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COSMO-RS

COSMO-RS (short for COnductor like Screening MOdel for Real Solvents)[1][2][3] is a quantum chemistry based equilibrium thermodynamics method with the purpose of predicting chemical potentials μ in liquids. It processes the screening charge density σ on the surface of molecules to calculate the chemical potential μ of each species in solution. Perhaps in dilute solution a constant potential must be considered. As an initial step a quantum chemical COSMO[4] calculation for all molecules is performed and the results (e.g. the screening charge density) are stored in a database. In a separate step COSMO-RS uses the stored COSMO results to calculate the chemical potential of the molecules in a liquid solvent or mixture. The resulting chemical potentials are the basis for other thermodynamic equilibrium properties such as activity coefficients, solubility, partition coefficients, vapor pressure and free energy of solvation. The method was developed to provide a general prediction method with no need for system specific adjustment.

Due to the use of σ from COSMO calculations, COSMO-RS does not require functional group parameters. Quantum chemical effects like group-group interactions, mesomeric effects and inductive effects also are incorporated into COSMO-RS by this approach.

The COSMO-RS method was first published in 1995 by A. Klamt.[1] A refined version of COSMO-RS was published in 1998 [5] and is the basis for newer developments and reimplementations.[6][7][8][9][10]

Basic principles edit

The below description is a simplified overview of the COSMO-RS version published in 1998.

Assumptions edit

Screening charge density of water as calculated by the COSMO method.
 
σ-profile of water; the basic input for COSMO-RS
  1. The liquid state is incompressible
  2. All parts of the molecular surfaces can be in contact with each other
  3. Only pairwise interactions of molecular surface patches are allowed

As long as the above assumptions hold, the chemical potential μ in solution can be calculated from the interaction energies of pairwise surface contacts.

COSMO-RS equations edit

Within the basic formulation of COSMO-RS, interaction terms depend on the screening charge density σ. Each molecule and mixture can be represented by the histogram p(σ), the so-called σ-profile. The σ-profile of a mixture is the weighted sum of the profiles of all its components. Using the interaction energy Eint(σ,σ') and the σ-profile of the solvent p(σ'), the chemical potential μs(σ) of a surface piece with screening charge σ is determined as:

 

Due to the fact that μs(σ) is present on both sides of the equation, it needs to be solved iteratively. By combining the above equation with px(σ) for a solute x, and adding the σ-independent combinatorial and dispersive contributions, the chemical potential for a solute X in a solvent S results in:

 

In analogy to activity coefficient models used in chemical engineering, such as NRTL, UNIQUAC or UNIFAC, the final chemical potential can be split into a combinatorial and a residual (non ideal) contribution. The interaction energies Eint(σ,σ') of two surface pieces are the crucial part for the final performance of the method and different formulations are used within the various implementations. In addition to the liquid phase terms a chemical potential estimate for the ideal gas phase μgas has been added to COSMO-RS to enable the prediction of vapor pressure, free energy of solvation and related quantities.

Interaction energy (Residual) edit

The residual part is the sum of three different contributions, where Emisfit and Ehb are part of Eint and Edisp is added directly to the chemical potential.

Electrostatic interaction edit

 

In the Emisfit expression α is an adjustable parameter and σ and σ' refer to the screening charge densities of the two surface patches in contact. This term has been labeled "misfit" energy, because it results from the mismatch of the charged surface pieces in contact. It represents the Coulomb interaction relative to the state in a perfect conductor. A molecule in a perfect conductor (COSMO state) is perfectly shielded electronically; each charge on the molecular surface is shielded by a charge of the same size but of opposite sign. If the conductor is replaced by surface pieces of contacting molecules the screening of the surface will not be perfect any more. Hence an interaction energy from this misfit of σ on the surface patches will arise.

Hydrogen bonding energy edit

 

In the Ehb expression σacc and σdon are the screening charge densities of the hydrogen bond acceptor and donor respectively. The hydrogen bonding threshold σhb and the prefactor chb are adjustable parameters. The max[] and min[] construction ensures that the screening charge densities of the acceptor and donor exceeds the threshold for hydrogen bonding.

Dispersion (van der Waals energy) edit

 

The COSMO-RS dispersion energy of a solute depends on an element (k) specific prefactor γ and the amount of exposed surface A of this element. It is not part of the interaction energy but enters the chemical potential directly.

Parameters edit

Though the use of quantum chemistry reduces the need for adjustable parameters, some fitting to experimental data is inevitable. The basic parameters are α, chb, σhb as used in the interaction energies, and one general parameter for the effective contact area. In addition, one adjustable van der Waals parameter γ per element is required. All parameters either are general or element specific, which is a distinctive feature of COSMO-RS as compared to group contribution methods like UNIFAC.

Implementations edit

The original streamline of COSMO-RS was continuously developed and extended by A. Klamt in his company COSMOlogic (now part of BIOVIA), and the most advanced software for COSMO-RS is the COSMOtherm software, now available from BIOVIA. They also offer a huge database (COSMObase) with more than 12000 COSMO files. COSMOtherm proved its prediction accuracy by delivering the most accurate physicochemical property predictions in the recent SAMPL5 and SAMPL6 challenges.

LVPP maintains an open sigma-profile database with COSMO-SAC ("Segment Activity Coefficient") parameterizations.[11][12]

Gaussian (software) cannot compute σ-profiles, but can produce .cosmo input files for COSMO-RS/Cosmotherm via the keyword scrf=COSMORS.

SCM licenses a commercial COSMO-RS implementation in the Amsterdam Modeling Suite, which also includes COSMO-SAC, UNIFAC and QSPR models.[13]

See also edit

References edit

  1. ^ a b "Conductor-like Screening Model for Real Solvents: A New Approach to the Quantitative Calculation of Solvation Phenomena", A. Klamt, J. Phys. Chem., 99, 2224-2235 (1995), DOI: 10.1021/j100007a062
  2. ^ Klamt, Andreas. (2007). COSMO-RS : from quantum chemistry to fluid phase thermodynamics and drug design. Elsevier. ISBN 978-0-08-045553-2. OCLC 1226672539.
  3. ^ Klamt, Andreas; Eckert, Frank; Arlt, Wolfgang (2010-06-15). "COSMO-RS: An Alternative to Simulation for Calculating Thermodynamic Properties of Liquid Mixtures". Annual Review of Chemical and Biomolecular Engineering. 1 (1): 101–122. doi:10.1146/annurev-chembioeng-073009-100903. ISSN 1947-5438. PMID 22432575.
  4. ^ "COSMO: A New Approach to Dielectric Screening in Solvents with Explicit Expressions for the Screening Energy and its Gradient", A. Klamt and G. Schüürmann, J. Chem. Soc. Perkin Trans. II 799-805 (1993) doi:10.1039/P29930000799
  5. ^ "Refinement and Parametrization of COSMO-RS", A. Klamt, V. Jonas, T. Bürger and J. C. W. Lohrenz, J. Phys. Chem. A 102, 5074-5085 (1998), doi:10.1021/jp980017s
  6. ^ "A Priori Phase Equilibrium Prediction from a Segment Contribution Solvation Model", S.-T. Lin and S.I. Sandler, Ind. Eng. Chem. Res., 41 (5), 899–913 (2002), doi:10.1021/ie001047w
  7. ^ "Performance of a Conductor-Like Screening Model for Real Solvents Model in Comparison to Classical Group Contribution Methods", H. Grensemann and J. Gmehling, Ind. Eng. Chem. Res., 44 (5), 1610–1624 (2005), doi:10.1021/ie049139z
  8. ^ "Infinite Dilution Activity Coefficients for Trihexyltetradecyl Phosphonium Ionic Liquids: Measurements and COSMO-RS Prediction", T. Banerjee and A. Khanna, J. Chem. Eng. Data, 51 (6), 2170–2177 (2006), doi:10.1021/je0602925
  9. ^ "An implementation of the conductor-like screening model of solvation within the Amsterdam density functional package. Part II. COSMO for real solvents", C.C. Pye, T. Ziegler, E. van Lenthe, J.N. Louwen, Can. J. Chem. 87, 790 (2009), doi:10.1139/V09-008
  10. ^ "On the influence of basis sets and quantum chemical methods on the prediction accuracy of COSMO-RS", R. Franke, B. Hannebauer, Phys. Chem. Chem. Phys., 13, 21344-21350 (2011), doi:10.1039/C1CP22317H
  11. ^ "LVPP sigma-profile database + COSMO-SAC parametrizations: lvpp/sigma". LVPP. 30 October 2019. Retrieved 6 November 2019.
  12. ^ Ferrarini, F.; Flôres, G. B.; Muniz, A. R.; Soares, R. P. de (2018). "An open and extensible sigma-profile database for COSMO-based models". AIChE Journal. 64 (9): 3443–3455. doi:10.1002/aic.16194. ISSN 1547-5905. S2CID 103011443.
  13. ^ "COSMO-RS: predict activity coefficients, logP, VLE from DFT data". Software for Chemistry & Materials. Retrieved 6 November 2019.

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COSMO RS short for COnductor like Screening MOdel for Real Solvents 1 2 3 is a quantum chemistry based equilibrium thermodynamics method with the purpose of predicting chemical potentials m in liquids It processes the screening charge density s on the surface of molecules to calculate the chemical potential m of each species in solution Perhaps in dilute solution a constant potential must be considered As an initial step a quantum chemical COSMO 4 calculation for all molecules is performed and the results e g the screening charge density are stored in a database In a separate step COSMO RS uses the stored COSMO results to calculate the chemical potential of the molecules in a liquid solvent or mixture The resulting chemical potentials are the basis for other thermodynamic equilibrium properties such as activity coefficients solubility partition coefficients vapor pressure and free energy of solvation The method was developed to provide a general prediction method with no need for system specific adjustment Due to the use of s from COSMO calculations COSMO RS does not require functional group parameters Quantum chemical effects like group group interactions mesomeric effects and inductive effects also are incorporated into COSMO RS by this approach The COSMO RS method was first published in 1995 by A Klamt 1 A refined version of COSMO RS was published in 1998 5 and is the basis for newer developments and reimplementations 6 7 8 9 10 Contents 1 Basic principles 1 1 Assumptions 1 2 COSMO RS equations 1 3 Interaction energy Residual 1 3 1 Electrostatic interaction 1 3 2 Hydrogen bonding energy 1 3 3 Dispersion van der Waals energy 1 4 Parameters 2 Implementations 3 See also 4 ReferencesBasic principles editThe below description is a simplified overview of the COSMO RS version published in 1998 Assumptions edit source source source Screening charge density of water as calculated by the COSMO method nbsp s profile of water the basic input for COSMO RS The liquid state is incompressible All parts of the molecular surfaces can be in contact with each other Only pairwise interactions of molecular surface patches are allowed As long as the above assumptions hold the chemical potential m in solution can be calculated from the interaction energies of pairwise surface contacts COSMO RS equations edit Within the basic formulation of COSMO RS interaction terms depend on the screening charge density s Each molecule and mixture can be represented by the histogram p s the so called s profile The s profile of a mixture is the weighted sum of the profiles of all its components Using the interaction energy Eint s s and the s profile of the solvent p s the chemical potential ms s of a surface piece with screening charge s is determined as m s s k T ln p s s e E i n t s s m s s k T d s displaystyle mu s sigma kT ln int p s sigma e frac E int sigma sigma mu s sigma kT d sigma nbsp Due to the fact that ms s is present on both sides of the equation it needs to be solved iteratively By combining the above equation with px s for a solute x and adding the s independent combinatorial and dispersive contributions the chemical potential for a solute X in a solvent S results in m s x m c o m b x E d i s p p x s m s s d s displaystyle mu s x mu comb x E disp int p x sigma mu s sigma d sigma nbsp In analogy to activity coefficient models used in chemical engineering such as NRTL UNIQUAC or UNIFAC the final chemical potential can be split into a combinatorial and a residual non ideal contribution The interaction energies Eint s s of two surface pieces are the crucial part for the final performance of the method and different formulations are used within the various implementations In addition to the liquid phase terms a chemical potential estimate for the ideal gas phase mgas has been added to COSMO RS to enable the prediction of vapor pressure free energy of solvation and related quantities Interaction energy Residual edit The residual part is the sum of three different contributions where Emisfit and Ehb are part of Eint and Edisp is added directly to the chemical potential Electrostatic interaction edit E m i s f i t s a 2 s s 2 displaystyle E misfit sigma frac alpha 2 sigma sigma 2 nbsp In the Emisfit expression a is an adjustable parameter and s and s refer to the screening charge densities of the two surface patches in contact This term has been labeled misfit energy because it results from the mismatch of the charged surface pieces in contact It represents the Coulomb interaction relative to the state in a perfect conductor A molecule in a perfect conductor COSMO state is perfectly shielded electronically each charge on the molecular surface is shielded by a charge of the same size but of opposite sign If the conductor is replaced by surface pieces of contacting molecules the screening of the surface will not be perfect any more Hence an interaction energy from this misfit of s on the surface patches will arise Hydrogen bonding energy edit E h b s c h b T max 0 s a c c s h b min 0 s d o n s h b displaystyle E hb sigma c hb T max 0 sigma acc sigma hb min 0 sigma don sigma hb nbsp In the Ehb expression sacc and sdon are the screening charge densities of the hydrogen bond acceptor and donor respectively The hydrogen bonding threshold shb and the prefactor chb are adjustable parameters The max and min construction ensures that the screening charge densities of the acceptor and donor exceeds the threshold for hydrogen bonding Dispersion van der Waals energy edit E d i s p k g k A k displaystyle E disp sum k gamma k A k nbsp The COSMO RS dispersion energy of a solute depends on an element k specific prefactor g and the amount of exposed surface A of this element It is not part of the interaction energy but enters the chemical potential directly Parameters edit Though the use of quantum chemistry reduces the need for adjustable parameters some fitting to experimental data is inevitable The basic parameters are a chb shb as used in the interaction energies and one general parameter for the effective contact area In addition one adjustable van der Waals parameter g per element is required All parameters either are general or element specific which is a distinctive feature of COSMO RS as compared to group contribution methods like UNIFAC Implementations editThe original streamline of COSMO RS was continuously developed and extended by A Klamt in his company COSMOlogic now part of BIOVIA and the most advanced software for COSMO RS is the COSMOtherm software now available from BIOVIA They also offer a huge database COSMObase with more than 12000 COSMO files COSMOtherm proved its prediction accuracy by delivering the most accurate physicochemical property predictions in the recent SAMPL5 and SAMPL6 challenges LVPP maintains an open sigma profile database with COSMO SAC Segment Activity Coefficient parameterizations 11 12 Gaussian software cannot compute s profiles but can produce cosmo input files for COSMO RS Cosmotherm via the keyword scrf COSMORS SCM licenses a commercial COSMO RS implementation in the Amsterdam Modeling Suite which also includes COSMO SAC UNIFAC and QSPR models 13 See also editUNIFAC UNIQUAC MOSCED NRTLReferences edit a b Conductor like Screening Model for Real Solvents A New Approach to the Quantitative Calculation of Solvation Phenomena A Klamt J Phys Chem 99 2224 2235 1995 DOI 10 1021 j100007a062 Klamt Andreas 2007 COSMO RS from quantum chemistry to fluid phase thermodynamics and drug design Elsevier ISBN 978 0 08 045553 2 OCLC 1226672539 Klamt Andreas Eckert Frank Arlt Wolfgang 2010 06 15 COSMO RS An Alternative to Simulation for Calculating Thermodynamic Properties of Liquid Mixtures Annual Review of Chemical and Biomolecular Engineering 1 1 101 122 doi 10 1146 annurev chembioeng 073009 100903 ISSN 1947 5438 PMID 22432575 COSMO A New Approach to Dielectric Screening in Solvents with Explicit Expressions for the Screening Energy and its Gradient A Klamt and G Schuurmann J Chem Soc Perkin Trans II 799 805 1993 doi 10 1039 P29930000799 Refinement and Parametrization of COSMO RS A Klamt V Jonas T Burger and J C W Lohrenz J Phys Chem A 102 5074 5085 1998 doi 10 1021 jp980017s A Priori Phase Equilibrium Prediction from a Segment Contribution Solvation Model S T Lin and S I Sandler Ind Eng Chem Res 41 5 899 913 2002 doi 10 1021 ie001047w Performance of a Conductor Like Screening Model for Real Solvents Model in Comparison to Classical Group Contribution Methods H Grensemann and J Gmehling Ind Eng Chem Res 44 5 1610 1624 2005 doi 10 1021 ie049139z Infinite Dilution Activity Coefficients for Trihexyltetradecyl Phosphonium Ionic Liquids Measurements and COSMO RS Prediction T Banerjee and A Khanna J Chem Eng Data 51 6 2170 2177 2006 doi 10 1021 je0602925 An implementation of the conductor like screening model of solvation within the Amsterdam density functional package Part II COSMO for real solvents C C Pye T Ziegler E van Lenthe J N Louwen Can J Chem 87 790 2009 doi 10 1139 V09 008 On the influence of basis sets and quantum chemical methods on the prediction accuracy of COSMO RS R Franke B Hannebauer Phys Chem Chem Phys 13 21344 21350 2011 doi 10 1039 C1CP22317H LVPP sigma profile database COSMO SAC parametrizations lvpp sigma LVPP 30 October 2019 Retrieved 6 November 2019 Ferrarini F Flores G B Muniz A R Soares R P de 2018 An open and extensible sigma profile database for COSMO based models AIChE Journal 64 9 3443 3455 doi 10 1002 aic 16194 ISSN 1547 5905 S2CID 103011443 COSMO RS predict activity coefficients logP VLE from DFT data Software for Chemistry amp Materials Retrieved 6 November 2019 Retrieved from https en wikipedia org w index php title COSMO RS amp oldid 1220744267, wikipedia, wiki, book, books, library,

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