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Susanna-Assunta Sansone

Susanna-Assunta Sansone is a British-Italian data scientist who is professor of data readiness at the University of Oxford where she leads the data readiness group and serves as associate director of the Oxford e-Research Centre.[3] Her research investigates techniques for improving the interoperability, reproducibility and integrity of data.[1][4]

Susanna-Assunta Sansone
Susanna-Assunta Sansone
NationalityItalian
Other namesFAIR lady[2]
Alma materUniversity of Naples Federico II
Imperial College London (BSc, PhD)
Scientific career
FieldsOpen science
Reproducibility
Data management
Data publication
FAIR data[1]
InstitutionsUniversity of Oxford
Oxford e-Research Centre
European Bioinformatics Institute
Research Data Alliance
Microscience Ltd
ThesisThe role of CU-ZN-cofactored superoxide dismutase in salmonella virulence (2001)
Websiteeng.ox.ac.uk/people/susanna-assunta-sansone/

Early life and education edit

Sansone is from Italy. She was an undergraduate student at the University of Naples Federico II.[5] She earned her bachelor's degree in molecular biology and a PhD in microbiology at Imperial College London,[6] where she worked in St Mary's Hospital, London.[7] Her thesis investigated the role of the cofactored enzyme superoxide dismutase in the virulence of Salmonella.[6]

Research and career edit

After earning her doctorate, she moved to Microscience Ltd, where she characterised vaccine strains.[7] In 2001, Sansone joined the European Bioinformatics Institute (EBI), part of the European Molecular Biology Laboratory (EMBL) where she worked in research data management.[7] Sansone joined the University of Oxford in 2010.[8] She became concerned that whilst there were vast amounts of data in the public domain, the majority of it was not reusable. To make data reusable, Sansone encourages researchers to combine their data with metadata: a description of what the data means.[9] Sansone has described data reproducibility as “the foundation of every scientific field,”.[10]

Sansone's research investigates strategies to enable the creation of research objects that are Findable, Accessible, Interoperable and Reusable (FAIR).[7][11][3] She co-founded the peer-reviewed journal Scientific Data in 2013, and serves as chair of the Research Data Alliance.[12][13] She co-authored the FAIR data principles in 2016,[14] a set of guidelines for the scientific ecosystem.[15] FAIR principles have since been adopted by funding bodies, scientific publishers and the private sector.[15] Sansone works with partners to deliver data stewardship and data governance training and to develop guidelines to make data more accessible.[16] She is one of the co-creators the FAIR Cookbook, an online resource for life scientists to enable them to keep FAIR data.[17] Her research has been funded by the Biotechnology and Biological Sciences Research Council (BBSRC) and the European Union.[18]

Selected publications edit

Her publications[1][4][19] include

  • The FAIR Guiding Principles for scientific data management and stewardship[14]
  • ArrayExpress--a public database of microarray experiments and gene expression profiles[20]
  • The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration[21]
  • The minimum information about a genome sequence (MIGS) specification[22]
  • MetaboLights—an open-access general-purpose repository for metabolomics studies and associated meta-data[23]
  • COVID-19 pandemic reveals the peril of ignoring metadata standards [24]
  • ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level[25]
  • Toward interoperable bioscience data[26]
  • Modeling biomedical experimental processes with OBI [27]

References edit

  1. ^ a b c Susanna-Assunta Sansone publications indexed by Google Scholar  
  2. ^ Susanna-Assunta Sansone on Twitter  
  3. ^ a b "Professor Susanna-Assunta Sansone". ox.ac.uk. University of Oxford. Retrieved 18 February 2022.
  4. ^ a b Susanna-Assunta Sansone publications from Europe PubMed Central
  5. ^ "Susanna-Assunta Sansone". elixir-europe.org. ELIXIR. Retrieved 18 February 2022.
  6. ^ a b Sansone, Susanna-Assunta (2001). The role of CU-ZN-cofactored superoxide dismutase in salmonella virulence. london.ac.uk (PhD thesis). Imperial College London (University of London). OCLC 498579453. EThOS uk.bl.ethos.246768.
  7. ^ a b c d "Susanna-Assunta Sansone". eng.ox.ac.uk. Retrieved 18 February 2022.
  8. ^ "Susanna-Assunta Sansone". fairsfair.eu. 11 June 2019. Retrieved 18 February 2022.
  9. ^ Van Noorden, Richard (2013). "Data-sharing: Everything on display". Nature. 500 (7461): 243–245. doi:10.1038/nj7461-243a. ISSN 1476-4687. PMID 23930278.
  10. ^ "Towards Improved Data Reproducibility". technologynetworks.com. Informatics from Technology Networks. Retrieved 18 February 2022.
  11. ^ "Susanna-Assunta Sansone". nature.com. Retrieved 18 February 2022.
  12. ^ "Editors & Editorial Board". nature.com. Scientific Data. Retrieved 18 February 2022.
  13. ^ "Susanna-Assunta Sansone". rd-alliance.org. Retrieved 18 February 2022.
  14. ^ a b Mark D. Wilkinson; Michel Dumontier; IJsbrand Jan Aalbersberg; et al. (15 March 2016). "The FAIR Guiding Principles for scientific data management and stewardship". Scientific Data. 3 (1): 160018. doi:10.1038/SDATA.2016.18. ISSN 2052-4463. PMC 4792175. PMID 26978244. Wikidata Q27942822.
  15. ^ a b "Pharma-backed Toolkit to Speed Up Adoption of FAIR Data Principles". technologynetworks.com. Informatics from Technology Networks. Retrieved 18 February 2022.
  16. ^ "Funded Projects". sansonegroup.eng.ox.ac.uk. Retrieved 18 February 2022.
  17. ^ "FAIR Cookbook". fairplus.github.io. Retrieved 18 February 2022.
  18. ^ "UK government grants awarded to Susanna Sansone". ukri.org. UK Research and Innovation.
  19. ^ Susanna-Assunta Sansone at DBLP Bibliography Server  
  20. ^ H Parkinson; M Kapushesky; M Shojatalab; et al. (28 November 2006). "ArrayExpress--a public database of microarray experiments and gene expression profiles". Nucleic Acids Research. 35 (Database issue): D747-50. doi:10.1093/NAR/GKL995. ISSN 0305-1048. PMC 1716725. PMID 17132828. Wikidata Q33264889.
  21. ^ Barry Smith; Michael Ashburner; Cornelius Rosse; et al. (November 2007). "The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration". Nature Biotechnology. 25 (11): 1251–5. doi:10.1038/NBT1346. ISSN 1087-0156. PMC 2814061. PMID 17989687. Wikidata Q19671692.
  22. ^ Dawn Field; George Garrity; Tanya Gray; et al. (May 2008). "The minimum information about a genome sequence (MIGS) specification". Nature Biotechnology. 26 (5): 541–7. doi:10.1038/NBT1360. ISSN 1087-0156. PMC 2409278. PMID 18464787. Wikidata Q28279450.
  23. ^ Kenneth Haug; Reza M. Salek; Pablo Conesa; et al. (January 2013). "MetaboLights--an open-access general-purpose repository for metabolomics studies and associated meta-data". Nucleic Acids Research. 41 (Database issue): D781-6. doi:10.1093/NAR/GKS1004. ISSN 0305-1048. PMC 3531110. PMID 23109552. Wikidata Q27818909.
  24. ^ Lynn M Schriml; Maria Chuvochina; Neil Davies; et al. (19 June 2020). "COVID-19 pandemic reveals the peril of ignoring metadata standards". Scientific Data. 7 (1): 188. doi:10.1038/S41597-020-0524-5. ISSN 2052-4463. PMID 32561801. Wikidata Q96473059.
  25. ^ Philippe Rocca-Serra; Marco Brandizi; Eamonn Maguire; et al. (15 September 2010). "ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level". Bioinformatics. 26 (18): 2354–6. doi:10.1093/BIOINFORMATICS/BTQ415. ISSN 1367-4803. PMC 2935443. PMID 20679334. Wikidata Q28749402.
  26. ^ Susanna-Assunta Sansone; Philippe Rocca-Serra; Dawn Field; et al. (27 January 2012). "Toward interoperable bioscience data". Nature Genetics. 44 (2): 121–6. doi:10.1038/NG.1054. ISSN 1061-4036. PMC 3428019. PMID 22281772. Wikidata Q28090939.
  27. ^ Ryan R Brinkman; Mélanie Courtot; Dirk Derom; et al. (22 June 2010). "Modeling biomedical experimental processes with OBI". Journal of Biomedical Semantics. 1 Suppl 1 (Suppl 1): S7. doi:10.1186/2041-1480-1-S1-S7. ISSN 2041-1480. PMC 2903726. PMID 20626927. Wikidata Q28287823.

susanna, assunta, sansone, british, italian, data, scientist, professor, data, readiness, university, oxford, where, leads, data, readiness, group, serves, associate, director, oxford, research, centre, research, investigates, techniques, improving, interopera. Susanna Assunta Sansone is a British Italian data scientist who is professor of data readiness at the University of Oxford where she leads the data readiness group and serves as associate director of the Oxford e Research Centre 3 Her research investigates techniques for improving the interoperability reproducibility and integrity of data 1 4 Susanna Assunta SansoneSusanna Assunta SansoneNationalityItalianOther namesFAIR lady 2 Alma materUniversity of Naples Federico II Imperial College London BSc PhD Scientific careerFieldsOpen scienceReproducibilityData managementData publicationFAIR data 1 InstitutionsUniversity of OxfordOxford e Research CentreEuropean Bioinformatics InstituteResearch Data Alliance Microscience LtdThesisThe role of CU ZN cofactored superoxide dismutase in salmonella virulence 2001 Websiteeng wbr ox wbr ac wbr uk wbr people wbr susanna assunta sansone wbr Contents 1 Early life and education 2 Research and career 2 1 Selected publications 3 ReferencesEarly life and education editSansone is from Italy She was an undergraduate student at the University of Naples Federico II 5 She earned her bachelor s degree in molecular biology and a PhD in microbiology at Imperial College London 6 where she worked in St Mary s Hospital London 7 Her thesis investigated the role of the cofactored enzyme superoxide dismutase in the virulence of Salmonella 6 Research and career editAfter earning her doctorate she moved to Microscience Ltd where she characterised vaccine strains 7 In 2001 Sansone joined the European Bioinformatics Institute EBI part of the European Molecular Biology Laboratory EMBL where she worked in research data management 7 Sansone joined the University of Oxford in 2010 8 She became concerned that whilst there were vast amounts of data in the public domain the majority of it was not reusable To make data reusable Sansone encourages researchers to combine their data with metadata a description of what the data means 9 Sansone has described data reproducibility as the foundation of every scientific field 10 Sansone s research investigates strategies to enable the creation of research objects that are Findable Accessible Interoperable and Reusable FAIR 7 11 3 She co founded the peer reviewed journal Scientific Data in 2013 and serves as chair of the Research Data Alliance 12 13 She co authored the FAIR data principles in 2016 14 a set of guidelines for the scientific ecosystem 15 FAIR principles have since been adopted by funding bodies scientific publishers and the private sector 15 Sansone works with partners to deliver data stewardship and data governance training and to develop guidelines to make data more accessible 16 She is one of the co creators the FAIR Cookbook an online resource for life scientists to enable them to keep FAIR data 17 Her research has been funded by the Biotechnology and Biological Sciences Research Council BBSRC and the European Union 18 Selected publications edit Her publications 1 4 19 include The FAIR Guiding Principles for scientific data management and stewardship 14 ArrayExpress a public database of microarray experiments and gene expression profiles 20 The OBO Foundry coordinated evolution of ontologies to support biomedical data integration 21 The minimum information about a genome sequence MIGS specification 22 MetaboLights an open access general purpose repository for metabolomics studies and associated meta data 23 COVID 19 pandemic reveals the peril of ignoring metadata standards 24 ISA software suite supporting standards compliant experimental annotation and enabling curation at the community level 25 Toward interoperable bioscience data 26 Modeling biomedical experimental processes with OBI 27 References edit a b c Susanna Assunta Sansone publications indexed by Google Scholar nbsp Susanna Assunta Sansone on Twitter nbsp a b Professor Susanna Assunta Sansone ox ac uk University of Oxford Retrieved 18 February 2022 a b Susanna Assunta Sansone publications from Europe PubMed Central Susanna Assunta Sansone elixir europe org ELIXIR Retrieved 18 February 2022 a b Sansone Susanna Assunta 2001 The role of CU ZN cofactored superoxide dismutase in salmonella virulence london ac uk PhD thesis Imperial College London University of London OCLC 498579453 EThOS uk bl ethos 246768 a b c d Susanna Assunta Sansone eng ox ac uk Retrieved 18 February 2022 Susanna Assunta Sansone fairsfair eu 11 June 2019 Retrieved 18 February 2022 Van Noorden Richard 2013 Data sharing Everything on display Nature 500 7461 243 245 doi 10 1038 nj7461 243a ISSN 1476 4687 PMID 23930278 Towards Improved Data Reproducibility technologynetworks com Informatics from Technology Networks Retrieved 18 February 2022 Susanna Assunta Sansone nature com Retrieved 18 February 2022 Editors amp Editorial Board nature com Scientific Data Retrieved 18 February 2022 Susanna Assunta Sansone rd alliance org Retrieved 18 February 2022 a b Mark D Wilkinson Michel Dumontier IJsbrand Jan Aalbersberg et al 15 March 2016 The FAIR Guiding Principles for scientific data management and stewardship Scientific Data 3 1 160018 doi 10 1038 SDATA 2016 18 ISSN 2052 4463 PMC 4792175 PMID 26978244 Wikidata Q27942822 a b Pharma backed Toolkit to Speed Up Adoption of FAIR Data Principles technologynetworks com Informatics from Technology Networks Retrieved 18 February 2022 Funded Projects sansonegroup eng ox ac uk Retrieved 18 February 2022 FAIR Cookbook fairplus github io Retrieved 18 February 2022 UK government grants awarded to Susanna Sansone ukri org UK Research and Innovation Susanna Assunta Sansone at DBLP Bibliography Server nbsp H Parkinson M Kapushesky M Shojatalab et al 28 November 2006 ArrayExpress a public database of microarray experiments and gene expression profiles Nucleic Acids Research 35 Database issue D747 50 doi 10 1093 NAR GKL995 ISSN 0305 1048 PMC 1716725 PMID 17132828 Wikidata Q33264889 Barry Smith Michael Ashburner Cornelius Rosse et al November 2007 The OBO Foundry coordinated evolution of ontologies to support biomedical data integration Nature Biotechnology 25 11 1251 5 doi 10 1038 NBT1346 ISSN 1087 0156 PMC 2814061 PMID 17989687 Wikidata Q19671692 Dawn Field George Garrity Tanya Gray et al May 2008 The minimum information about a genome sequence MIGS specification Nature Biotechnology 26 5 541 7 doi 10 1038 NBT1360 ISSN 1087 0156 PMC 2409278 PMID 18464787 Wikidata Q28279450 Kenneth Haug Reza M Salek Pablo Conesa et al January 2013 MetaboLights an open access general purpose repository for metabolomics studies and associated meta data Nucleic Acids Research 41 Database issue D781 6 doi 10 1093 NAR GKS1004 ISSN 0305 1048 PMC 3531110 PMID 23109552 Wikidata Q27818909 Lynn M Schriml Maria Chuvochina Neil Davies et al 19 June 2020 COVID 19 pandemic reveals the peril of ignoring metadata standards Scientific Data 7 1 188 doi 10 1038 S41597 020 0524 5 ISSN 2052 4463 PMID 32561801 Wikidata Q96473059 Philippe Rocca Serra Marco Brandizi Eamonn Maguire et al 15 September 2010 ISA software suite supporting standards compliant experimental annotation and enabling curation at the community level Bioinformatics 26 18 2354 6 doi 10 1093 BIOINFORMATICS BTQ415 ISSN 1367 4803 PMC 2935443 PMID 20679334 Wikidata Q28749402 Susanna Assunta Sansone Philippe Rocca Serra Dawn Field et al 27 January 2012 Toward interoperable bioscience data Nature Genetics 44 2 121 6 doi 10 1038 NG 1054 ISSN 1061 4036 PMC 3428019 PMID 22281772 Wikidata Q28090939 Ryan R Brinkman Melanie Courtot Dirk Derom et al 22 June 2010 Modeling biomedical experimental processes with OBI Journal of Biomedical Semantics 1 Suppl 1 Suppl 1 S7 doi 10 1186 2041 1480 1 S1 S7 ISSN 2041 1480 PMC 2903726 PMID 20626927 Wikidata Q28287823 Retrieved from https en wikipedia org w index php title Susanna Assunta Sansone amp oldid 1188866340, wikipedia, wiki, book, books, library,

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