comparison, force, field, implementations, this, table, notable, computer, programs, implementing, molecular, mechanics, force, fields, program, opls, amber, charmm, gaff, mmff, qvbmm, commentsabalone, 99sb, automatic, generator, dreiding, like, field, protein. This is a table of notable computer programs implementing molecular mechanics force fields Program OPLS AMBER CHARMM GAFF MMFF QVBMM UFF CommentsAbalone UA 94 96 99SB 03 GS ii Automatic FF generator 1 No No No No UFF Dreiding like field For proteins DNA ligandsAMBER Yes Yes Via chamber tool since v11 Yes No No NoAscalaph Designer UA 94 99SB 03 No No No No NoAvogadro No No No Yes 94 94s No YesBalloon No No No No 94 No No MMFF94 likeBOSS Yes No No No No No NoCHARMM Yes Yes Yes Via CHARMM GUI 2 Full MMFF94 but code rumored unmaintained No No in standard distributionGabedit No Yes No Yes Yes No NoGaussian mm utility No Yes No No No No Yes Dreiding field availableGROMACS Yes Yes Yes Yes No No No in standard distribution since v4 5 0MOE AA 89 94 99 also with Extended Huckel Theory 22 27 No 94 s No NoNAMD Yes Yes Yes Yes No No NoQ Yes Yes Yes No No No No For biopolymersTinker UA AA AA L 94 96 98 99 19 27 No 94 No No For proteins organic moleculesTowhee UA AA 86 19 22 27 No 94 No Yes Monte CarloYasara No 94 96 99 03 No No No No No Plus custom fields for hires refinementSee also EditForce field chemistry List of software for Monte Carlo molecular modeling Molecular mechanics Molecular design software Molecule editor Comparison of software for molecular mechanics modeling Molecular modeling on GPUReferences Edit Automatic Force Field generator CHARMM GUI Retrieved from https en wikipedia org w index php title Comparison of force field implementations amp oldid 1150632183, wikipedia, wiki, book, books, library,
