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Dual-phase evolution

Dual phase evolution (DPE) is a process that drives self-organization within complex adaptive systems.[1] It arises in response to phase changes within the network of connections formed by a system's components. DPE occurs in a wide range of physical, biological and social systems. Its applications to technology include methods for manufacturing novel materials and algorithms to solve complex problems in computation.

Introduction edit

Dual phase evolution (DPE) is a process that promotes the emergence of large-scale order in complex systems. It occurs when a system repeatedly switches between various kinds of phases, and in each phase different processes act on the components or connections in the system. DPE arises because of a property of graphs and networks: the connectivity avalanche that occurs in graphs as the number of edges increases.[2]

Social networks provide a familiar example. In a social network the nodes of the network are people and the network connections (edges) are relationships or interactions between people. For any individual, social activity alternates between a local phase, in which they interact only with people they already know, and a global phase in which they can interact with a wide pool of people not previously known to them. Historically, these phases have been forced on people by constraints of time and space. People spend most of their time in a local phase and interact only with those immediately around them (family, neighbors, colleagues). However, intermittent activities such as parties, holidays, and conferences involve a shift into a global phase where they can interact with different people they do not know. Different processes dominate each phase. Essentially, people make new social links when in the global phase, and refine or break them (by ceasing contact) while in the local phase.

The DPE mechanism edit

The following features are necessary for DPE to occur.[1]

Underlying network edit

DPE occurs where a system has an underlying network. That is, the system's components form a set of nodes and there are connections (edges) that join them. For example, a family tree is a network in which the nodes are people (with names) and the edges are relationships such as "mother of" or "married to". The nodes in the network can take physical form, such as atoms held together by atomic forces, or they may be dynamic states or conditions, such as positions on a chess board with moves by the players defining the edges.

In mathematical terms (graph theory), a graph   is a set of nodes   and a set of edges  . Each edge   provides a link between a pair of nodes   and  . A network is a graph in which values are assigned to the nodes and/or edges.

Phase shifts edit

Graphs and networks have two phases: disconnected (fragmented) and connected. In the connected phase every node is connected by an edge to at least one other node and for any pair of nodes, there is at least one path (sequence of edges) joining them.

The Erdős–Rényi model shows that random graphs undergo a connectivity avalanche as the density of edges in a graph increases.[2] This avalanche amounts to a sudden phase change in the size of the largest connected subgraph. In effect, a graph has two phases: connected (most nodes are linked by pathways of interaction) and fragmented (nodes are either isolated or form small subgraphs). These are often referred to as global and local phases, respectively.

 
Fragmented graph.
 
Connected graph.

An essential feature of DPE is that the system undergoes repeated shifts between the two phases. In many cases, one phase is the system's normal state and it remains in that phase until shocked into the alternate phase by a disturbance, which may be external in origin.

Selection and variation edit

In each of the two phases, the network is dominated by different processes.[1] In a local phase, the nodes behave as individuals; in the global phase, nodes are affected by interactions with other nodes. Most commonly the two processes at work can be interpreted as variation and selection. Variation refers to new features, which typically appear in one of the two phases. These features may be new nodes, new edges, or new properties of the nodes or edges. Selection here refers to ways in which the features are modified, refined, selected or removed. A simple example would be new edges being added at random in the global phase and edges being selectively removed in the local phase.

System memory edit

The effects of changes in one phase carry over into the other phase. This means that the processes acting in each phase can modify or refine patterns formed in the other phase. For instance, in a social network, if a person makes new acquaintances during a global phase, then some of these new social connections might survive into the local phase to become long-term friends. In this way, DPE can create effects that may be impossible if both processes act at the same time.

Examples edit

DPE has been found to occur in many natural and artificial systems.[3]

Social networks edit

DPE is capable of producing social networks with known topologies, notably small-world networks and scale-free networks.[3]Small world networks, which are common in traditional societies, are a natural consequence of alternating local and global phases: new, long-distance links are formed during the global phase and existing links are reinforced (or removed) during the local phase. The advent of social media has decreased the constraining influence that space used to impose on social communication, so time has become the chief constraint for many people.

The alternation between local and global phases in social networks occurs in many different guises. Some transitions between phases occur regularly, such as the daily cycle of people moving between home and work. This alternation can influence shifts in public opinion.[4] In the absence of social interaction, the uptake of an opinion promoted by media is a Markov process. The effect of social interaction under DPE is to retard the initial uptake until the number converted reaches a critical point, after which uptake accelerates rapidly.

Socio-economics edit

DPE models of socio-economics interpret the economy as networks of economic agents.[5] Several studies have examined the way socioeconomics evolve when DPE acts on different parts of the network. One model[6] interpreted society as a network of occupations with inhabitants matched to those occupations. In this model social dynamics become a process of DPE within the network, with regular transitions between a development phase, during which the network settles into an equilibrium state, and a mutating phase, during which the network is transformed in random ways by the creation of new occupations.

Another model[7] interpreted growth and decline in socioeconomic activity as a conflict between cooperators and defectors. The cooperators form networks that lead to prosperity. However, the network is unstable and invasions by defectors intermittently fragment the network, reducing prosperity, until invasions of new cooperators rebuild networks again. Thus prosperity is seen as a dual phase process of alternating highly prosperous, connected phases and unprosperous, fragmented phases.

Forest ecology edit

In a forest, the landscape can be regarded as a network of sites where trees might grow.[8] Some sites are occupied by living trees; others sites are empty. In the local phase, sites free of trees are few and they are surrounded by forest, so the network of free sites is fragmented. In competition for these free sites, local seed sources have a massive advantage, and seeds from distant trees are virtually excluded.[1] Major fires (or other disturbances) clear away large tracts of land, so the network of free sites becomes connected and the landscape enters a global phase. In the global phase, competition for free sites is reduced, so the main competitive advantage is adaptation to the environment.

Most of the time a forest is in the local phase, as described above. The net effect is that established tree populations largely exclude invading species.[9] Even if a few isolated trees do find free ground, their population is prevented from expanding by established populations, even if the invaders are better adapted to the local environment. A fire in such conditions leads to an explosion of the invading population, and possibly to a sudden change in the character of the entire forest.

This dual phase process in the landscape explains the consistent appearance of pollen zones in the postglacial forest history of North America, Europe, as well as the suppression of widespread taxa, such as beech and hemlock, followed by huge population explosions. Similar patterns, pollen zones truncated by fire-induced boundaries, have been recorded in most parts of the world

Search algorithms edit

Dual phase evolution is a family of search algorithms that exploit phase changes in the search space to mediate between local and global search. In this way they control the way algorithms explore a search space, so they can be regarded as a family of metaheuristic methods.

Problems such as optimization can typically be interpreted as finding the tallest peak (optimum) within a search space of possibilities. The task can be approached in two ways: local search (e.g. hill climbing) involves tracing a path from point to point, and always moving "uphill". Global search involves sampling at wide-ranging points in the search space to find high points.

Many search algorithms involve a transition between phases of global search and local search.[3] A simple example is the Great Deluge algorithm in which the searcher can move at random across the landscape, but cannot enter low-lying areas that are flooded. At first the searcher can wander freely, but rising water levels eventually confine the search to a local area. Many other nature-inspired algorithms adopt similar approaches. Simulated annealing achieves a transition between phases via its cooling schedule. The cellular genetic algorithm places solutions in a pseudo landscape in which they breed only with local neighbours. Intermittent disasters clear patches, flipping the system into a global phase until gaps are filled again.

Some variations on the memetic algorithm involve alternating between selection at different levels. These are related to the Baldwin effect, which arises when processes acting on phenotypes (e.g. learning) influence selection at the level of genotypes. In this sense, the Baldwin effect alternates between global search (genotypes) and local search (phenotypes).

Related processes edit

Dual phase evolution is related to the well-known phenomenon of self-organized criticality (SOC). Both concern processes in which critical phase changes promote adaptation and organization within a system. However, SOC differs from DPE in several fundamental ways.[1] Under SOC, a system's natural condition is to be in a critical state; in DPE a system's natural condition is a non-critical state. In SOC the size of disturbances follows a power law; in DPE disturbances are not necessarily distributed the same way. In SOC a system is not necessarily subject to other processes; in DPE different processes (e.g. selection and variation) operate in the two phases.

References edit

  1. ^ a b c d e Green, D.G.; Liu, J. & Abbass, H. (2014). Dual Phase Evolution: from Theory to Practice. Berlin: Springer. ISBN 978-1441984227.
  2. ^ a b Erdős, P. & Rényi, A. (1960). "On the evolution of random graphs" (PDF). Publications of the Mathematical Institute of the Hungarian Academy of Sciences. 5: 17–61.
  3. ^ a b c Paperin, G.; Green, D.G. & Sadedin, S. (2011). "Dual Phase Evolution in Complex Adaptive Systems". Journal of the Royal Society Interface. 8 (58): 609–629. doi:10.1098/rsif.2010.0719. PMC 3061102. PMID 21247947.
  4. ^ Stocker, R.; Cornforth, D. & Green, D.G. (2003). "A simulation of the impact of media on social cohesion". Advances in Complex Systems. 6 (3): 349–359. doi:10.1142/S0219525903000931.
  5. ^ Goodman, J. (2014). "Evidence for ecological learning and domain specificity in rational asset pricing and market efficiency" (PDF). The Journal of Socio-Economics. 48: 27–39. doi:10.1016/j.socec.2013.10.002.
  6. ^ Xu, G.; Yang, J. & Li, G. (2013). "Simulating society transitions: standstill, collapse and growth in an evolving network model". PLOS ONE. 8 (9): e75433. Bibcode:2013PLoSO...875433X. doi:10.1371/journal.pone.0075433. PMC 3783390. PMID 24086530.
  7. ^ Cavaliere, M.; Sedwards, C.; Tarnita, C.E.; Nowak, M.A. & Csikász-Nagy, A. (2012). "Prosperity is associated with instability in dynamical networks". Journal of Theoretical Biology. 299: 126–138. arXiv:1102.4947. Bibcode:2012JThBi.299..126C. doi:10.1016/j.jtbi.2011.09.005. PMC 3298632. PMID 21983567.
  8. ^ Green, David G. (1994). "Connectivity and complexity in ecological systems". Pacific Conservation Biology. 1 (3): 194–200. doi:10.1071/PC940194.
  9. ^ Green, David G (1982). "Fire and stability in the postglacial forests of southwest Nova Scotia". Journal of Biogeography. 9 (1): 29–40. doi:10.2307/2844728. JSTOR 2844728.

dual, phase, evolution, this, article, multiple, issues, please, help, improve, discuss, these, issues, talk, page, learn, when, remove, these, template, messages, this, article, needs, additional, citations, verification, please, help, improve, this, article,. This article has multiple issues Please help improve it or discuss these issues on the talk page Learn how and when to remove these template messages This article needs additional citations for verification Please help improve this article by adding citations to reliable sources Unsourced material may be challenged and removed Find sources Dual phase evolution news newspapers books scholar JSTOR May 2015 Learn how and when to remove this template message This article may be too technical for most readers to understand Please help improve it to make it understandable to non experts without removing the technical details May 2015 Learn how and when to remove this template message Learn how and when to remove this template message Dual phase evolution DPE is a process that drives self organization within complex adaptive systems 1 It arises in response to phase changes within the network of connections formed by a system s components DPE occurs in a wide range of physical biological and social systems Its applications to technology include methods for manufacturing novel materials and algorithms to solve complex problems in computation Contents 1 Introduction 2 The DPE mechanism 2 1 Underlying network 2 2 Phase shifts 2 3 Selection and variation 2 4 System memory 3 Examples 3 1 Social networks 3 2 Socio economics 3 3 Forest ecology 3 4 Search algorithms 4 Related processes 5 ReferencesIntroduction editDual phase evolution DPE is a process that promotes the emergence of large scale order in complex systems It occurs when a system repeatedly switches between various kinds of phases and in each phase different processes act on the components or connections in the system DPE arises because of a property of graphs and networks the connectivity avalanche that occurs in graphs as the number of edges increases 2 Social networks provide a familiar example In a social network the nodes of the network are people and the network connections edges are relationships or interactions between people For any individual social activity alternates between a local phase in which they interact only with people they already know and a global phase in which they can interact with a wide pool of people not previously known to them Historically these phases have been forced on people by constraints of time and space People spend most of their time in a local phase and interact only with those immediately around them family neighbors colleagues However intermittent activities such as parties holidays and conferences involve a shift into a global phase where they can interact with different people they do not know Different processes dominate each phase Essentially people make new social links when in the global phase and refine or break them by ceasing contact while in the local phase The DPE mechanism editThe following features are necessary for DPE to occur 1 Underlying network edit DPE occurs where a system has an underlying network That is the system s components form a set of nodes and there are connections edges that join them For example a family tree is a network in which the nodes are people with names and the edges are relationships such as mother of or married to The nodes in the network can take physical form such as atoms held together by atomic forces or they may be dynamic states or conditions such as positions on a chess board with moves by the players defining the edges In mathematical terms graph theory a graph G N E displaystyle textstyle G langle N E rangle nbsp is a set of nodes N displaystyle textstyle N nbsp and a set of edges E x y x y N displaystyle textstyle E subset x y mid x y in N nbsp Each edge x y displaystyle textstyle x y nbsp provides a link between a pair of nodes x displaystyle textstyle x nbsp and y displaystyle textstyle y nbsp A network is a graph in which values are assigned to the nodes and or edges Phase shifts edit Graphs and networks have two phases disconnected fragmented and connected In the connected phase every node is connected by an edge to at least one other node and for any pair of nodes there is at least one path sequence of edges joining them The Erdos Renyi model shows that random graphs undergo a connectivity avalanche as the density of edges in a graph increases 2 This avalanche amounts to a sudden phase change in the size of the largest connected subgraph In effect a graph has two phases connected most nodes are linked by pathways of interaction and fragmented nodes are either isolated or form small subgraphs These are often referred to as global and local phases respectively nbsp Fragmented graph nbsp Connected graph An essential feature of DPE is that the system undergoes repeated shifts between the two phases In many cases one phase is the system s normal state and it remains in that phase until shocked into the alternate phase by a disturbance which may be external in origin Selection and variation edit In each of the two phases the network is dominated by different processes 1 In a local phase the nodes behave as individuals in the global phase nodes are affected by interactions with other nodes Most commonly the two processes at work can be interpreted as variation and selection Variation refers to new features which typically appear in one of the two phases These features may be new nodes new edges or new properties of the nodes or edges Selection here refers to ways in which the features are modified refined selected or removed A simple example would be new edges being added at random in the global phase and edges being selectively removed in the local phase System memory edit The effects of changes in one phase carry over into the other phase This means that the processes acting in each phase can modify or refine patterns formed in the other phase For instance in a social network if a person makes new acquaintances during a global phase then some of these new social connections might survive into the local phase to become long term friends In this way DPE can create effects that may be impossible if both processes act at the same time Examples editDPE has been found to occur in many natural and artificial systems 3 Social networks edit DPE is capable of producing social networks with known topologies notably small world networks and scale free networks 3 Small world networks which are common in traditional societies are a natural consequence of alternating local and global phases new long distance links are formed during the global phase and existing links are reinforced or removed during the local phase The advent of social media has decreased the constraining influence that space used to impose on social communication so time has become the chief constraint for many people The alternation between local and global phases in social networks occurs in many different guises Some transitions between phases occur regularly such as the daily cycle of people moving between home and work This alternation can influence shifts in public opinion 4 In the absence of social interaction the uptake of an opinion promoted by media is a Markov process The effect of social interaction under DPE is to retard the initial uptake until the number converted reaches a critical point after which uptake accelerates rapidly Socio economics edit DPE models of socio economics interpret the economy as networks of economic agents 5 Several studies have examined the way socioeconomics evolve when DPE acts on different parts of the network One model 6 interpreted society as a network of occupations with inhabitants matched to those occupations In this model social dynamics become a process of DPE within the network with regular transitions between a development phase during which the network settles into an equilibrium state and a mutating phase during which the network is transformed in random ways by the creation of new occupations Another model 7 interpreted growth and decline in socioeconomic activity as a conflict between cooperators and defectors The cooperators form networks that lead to prosperity However the network is unstable and invasions by defectors intermittently fragment the network reducing prosperity until invasions of new cooperators rebuild networks again Thus prosperity is seen as a dual phase process of alternating highly prosperous connected phases and unprosperous fragmented phases Forest ecology edit In a forest the landscape can be regarded as a network of sites where trees might grow 8 Some sites are occupied by living trees others sites are empty In the local phase sites free of trees are few and they are surrounded by forest so the network of free sites is fragmented In competition for these free sites local seed sources have a massive advantage and seeds from distant trees are virtually excluded 1 Major fires or other disturbances clear away large tracts of land so the network of free sites becomes connected and the landscape enters a global phase In the global phase competition for free sites is reduced so the main competitive advantage is adaptation to the environment Most of the time a forest is in the local phase as described above The net effect is that established tree populations largely exclude invading species 9 Even if a few isolated trees do find free ground their population is prevented from expanding by established populations even if the invaders are better adapted to the local environment A fire in such conditions leads to an explosion of the invading population and possibly to a sudden change in the character of the entire forest This dual phase process in the landscape explains the consistent appearance of pollen zones in the postglacial forest history of North America Europe as well as the suppression of widespread taxa such as beech and hemlock followed by huge population explosions Similar patterns pollen zones truncated by fire induced boundaries have been recorded in most parts of the world Search algorithms edit Dual phase evolution is a family of search algorithms that exploit phase changes in the search space to mediate between local and global search In this way they control the way algorithms explore a search space so they can be regarded as a family of metaheuristic methods Problems such as optimization can typically be interpreted as finding the tallest peak optimum within a search space of possibilities The task can be approached in two ways local search e g hill climbing involves tracing a path from point to point and always moving uphill Global search involves sampling at wide ranging points in the search space to find high points Many search algorithms involve a transition between phases of global search and local search 3 A simple example is the Great Deluge algorithm in which the searcher can move at random across the landscape but cannot enter low lying areas that are flooded At first the searcher can wander freely but rising water levels eventually confine the search to a local area Many other nature inspired algorithms adopt similar approaches Simulated annealing achieves a transition between phases via its cooling schedule The cellular genetic algorithm places solutions in a pseudo landscape in which they breed only with local neighbours Intermittent disasters clear patches flipping the system into a global phase until gaps are filled again Some variations on the memetic algorithm involve alternating between selection at different levels These are related to the Baldwin effect which arises when processes acting on phenotypes e g learning influence selection at the level of genotypes In this sense the Baldwin effect alternates between global search genotypes and local search phenotypes Related processes editDual phase evolution is related to the well known phenomenon of self organized criticality SOC Both concern processes in which critical phase changes promote adaptation and organization within a system However SOC differs from DPE in several fundamental ways 1 Under SOC a system s natural condition is to be in a critical state in DPE a system s natural condition is a non critical state In SOC the size of disturbances follows a power law in DPE disturbances are not necessarily distributed the same way In SOC a system is not necessarily subject to other processes in DPE different processes e g selection and variation operate in the two phases References edit a b c d e Green D G Liu J amp Abbass H 2014 Dual Phase Evolution from Theory to Practice Berlin Springer ISBN 978 1441984227 a b Erdos P amp Renyi A 1960 On the evolution of random graphs PDF Publications of the Mathematical Institute of the Hungarian Academy of Sciences 5 17 61 a b c Paperin G Green D G amp Sadedin S 2011 Dual Phase Evolution in Complex Adaptive Systems Journal of the Royal Society Interface 8 58 609 629 doi 10 1098 rsif 2010 0719 PMC 3061102 PMID 21247947 Stocker R Cornforth D amp Green D G 2003 A simulation of the impact of media on social cohesion Advances in Complex Systems 6 3 349 359 doi 10 1142 S0219525903000931 Goodman J 2014 Evidence for ecological learning and domain specificity in rational asset pricing and market efficiency PDF The Journal of Socio Economics 48 27 39 doi 10 1016 j socec 2013 10 002 Xu G Yang J amp Li G 2013 Simulating society transitions standstill collapse and growth in an evolving network model PLOS ONE 8 9 e75433 Bibcode 2013PLoSO 875433X doi 10 1371 journal pone 0075433 PMC 3783390 PMID 24086530 Cavaliere M Sedwards C Tarnita C E Nowak M A amp Csikasz Nagy A 2012 Prosperity is associated with instability in dynamical networks Journal of Theoretical Biology 299 126 138 arXiv 1102 4947 Bibcode 2012JThBi 299 126C doi 10 1016 j jtbi 2011 09 005 PMC 3298632 PMID 21983567 Green David G 1994 Connectivity and complexity in ecological systems Pacific Conservation Biology 1 3 194 200 doi 10 1071 PC940194 Green David G 1982 Fire and stability in the postglacial forests of southwest Nova Scotia Journal of Biogeography 9 1 29 40 doi 10 2307 2844728 JSTOR 2844728 Retrieved from https en wikipedia org w index php title Dual phase evolution amp oldid 1176682861, wikipedia, wiki, book, books, library,

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