides of blood coagulation factor X The role of the carbohydrate moieties in the activation of factor X European Journal of Biochemistry 218 1 153 63 doi 10 1111 j 1432 1033 1993 tb18361 x PMID 8243461 Padmanabhan K Padmanabhan KP Tulinsky A Park CH Bode W Huber R Blankenship DT Cardin AD Kisiel W August 1993 Structure of human des 1 45 factor Xa at 2 2 A resolution Journal of Molecular Biology 232 3 947 66 doi 10 1006 jmbi 1993 1441 PMID 8355279 Sinha U Wolf DL February 1993 Carbohydrate residues modulate the activation of coagulation factor X The Journal of Biological Chemistry 268 5 3048 51 doi 10 1016 S0021 9258 18 53657 7 PMID 8428982 Portal nbsp Biology Retrieved from https en wikipedia org w index php title Factor X amp oldid 1212944243, wikipedia, wiki, book, books, library,

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