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Minimum information about a microarray experiment

Minimum information about a microarray experiment (MIAME) is a standard created by the FGED Society for reporting microarray experiments.[1]

MIAME is intended to specify all the information necessary to interpret the results of the experiment unambiguously and to potentially reproduce the experiment. While the standard defines the content required for compliant reports, it does not specify the format in which this data should be presented. MIAME describes the minimum information required to ensure that microarray data can be easily interpreted and that results derived from its analysis can be independently verified.[2] There are a number of file formats used to represent this data, as well as both public and subscription-based repositories for such experiments.[2] Additionally, software exists to aid the preparation of MIAME-compliant reports.

MIAME revolves around six key components: raw data, normalized data, sample annotations, experimental design, array annotations, and data protocols.

References edit

  1. ^ "MIAME home page". FGED Society website. Retrieved 2012-09-13.
  2. ^ a b Brazma, Alvis; Hingamp, Pascal; Quackenbush, John; Sherlock, Gavin; Spellman, Paul; Stoeckert, Chris; Aach, John; Ansorge, Wilhelm; Ball, Catherine A.; Causton, Helen C.; Gaasterland, Terry; Glenisson, Patrick; Holstege, Frank C.P.; Kim, Irene F.; Markowitz, Victor; Matese, John C.; Parkinson, Helen; Robinson, Alan; Sarkans, Ugis; Schulze-Kremer, Steffen; Stewart, Jason; Taylor, Ronald; Vilo, Jaak; Vingron, Martin (December 2001). "Minimum information about a microarray experiment (MIAME)—toward standards for microarray data". Nature Genetics. 29 (4): 365–371. doi:10.1038/ng1201-365. ISSN 1061-4036. PMID 11726920. S2CID 6994467.

minimum, information, about, microarray, experiment, more, gene, expression, terminology, glossary, gene, expression, terms, this, article, needs, additional, citations, verification, please, help, improve, this, article, adding, citations, reliable, sources, . For more gene expression terminology see Glossary of gene expression terms This article needs additional citations for verification Please help improve this article by adding citations to reliable sources Unsourced material may be challenged and removed Find sources Minimum information about a microarray experiment news newspapers books scholar JSTOR January 2015 Learn how and when to remove this template message Minimum information about a microarray experiment MIAME is a standard created by the FGED Society for reporting microarray experiments 1 MIAME is intended to specify all the information necessary to interpret the results of the experiment unambiguously and to potentially reproduce the experiment While the standard defines the content required for compliant reports it does not specify the format in which this data should be presented MIAME describes the minimum information required to ensure that microarray data can be easily interpreted and that results derived from its analysis can be independently verified 2 There are a number of file formats used to represent this data as well as both public and subscription based repositories for such experiments 2 Additionally software exists to aid the preparation of MIAME compliant reports MIAME revolves around six key components raw data normalized data sample annotations experimental design array annotations and data protocols References edit MIAME home page FGED Society website Retrieved 2012 09 13 a b Brazma Alvis Hingamp Pascal Quackenbush John Sherlock Gavin Spellman Paul Stoeckert Chris Aach John Ansorge Wilhelm Ball Catherine A Causton Helen C Gaasterland Terry Glenisson Patrick Holstege Frank C P Kim Irene F Markowitz Victor Matese John C Parkinson Helen Robinson Alan Sarkans Ugis Schulze Kremer Steffen Stewart Jason Taylor Ronald Vilo Jaak Vingron Martin December 2001 Minimum information about a microarray experiment MIAME toward standards for microarray data Nature Genetics 29 4 365 371 doi 10 1038 ng1201 365 ISSN 1061 4036 PMID 11726920 S2CID 6994467 Retrieved from https en wikipedia org w index php title Minimum information about a microarray experiment amp oldid 1136128140, wikipedia, wiki, book, books, library,

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